| Literature DB >> 22719569 |
Ignez Caracelli, Paulo R Olivato, Carlos R Cerqueira, Jean M M Santos, Seik Weng Ng, Edward R T Tiekink.
Abstract
The piperidone ring in the title compound, C(18)H(19)NOS(2), is in a distorted half-chair conformation, distorted towards a twisted boat, with the central methyl-ene C atom of the propyl backbone lying 0.606 (2) Å out of the plane defined by the other five atoms (r.m.s. deviation = 0.1197 Å). One of the S-bound phenyl rings is almost perpendicular to the least-squares plane through the piperidone ring, whereas the other is splayed [dihedral angles = 75.97 (6) and 44.21 (7)°, respectively]. The most prominent feature of the crystal packing is the formation of helical supra-molecular chains along the b axis sustained by C-H⋯O inter-actions. The chains are consolidated into a three-dimensional architecture via C-H⋯π inter-actions whereby one S-bound phenyl ring accepts two C-H⋯π contacts.Entities:
Year: 2012 PMID: 22719569 PMCID: PMC3379371 DOI: 10.1107/S1600536812021277
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H19NOS2 | |
| Orthorhombic, | Cu |
| Hall symbol: P 2ac 2ab | Cell parameters from 3533 reflections |
| θ = 4.5–75.9° | |
| µ = 2.93 mm−1 | |
| Prism, colourless | |
| 0.35 × 0.30 × 0.25 mm |
| Agilent SuperNova Dual (Cu at zero) diffractometer with an Atlas detector | 2769 independent reflections |
| Radiation source: fine-focus sealed tube | 2728 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 76.2°, θmin = 5.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 4452 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2769 reflections | Δρmax = 0.19 e Å−3 |
| 200 parameters | Δρmin = −0.32 e Å−3 |
| 0 restraints | Absolute structure: Flack (1983), 818 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.024 (14) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.30204 (5) | 1.02555 (4) | 0.75801 (2) | 0.01619 (10) | |
| S2 | 0.35543 (5) | 0.81897 (4) | 0.65673 (2) | 0.01664 (10) | |
| N1 | −0.07129 (19) | 0.98484 (16) | 0.66379 (7) | 0.0177 (3) | |
| O1 | 0.15902 (17) | 1.07356 (13) | 0.62189 (6) | 0.0212 (3) | |
| C1 | 0.0918 (2) | 0.99466 (17) | 0.66038 (8) | 0.0152 (3) | |
| C2 | 0.1941 (2) | 0.90147 (17) | 0.70511 (8) | 0.0134 (3) | |
| C3 | 0.0940 (2) | 0.79738 (17) | 0.74265 (8) | 0.0146 (3) | |
| H3A | 0.0652 | 0.7210 | 0.7132 | 0.018* | |
| H3B | 0.1593 | 0.7606 | 0.7794 | 0.018* | |
| C4 | −0.0604 (2) | 0.86200 (18) | 0.76924 (9) | 0.0180 (4) | |
| H4A | −0.1205 | 0.7955 | 0.7965 | 0.022* | |
| H4B | −0.0325 | 0.9412 | 0.7970 | 0.022* | |
| C5 | −0.1651 (2) | 0.9070 (2) | 0.71229 (9) | 0.0216 (4) | |
| H5A | −0.2130 | 0.8260 | 0.6908 | 0.026* | |
| H5B | −0.2557 | 0.9639 | 0.7289 | 0.026* | |
| C6 | −0.1655 (3) | 1.0590 (2) | 0.61425 (9) | 0.0253 (4) | |
| H6A | −0.1307 | 1.0306 | 0.5703 | 0.038* | |
| H6B | −0.1470 | 1.1569 | 0.6194 | 0.038* | |
| H6C | −0.2816 | 1.0392 | 0.6199 | 0.038* | |
| C7 | 0.3549 (2) | 0.93152 (17) | 0.82931 (8) | 0.0142 (3) | |
| C8 | 0.2861 (2) | 0.96954 (18) | 0.88918 (8) | 0.0188 (3) | |
| H8 | 0.2052 | 1.0385 | 0.8906 | 0.023* | |
| C9 | 0.3364 (3) | 0.90622 (19) | 0.94685 (8) | 0.0216 (4) | |
| H9 | 0.2906 | 0.9328 | 0.9877 | 0.026* | |
| C10 | 0.4531 (2) | 0.80460 (19) | 0.94479 (9) | 0.0203 (4) | |
| H10 | 0.4880 | 0.7626 | 0.9844 | 0.024* | |
| C11 | 0.5195 (2) | 0.76355 (18) | 0.88520 (9) | 0.0197 (4) | |
| H11 | 0.5975 | 0.6923 | 0.8839 | 0.024* | |
| C12 | 0.4711 (2) | 0.82740 (18) | 0.82761 (8) | 0.0159 (3) | |
| H12 | 0.5170 | 0.8003 | 0.7868 | 0.019* | |
| C13 | 0.2397 (2) | 0.71592 (18) | 0.60188 (8) | 0.0152 (3) | |
| C14 | 0.2444 (2) | 0.57523 (19) | 0.60717 (8) | 0.0184 (4) | |
| H14 | 0.3047 | 0.5338 | 0.6416 | 0.022* | |
| C15 | 0.1608 (2) | 0.49458 (19) | 0.56209 (9) | 0.0220 (4) | |
| H15 | 0.1653 | 0.3983 | 0.5655 | 0.026* | |
| C16 | 0.0713 (2) | 0.5546 (2) | 0.51225 (9) | 0.0221 (4) | |
| H16 | 0.0131 | 0.4998 | 0.4818 | 0.027* | |
| C17 | 0.0671 (3) | 0.6953 (2) | 0.50700 (9) | 0.0261 (4) | |
| H17 | 0.0059 | 0.7366 | 0.4728 | 0.031* | |
| C18 | 0.1512 (3) | 0.77555 (19) | 0.55114 (8) | 0.0224 (4) | |
| H18 | 0.1486 | 0.8717 | 0.5469 | 0.027* |
| S1 | 0.0193 (2) | 0.01418 (17) | 0.01510 (18) | −0.00298 (17) | −0.00493 (16) | 0.00065 (14) |
| S2 | 0.01155 (18) | 0.0246 (2) | 0.01375 (18) | −0.00025 (17) | −0.00070 (15) | −0.00305 (16) |
| N1 | 0.0151 (7) | 0.0212 (7) | 0.0167 (6) | 0.0036 (6) | −0.0037 (6) | 0.0015 (6) |
| O1 | 0.0241 (7) | 0.0212 (6) | 0.0182 (6) | −0.0059 (6) | −0.0033 (5) | 0.0061 (5) |
| C1 | 0.0182 (8) | 0.0152 (8) | 0.0122 (7) | −0.0006 (7) | −0.0022 (6) | −0.0011 (7) |
| C2 | 0.0126 (7) | 0.0160 (7) | 0.0116 (7) | −0.0014 (7) | −0.0022 (6) | 0.0003 (6) |
| C3 | 0.0162 (8) | 0.0145 (7) | 0.0132 (7) | −0.0018 (7) | −0.0004 (6) | 0.0001 (7) |
| C4 | 0.0171 (9) | 0.0199 (8) | 0.0171 (8) | −0.0015 (7) | 0.0029 (7) | −0.0002 (7) |
| C5 | 0.0135 (8) | 0.0262 (9) | 0.0252 (9) | −0.0001 (8) | 0.0015 (8) | −0.0002 (7) |
| C6 | 0.0243 (10) | 0.0303 (9) | 0.0213 (8) | 0.0088 (9) | −0.0098 (8) | −0.0003 (8) |
| C7 | 0.0127 (7) | 0.0163 (7) | 0.0135 (7) | −0.0029 (7) | −0.0037 (7) | −0.0017 (6) |
| C8 | 0.0199 (9) | 0.0186 (8) | 0.0180 (8) | 0.0014 (8) | −0.0014 (7) | −0.0038 (7) |
| C9 | 0.0284 (10) | 0.0242 (9) | 0.0123 (7) | −0.0039 (8) | −0.0003 (7) | −0.0025 (7) |
| C10 | 0.0236 (9) | 0.0200 (8) | 0.0173 (8) | −0.0066 (8) | −0.0079 (7) | 0.0022 (7) |
| C11 | 0.0151 (8) | 0.0170 (8) | 0.0270 (9) | −0.0019 (7) | −0.0062 (8) | 0.0011 (7) |
| C12 | 0.0123 (8) | 0.0183 (8) | 0.0172 (8) | −0.0015 (7) | 0.0000 (6) | −0.0031 (7) |
| C13 | 0.0117 (8) | 0.0229 (8) | 0.0109 (7) | 0.0010 (7) | 0.0006 (6) | −0.0026 (6) |
| C14 | 0.0164 (8) | 0.0235 (8) | 0.0154 (7) | 0.0058 (8) | 0.0007 (7) | −0.0013 (7) |
| C15 | 0.0226 (9) | 0.0221 (9) | 0.0213 (8) | 0.0008 (8) | 0.0015 (8) | −0.0053 (7) |
| C16 | 0.0176 (8) | 0.0317 (10) | 0.0170 (8) | −0.0014 (8) | 0.0006 (7) | −0.0088 (7) |
| C17 | 0.0266 (10) | 0.0351 (10) | 0.0167 (8) | 0.0049 (9) | −0.0100 (8) | −0.0018 (8) |
| C18 | 0.0293 (10) | 0.0223 (8) | 0.0157 (8) | 0.0014 (8) | −0.0045 (8) | 0.0006 (7) |
| S1—C7 | 1.7755 (17) | C7—C12 | 1.400 (3) |
| S1—C2 | 1.8535 (17) | C8—C9 | 1.392 (2) |
| S2—C13 | 1.7826 (17) | C8—H8 | 0.9500 |
| S2—C2 | 1.8396 (18) | C9—C10 | 1.385 (3) |
| N1—C1 | 1.344 (2) | C9—H9 | 0.9500 |
| N1—C6 | 1.466 (2) | C10—C11 | 1.390 (3) |
| N1—C5 | 1.468 (2) | C10—H10 | 0.9500 |
| O1—C1 | 1.233 (2) | C11—C12 | 1.389 (2) |
| C1—C2 | 1.541 (2) | C11—H11 | 0.9500 |
| C2—C3 | 1.519 (2) | C12—H12 | 0.9500 |
| C3—C4 | 1.518 (2) | C13—C14 | 1.388 (3) |
| C3—H3A | 0.9900 | C13—C18 | 1.393 (2) |
| C3—H3B | 0.9900 | C14—C15 | 1.394 (3) |
| C4—C5 | 1.511 (3) | C14—H14 | 0.9500 |
| C4—H4A | 0.9900 | C15—C16 | 1.385 (3) |
| C4—H4B | 0.9900 | C15—H15 | 0.9500 |
| C5—H5A | 0.9900 | C16—C17 | 1.388 (3) |
| C5—H5B | 0.9900 | C16—H16 | 0.9500 |
| C6—H6A | 0.9800 | C17—C18 | 1.381 (3) |
| C6—H6B | 0.9800 | C17—H17 | 0.9500 |
| C6—H6C | 0.9800 | C18—H18 | 0.9500 |
| C7—C8 | 1.395 (2) | ||
| C7—S1—C2 | 104.46 (7) | H6B—C6—H6C | 109.5 |
| C13—S2—C2 | 101.69 (8) | C8—C7—C12 | 119.57 (16) |
| C1—N1—C6 | 117.01 (16) | C8—C7—S1 | 118.46 (13) |
| C1—N1—C5 | 126.51 (15) | C12—C7—S1 | 121.82 (13) |
| C6—N1—C5 | 116.48 (15) | C9—C8—C7 | 119.86 (17) |
| O1—C1—N1 | 121.59 (16) | C9—C8—H8 | 120.1 |
| O1—C1—C2 | 120.39 (16) | C7—C8—H8 | 120.1 |
| N1—C1—C2 | 118.00 (15) | C10—C9—C8 | 120.14 (17) |
| C3—C2—C1 | 113.80 (14) | C10—C9—H9 | 119.9 |
| C3—C2—S2 | 111.23 (11) | C8—C9—H9 | 119.9 |
| C1—C2—S2 | 109.75 (11) | C9—C10—C11 | 120.47 (17) |
| C3—C2—S1 | 114.18 (11) | C9—C10—H10 | 119.8 |
| C1—C2—S1 | 102.29 (11) | C11—C10—H10 | 119.8 |
| S2—C2—S1 | 104.91 (9) | C12—C11—C10 | 119.60 (17) |
| C4—C3—C2 | 110.44 (14) | C12—C11—H11 | 120.2 |
| C4—C3—H3A | 109.6 | C10—C11—H11 | 120.2 |
| C2—C3—H3A | 109.6 | C11—C12—C7 | 120.32 (16) |
| C4—C3—H3B | 109.6 | C11—C12—H12 | 119.8 |
| C2—C3—H3B | 109.6 | C7—C12—H12 | 119.8 |
| H3A—C3—H3B | 108.1 | C14—C13—C18 | 119.44 (16) |
| C5—C4—C3 | 108.91 (14) | C14—C13—S2 | 120.21 (14) |
| C5—C4—H4A | 109.9 | C18—C13—S2 | 120.25 (14) |
| C3—C4—H4A | 109.9 | C13—C14—C15 | 120.15 (17) |
| C5—C4—H4B | 109.9 | C13—C14—H14 | 119.9 |
| C3—C4—H4B | 109.9 | C15—C14—H14 | 119.9 |
| H4A—C4—H4B | 108.3 | C16—C15—C14 | 120.10 (18) |
| N1—C5—C4 | 111.75 (15) | C16—C15—H15 | 120.0 |
| N1—C5—H5A | 109.3 | C14—C15—H15 | 120.0 |
| C4—C5—H5A | 109.3 | C15—C16—C17 | 119.63 (18) |
| N1—C5—H5B | 109.3 | C15—C16—H16 | 120.2 |
| C4—C5—H5B | 109.3 | C17—C16—H16 | 120.2 |
| H5A—C5—H5B | 107.9 | C18—C17—C16 | 120.46 (19) |
| N1—C6—H6A | 109.5 | C18—C17—H17 | 119.8 |
| N1—C6—H6B | 109.5 | C16—C17—H17 | 119.8 |
| H6A—C6—H6B | 109.5 | C17—C18—C13 | 120.21 (18) |
| N1—C6—H6C | 109.5 | C17—C18—H18 | 119.9 |
| H6A—C6—H6C | 109.5 | C13—C18—H18 | 119.9 |
| C6—N1—C1—O1 | 7.5 (3) | C3—C4—C5—N1 | −48.7 (2) |
| C5—N1—C1—O1 | −172.54 (16) | C2—S1—C7—C8 | −115.91 (15) |
| C6—N1—C1—C2 | −171.12 (14) | C2—S1—C7—C12 | 68.49 (16) |
| C5—N1—C1—C2 | 8.9 (3) | C12—C7—C8—C9 | 1.6 (3) |
| O1—C1—C2—C3 | −172.11 (15) | S1—C7—C8—C9 | −174.07 (15) |
| N1—C1—C2—C3 | 6.5 (2) | C7—C8—C9—C10 | −0.7 (3) |
| O1—C1—C2—S2 | −46.74 (18) | C8—C9—C10—C11 | −0.9 (3) |
| N1—C1—C2—S2 | 131.88 (15) | C9—C10—C11—C12 | 1.6 (3) |
| O1—C1—C2—S1 | 64.23 (17) | C10—C11—C12—C7 | −0.6 (3) |
| N1—C1—C2—S1 | −117.15 (15) | C8—C7—C12—C11 | −1.0 (3) |
| C13—S2—C2—C3 | 61.95 (12) | S1—C7—C12—C11 | 174.61 (13) |
| C13—S2—C2—C1 | −64.87 (12) | C2—S2—C13—C14 | −111.92 (15) |
| C13—S2—C2—S1 | −174.12 (8) | C2—S2—C13—C18 | 71.68 (16) |
| C7—S1—C2—C3 | 33.97 (14) | C18—C13—C14—C15 | −0.1 (3) |
| C7—S1—C2—C1 | 157.38 (11) | S2—C13—C14—C15 | −176.56 (14) |
| C7—S1—C2—S2 | −88.05 (9) | C13—C14—C15—C16 | −0.7 (3) |
| C1—C2—C3—C4 | −42.33 (18) | C14—C15—C16—C17 | 0.8 (3) |
| S2—C2—C3—C4 | −166.90 (11) | C15—C16—C17—C18 | −0.1 (3) |
| S1—C2—C3—C4 | 74.61 (16) | C16—C17—C18—C13 | −0.7 (3) |
| C2—C3—C4—C5 | 63.97 (18) | C14—C13—C18—C17 | 0.8 (3) |
| C1—N1—C5—C4 | 13.1 (3) | S2—C13—C18—C17 | 177.28 (16) |
| C6—N1—C5—C4 | −166.90 (15) |
| H··· | ||||
| C11—H11···O1i | 0.95 | 2.32 | 3.237 (3) | 163 |
| C6—H6b··· | 0.98 | 2.95 | 3.606 (2) | 125 |
| C14—H14··· | 0.95 | 2.96 | 3.544 (2) | 121 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C7–C12 ring.
| H⋯ | ||||
|---|---|---|---|---|
| C11—H11⋯O1i | 0.95 | 2.32 | 3.237 (3) | 163 |
| C6—H6b⋯ | 0.98 | 2.95 | 3.606 (2) | 125 |
| C14—H14⋯ | 0.95 | 2.96 | 3.544 (2) | 121 |
Symmetry codes: (i) ; (ii) ; (iii) .