Literature DB >> 22086289

Choosing an effective protein bioconjugation strategy.

Nicholas Stephanopoulos1, Matthew B Francis.   

Abstract

The collection of chemical techniques that can be used to attach synthetic groups to proteins has expanded substantially in recent years. Each of these approaches allows new protein targets to be addressed, leading to advances in biological understanding, new protein-drug conjugates, targeted medical imaging agents and hybrid materials with complex functions. The protein modification reactions in current use vary widely in their inherent site selectivity, overall yields and functional group compatibility. Some are more amenable to large-scale bioconjugate production, and a number of techniques can be used to label a single protein in a complex biological mixture. This review examines the way in which experimental circumstances influence one's selection of an appropriate protein modification strategy. It also provides a simple decision tree that can narrow down the possibilities in many instances. The review concludes with example studies that examine how this decision process has been applied in different contexts.

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Year:  2011        PMID: 22086289     DOI: 10.1038/nchembio.720

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  93 in total

Review 1.  Mechanism-based profiling of enzyme families.

Authors:  Michael J Evans; Benjamin F Cravatt
Journal:  Chem Rev       Date:  2006-08       Impact factor: 60.622

2.  Nucleophilic catalysis of oxime ligation.

Authors:  Anouk Dirksen; Tilman M Hackeng; Philip E Dawson
Journal:  Angew Chem Int Ed Engl       Date:  2006-11-20       Impact factor: 15.336

3.  Dual-surface-modified bacteriophage MS2 as an ideal scaffold for a viral capsid-based drug delivery system.

Authors:  Ernest W Kovacs; Jacob M Hooker; Dante W Romanini; Patrick G Holder; Katherine E Berry; Matthew B Francis
Journal:  Bioconjug Chem       Date:  2007-06-30       Impact factor: 4.774

4.  Oxidative coupling of peptides to a virus capsid containing unnatural amino acids.

Authors:  Zachary M Carrico; Dante W Romanini; Ryan A Mehl; Matthew B Francis
Journal:  Chem Commun (Camb)       Date:  2008-01-29       Impact factor: 6.222

5.  From disulfide- to thioether-linked glycoproteins.

Authors:  Gonçalo J L Bernardes; Elizabeth J Grayson; Sam Thompson; Justin M Chalker; James C Errey; Farid El Oualid; Timothy D W Claridge; Benjamin G Davis
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

Review 6.  Advances in single-molecule fluorescence methods for molecular biology.

Authors:  Chirlmin Joo; Hamza Balci; Yuji Ishitsuka; Chittanon Buranachai; Taekjip Ha
Journal:  Annu Rev Biochem       Date:  2008       Impact factor: 23.643

7.  Biologically templated photocatalytic nanostructures for sustained light-driven water oxidation.

Authors:  Yoon Sung Nam; Andrew P Magyar; Daeyeon Lee; Jin-Woong Kim; Dong Soo Yun; Heechul Park; Thomas S Pollom; David A Weitz; Angela M Belcher
Journal:  Nat Nanotechnol       Date:  2010-04-11       Impact factor: 39.213

8.  Pyrene actin: documentation of the validity of a sensitive assay for actin polymerization.

Authors:  J A Cooper; S B Walker; T D Pollard
Journal:  J Muscle Res Cell Motil       Date:  1983-04       Impact factor: 2.698

9.  Interior surface modification of bacteriophage MS2.

Authors:  Jacob M Hooker; Ernest W Kovacs; Matthew B Francis
Journal:  J Am Chem Soc       Date:  2004-03-31       Impact factor: 15.419

10.  Protein modification, bioconjugation, and disulfide bridging using bromomaleimides.

Authors:  Mark E B Smith; Felix F Schumacher; Chris P Ryan; Lauren M Tedaldi; Danai Papaioannou; Gabriel Waksman; Stephen Caddick; James R Baker
Journal:  J Am Chem Soc       Date:  2010-02-17       Impact factor: 15.419

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  137 in total

1.  Water-Soluble Palladium Reagents for Cysteine S-Arylation under Ambient Aqueous Conditions.

Authors:  Anthony J Rojas; Bradley L Pentelute; Stephen L Buchwald
Journal:  Org Lett       Date:  2017-08-04       Impact factor: 6.005

2.  Site-selective protein-modification chemistry for basic biology and drug development.

Authors:  Nikolaus Krall; Filipa P da Cruz; Omar Boutureira; Gonçalo J L Bernardes
Journal:  Nat Chem       Date:  2015-11-30       Impact factor: 24.427

3.  Microscale screening of antibody libraries as maytansinoid antibody-drug conjugates.

Authors:  Kalli C Catcott; Molly A McShea; Carl Uli Bialucha; Kathy L Miller; Stuart W Hicks; Parmita Saxena; Thomas G Gesner; Mikias Woldegiorgis; Megan E Lewis; Chen Bai; Michael S Fleming; Seth A Ettenberg; Hans K Erickson; Nicholas C Yoder
Journal:  MAbs       Date:  2016-01-11       Impact factor: 5.857

4.  Photostable and Proteolysis-Resistant Förster Resonance Energy Transfer-Based Calcium Biosensor.

Authors:  Dat Nguyen; Danielle M Behrens; Sanjana Sen; Avid Najdahmadi; Jessica N Pham; Gaetano Speciale; Micah M Lawrence; Sudipta Majumdar; Gregory A Weiss; Elliot L Botvinick
Journal:  Anal Chem       Date:  2020-05-13       Impact factor: 6.986

5.  Site-specific chemical modification of antibody fragments using traceless cleavable linkers.

Authors:  Gonçalo J L Bernardes; Martina Steiner; Isabelle Hartmann; Dario Neri; Giulio Casi
Journal:  Nat Protoc       Date:  2013-10-03       Impact factor: 13.491

6.  N-terminal α-amino group modification of antibodies using a site-selective click chemistry method.

Authors:  De-Zhi Li; Bing-Nan Han; Rui Wei; Gui-Yang Yao; Zhizhen Chen; Jie Liu; Terence C W Poon; Wu Su; Zhongyu Zhu; Dimiter S Dimitrov; Qi Zhao
Journal:  MAbs       Date:  2018-07       Impact factor: 5.857

7.  Organometallic Gold(III) Reagents for Cysteine Arylation.

Authors:  Marco S Messina; Julia M Stauber; Mary A Waddington; Arnold L Rheingold; Heather D Maynard; Alexander M Spokoyny
Journal:  J Am Chem Soc       Date:  2018-05-30       Impact factor: 15.419

8.  Structure of a designed tetrahedral protein assembly variant engineered to have improved soluble expression.

Authors:  Jacob B Bale; Rachel U Park; Yuxi Liu; Shane Gonen; Tamir Gonen; Duilio Cascio; Neil P King; Todd O Yeates; David Baker
Journal:  Protein Sci       Date:  2015-08-06       Impact factor: 6.725

9.  Nickel-Catalyzed Synthesis of Ketones from Alkyl Halides and Acid Chlorides: Preparation of Ethyl 4-Oxododecanoate.

Authors:  Alexander C Wotal; Donald C Batesky; Daniel J Weix
Journal:  Organic Synth       Date:  2016-02-22

10.  Protecting Triazabutadienes To Afford Acid Resistance.

Authors:  Lindsay E Guzman; Flora W Kimani; John C Jewett
Journal:  Chembiochem       Date:  2016-10-21       Impact factor: 3.164

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