Literature DB >> 26791892

Site-selective protein-modification chemistry for basic biology and drug development.

Nikolaus Krall1, Filipa P da Cruz2, Omar Boutureira3, Gonçalo J L Bernardes2,3.   

Abstract

Nature has produced intricate machinery to covalently diversify the structure of proteins after their synthesis in the ribosome. In an attempt to mimic nature, chemists have developed a large set of reactions that enable post-expression modification of proteins at pre-determined sites. These reactions are now used to selectively install particular modifications on proteins for many biological and therapeutic applications. For example, they provide an opportunity to install post-translational modifications on proteins to determine their exact biological roles. Labelling of proteins in live cells with fluorescent dyes allows protein uptake and intracellular trafficking to be tracked and also enables physiological parameters to be measured optically. Through the conjugation of potent cytotoxicants to antibodies, novel anti-cancer drugs with improved efficacy and reduced side effects may be obtained. In this Perspective, we highlight the most exciting current and future applications of chemical site-selective protein modification and consider which hurdles still need to be overcome for more widespread use.

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Year:  2015        PMID: 26791892     DOI: 10.1038/nchem.2393

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  72 in total

1.  Converting a solvatochromic fluorophore into a protein-based pH indicator for extreme acidity.

Authors:  Maiyun Yang; Yanqun Song; Meng Zhang; Shixian Lin; Ziyang Hao; Yuan Liang; Dianmu Zhang; Peng R Chen
Journal:  Angew Chem Int Ed Engl       Date:  2012-07-04       Impact factor: 15.336

2.  Immunoconjugates containing novel maytansinoids: promising anticancer drugs.

Authors:  R V Chari; B A Martell; J L Gross; S B Cook; S A Shah; W A Blättler; S J McKenzie; V S Goldmacher
Journal:  Cancer Res       Date:  1992-01-01       Impact factor: 12.701

3.  One-step site-specific modification of native proteins with 2-pyridinecarboxyaldehydes.

Authors:  James I MacDonald; Henrik K Munch; Troy Moore; Matthew B Francis
Journal:  Nat Chem Biol       Date:  2015-03-30       Impact factor: 15.040

4.  Making sense of nonsense.

Authors:  Catherine Goodman
Journal:  Nat Chem Biol       Date:  2014-03       Impact factor: 15.040

5.  A Pictet-Spengler ligation for protein chemical modification.

Authors:  Paresh Agarwal; Joep van der Weijden; Ellen M Sletten; David Rabuka; Carolyn R Bertozzi
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-13       Impact factor: 11.205

Review 6.  Antibody-drug conjugates: an emerging concept in cancer therapy.

Authors:  Ravi V J Chari; Michael L Miller; Wayne C Widdison
Journal:  Angew Chem Int Ed Engl       Date:  2014-02-20       Impact factor: 15.336

7.  Site-specific introduction of an acetyl-lysine mimic into peptides and proteins by cysteine alkylation.

Authors:  Rong Huang; Marc A Holbert; Mary Katherine Tarrant; Sandrine Curtet; David R Colquhoun; Beverley M Dancy; Blair C Dancy; Yousang Hwang; Yong Tang; Katrina Meeth; Ronen Marmorstein; Robert N Cole; Saadi Khochbin; Philip A Cole
Journal:  J Am Chem Soc       Date:  2010-07-28       Impact factor: 15.419

8.  Expressed protein ligation: a general method for protein engineering.

Authors:  T W Muir; D Sondhi; P A Cole
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

9.  The site-specific installation of methyl-lysine analogs into recombinant histones.

Authors:  Matthew D Simon; Feixia Chu; Lisa R Racki; Cecile C de la Cruz; Alma L Burlingame; Barbara Panning; Geeta J Narlikar; Kevan M Shokat
Journal:  Cell       Date:  2007-03-09       Impact factor: 41.582

10.  Concerted, rapid, quantitative, and site-specific dual labeling of proteins.

Authors:  Amit Sachdeva; Kaihang Wang; Thomas Elliott; Jason W Chin
Journal:  J Am Chem Soc       Date:  2014-05-23       Impact factor: 15.419

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  108 in total

1.  Progress toward sourcing plants for new bioconjugation tools: a screening evaluation of a model peptide ligase using a synthetic precursor.

Authors:  Tunjung Mahatmanto; Isyatul Azizah; Alex Buchberger; Nicholas Stephanopoulos
Journal:  3 Biotech       Date:  2019-11-09       Impact factor: 2.406

Review 2.  Arylation Chemistry for Bioconjugation.

Authors:  Chi Zhang; Ekaterina V Vinogradova; Alexander M Spokoyny; Stephen L Buchwald; Bradley L Pentelute
Journal:  Angew Chem Int Ed Engl       Date:  2019-02-15       Impact factor: 15.336

3.  A mesophilic cysteine-less split intein for protein trans-splicing applications under oxidizing conditions.

Authors:  Maniraj Bhagawati; Tobias M E Terhorst; Friederike Füsser; Simon Hoffmann; Tim Pasch; Shmuel Pietrokovski; Henning D Mootz
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-14       Impact factor: 11.205

4.  Quaternization of Vinyl/Alkynyl Pyridine Enables Ultrafast Cysteine-Selective Protein Modification and Charge Modulation.

Authors:  Maria J Matos; Claudio D Navo; Tuuli Hakala; Xhenti Ferhati; Ana Guerreiro; David Hartmann; Barbara Bernardim; Kadi L Saar; Ismael Compañón; Francisco Corzana; Tuomas P J Knowles; Gonzalo Jiménez-Osés; Gonçalo J L Bernardes
Journal:  Angew Chem Int Ed Engl       Date:  2019-04-09       Impact factor: 15.336

5.  An 'on' switch for proteins.

Authors:  Klaus Michael Hahn
Journal:  Nature       Date:  2019-05       Impact factor: 49.962

6.  Protein Labeling via a Specific Lysine-Isopeptide Bond Using the Pilin Polymerizing Sortase from Corynebacterium diphtheriae.

Authors:  Scott A McConnell; Brendan R Amer; John Muroski; Janine Fu; Chungyu Chang; Rachel R Ogorzalek Loo; Joseph A Loo; Jerzy Osipiuk; Hung Ton-That; Robert T Clubb
Journal:  J Am Chem Soc       Date:  2018-06-28       Impact factor: 15.419

Review 7.  Achieving Controlled Biomolecule-Biomaterial Conjugation.

Authors:  Christopher D Spicer; E Thomas Pashuck; Molly M Stevens
Journal:  Chem Rev       Date:  2018-07-24       Impact factor: 60.622

8.  Three-Component Protein Modification Using Mercaptobenzaldehyde Derivatives.

Authors:  Yuanwei Dai; Jiaping Weng; Justin George; Huan Chen; Qishan Lin; Jun Wang; Maksim Royzen; Qiang Zhang
Journal:  Org Lett       Date:  2019-05-06       Impact factor: 6.005

Review 9.  Functional protein nanostructures: a chemical toolbox.

Authors:  Seah Ling Kuan; Fernando R G Bergamini; Tanja Weil
Journal:  Chem Soc Rev       Date:  2018-11-19       Impact factor: 54.564

10.  Systematic Activity Maturation of a Single-Domain Antibody with Non-canonical Amino Acids through Chemical Mutagenesis.

Authors:  Philip R Lindstedt; Francesco A Aprile; Pietro Sormanni; Robertinah Rakoto; Christopher M Dobson; Gonçalo J L Bernardes; Michele Vendruscolo
Journal:  Cell Chem Biol       Date:  2020-11-19       Impact factor: 8.116

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