Literature DB >> 17391365

Wangia profunda gen. nov., sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from southern Okinawa Trough deep-sea sediment.

Qi-Long Qin1, Dian-Li Zhao, Jing Wang, Xiu-Lan Chen, Hong-Yue Dang, Tie-Gang Li, Yu-Zhong Zhang, Pei-Ji Gao.   

Abstract

An orange-pigmented, Gram-negative, nonmotile, strictly aerobic and oxidase- and catalase-positive bacterium (SM-A87(T)) was isolated from the deep-sea sediment of the southern Okinawa Trough area. The main fatty acids were i15 : 0, i17 : 0 3OH, i15 : 1 G, i17 : 1 omega 9c, 15 : 0, i15 : 0 3OH and summed feature 3 (comprising i-15 : 0 2OH and/or 16 : 1 omega 7c). MK-6 was the predominant respiratory quinone. DNA G+C content was 35.8 mol%. Flexirubin-type pigments were absent. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain SM-A87(T) formed a distinct lineage within the family Flavobacteriaceae, with <93% sequence similarity to the nearest strain of genus Salegentibacter. Moreover, strain SM-A87(T) could be distinguished from the nearest phylogenetic neighbors by a number of chemotaxonomic and phenotypic properties. On the basis of polyphasic analyses, it is proposed that strain SM-A87(T) be classified in a novel genus and a new species in the family Flavobacteriaceae, designated Wangia profunda gen. nov., sp. nov. The type strain is SM-A87(T) (CCTCC AB 206139(T)=DSM 18752).

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Year:  2007        PMID: 17391365     DOI: 10.1111/j.1574-6968.2007.00694.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  14 in total

1.  Characterization of bacterial polysaccharide capsules and detection in the presence of deliquescent water by atomic force microscopy.

Authors:  Hai-Nan Su; Zhi-Hua Chen; Sheng-Bo Liu; Li-Ping Qiao; Xiu-Lan Chen; Hai-Lun He; Xian Zhao; Bai-Cheng Zhou; Yu-Zhong Zhang
Journal:  Appl Environ Microbiol       Date:  2012-02-17       Impact factor: 4.792

2.  A novel cold-active and salt-tolerant α-amylase from marine bacterium Zunongwangia profunda: molecular cloning, heterologous expression and biochemical characterization.

Authors:  Yongjun Qin; Zongqing Huang; Ziduo Liu
Journal:  Extremophiles       Date:  2013-12-07       Impact factor: 2.395

3.  Cloning, expression and characterization of a novel cold-active and halophilic xylanase from Zunongwangia profunda.

Authors:  Xiaoshuang Liu; Zongqing Huang; Xiangnan Zhang; Zongze Shao; Ziduo Liu
Journal:  Extremophiles       Date:  2014-01-25       Impact factor: 2.395

4.  Production of cold-adapted amylase by marine bacterium Wangia sp. C52: optimization, modeling, and partial characterization.

Authors:  Jianguo Liu; Zhiqiang Zhang; Zhiqiang Liu; Hu Zhu; Hongyue Dang; Jianren Lu; Zhanfeng Cui
Journal:  Mar Biotechnol (NY)       Date:  2011-03-02       Impact factor: 3.619

5.  Pseudomonas linyingensis sp. nov.: a novel bacterium isolated from wheat soil subjected to long-term herbicides application.

Authors:  Wei-Hong He; Ya-Nan Wang; Xun Du; Yang Zhou; Bin Jia; Jiang Bian; Shuang-Jiang Liu; Guo-Can Chen
Journal:  Curr Microbiol       Date:  2012-08-10       Impact factor: 2.188

6.  Comparative genomics reveals a deep-sea sediment-adapted life style of Pseudoalteromonas sp. SM9913.

Authors:  Qi-Long Qin; Yang Li; Yan-Jiao Zhang; Zhe-Min Zhou; Wei-Xin Zhang; Xiu-Lan Chen; Xi-Ying Zhang; Bai-Cheng Zhou; Lei Wang; Yu-Zhong Zhang
Journal:  ISME J       Date:  2010-08-12       Impact factor: 10.302

7.  The complete genome of Zunongwangia profunda SM-A87 reveals its adaptation to the deep-sea environment and ecological role in sedimentary organic nitrogen degradation.

Authors:  Qi-Long Qin; Xi-Ying Zhang; Xu-Min Wang; Gui-Ming Liu; Xiu-Lan Chen; Bin-Bin Xie; Hong-Yue Dang; Bai-Cheng Zhou; Jun Yu; Yu-Zhong Zhang
Journal:  BMC Genomics       Date:  2010-04-17       Impact factor: 3.969

8.  Zunongwangia flava sp. nov., belonging to the family Flavobacteriaceae, isolated from Salicornia europaea.

Authors:  Eui-Sang Cho; In-Tae Cha; Hak-Jong Choi; Seong Woon Roh; Young-Do Nam; Sung Man Seo; Myung-Ji Seo
Journal:  J Microbiol       Date:  2018-10-25       Impact factor: 3.422

9.  Optimization of fermentation conditions and rheological properties of exopolysaccharide produced by deep-sea bacterium Zunongwangia profunda SM-A87.

Authors:  Sheng-Bo Liu; Li-Ping Qiao; Hai-Lun He; Qian Zhang; Xiu-Lan Chen; Wei-Zhi Zhou; Bai-Cheng Zhou; Yu-Zhong Zhang
Journal:  PLoS One       Date:  2011-11-11       Impact factor: 3.240

10.  Comparative transcriptome analysis reveals that lactose acts as an inducer and provides proper carbon sources for enhancing exopolysaccharide yield in the deep-sea bacterium Zunongwangia profunda SM-A87.

Authors:  Qi-Long Qin; Yi Li; Mei-Ling Sun; Jin-Cheng Rong; Sheng-Bo Liu; Xiu-Lan Chen; Hai-Nan Su; Bai-Cheng Zhou; Bin-Bin Xie; Yu-Zhong Zhang; Xi-Ying Zhang
Journal:  PLoS One       Date:  2015-02-13       Impact factor: 3.240

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