Literature DB >> 27924075

Histone variants on the move: substrates for chromatin dynamics.

Paul B Talbert1, Steven Henikoff1.   

Abstract

Most histones are assembled into nucleosomes behind the replication fork to package newly synthesized DNA. By contrast, histone variants, which are encoded by separate genes, are typically incorporated throughout the cell cycle. Histone variants can profoundly change chromatin properties, which in turn affect DNA replication and repair, transcription, and chromosome packaging and segregation. Recent advances in the study of histone replacement have elucidated the dynamic processes by which particular histone variants become substrates of histone chaperones, ATP-dependent chromatin remodellers and histone-modifying enzymes. Here, we review histone variant dynamics and the effects of replacing DNA synthesis-coupled histones with their replication-independent variants on the chromatin landscape.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27924075     DOI: 10.1038/nrm.2016.148

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  164 in total

1.  Methyl-CpG binding protein MBD1 couples histone H3 methylation at lysine 9 by SETDB1 to DNA replication and chromatin assembly.

Authors:  Shireen A Sarraf; Irina Stancheva
Journal:  Mol Cell       Date:  2004-08-27       Impact factor: 17.970

Review 2.  Heterochromatin proteins and the control of heterochromatic gene silencing in Arabidopsis.

Authors:  Andreas Fischer; Ingo Hofmann; Kathrin Naumann; Gunter Reuter
Journal:  J Plant Physiol       Date:  2005-12-27       Impact factor: 3.549

3.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

4.  Nucleosomes are context-specific, H2A.Z-modulated barriers to RNA polymerase.

Authors:  Christopher M Weber; Srinivas Ramachandran; Steven Henikoff
Journal:  Mol Cell       Date:  2014-03-06       Impact factor: 17.970

Review 5.  DNA methylation, H2A.Z, and the regulation of constitutive expression.

Authors:  D Coleman-Derr; D Zilberman
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2012-12-18

6.  H2A.Z.2.2 is an alternatively spliced histone H2A.Z variant that causes severe nucleosome destabilization.

Authors:  Clemens Bönisch; Katrin Schneider; Sebastian Pünzeler; Sonja M Wiedemann; Christina Bielmeier; Marco Bocola; H Christian Eberl; Wolfgang Kuegel; Jürgen Neumann; Elisabeth Kremmer; Heinrich Leonhardt; Matthias Mann; Jens Michaelis; Lothar Schermelleh; Sandra B Hake
Journal:  Nucleic Acids Res       Date:  2012-03-29       Impact factor: 16.971

7.  CAF-1 is essential for heterochromatin organization in pluripotent embryonic cells.

Authors:  Martin Houlard; Soizik Berlivet; Aline V Probst; Jean-Pierre Quivy; Patrick Héry; Geneviève Almouzni; Matthieu Gérard
Journal:  PLoS Genet       Date:  2006-09-11       Impact factor: 5.917

8.  Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells.

Authors:  Simon J Elsässer; Laura A Banaszynski; Kyung-Min Noh; Nichole Diaz; C David Allis
Journal:  Nature       Date:  2015-05-04       Impact factor: 49.962

9.  A nucleosome turnover map reveals that the stability of histone H4 Lys20 methylation depends on histone recycling in transcribed chromatin.

Authors:  J Peter Svensson; Manu Shukla; Victoria Menendez-Benito; Ulrika Norman-Axelsson; Pauline Audergon; Indranil Sinha; Jason C Tanny; Robin C Allshire; Karl Ekwall
Journal:  Genome Res       Date:  2015-03-16       Impact factor: 9.043

10.  Yeast CAF-1 assembles histone (H3-H4)2 tetramers prior to DNA deposition.

Authors:  Duane D Winkler; Hui Zhou; Mohd A Dar; Zhiguo Zhang; Karolin Luger
Journal:  Nucleic Acids Res       Date:  2012-08-31       Impact factor: 16.971

View more
  100 in total

1.  NMR Analyses of Acetylated H2A.Z Isoforms Identify Differential Binding Interactions with the Bromodomain of the NURF Nucleosome Remodeling Complex.

Authors:  Noelle M Olson; Samantha Kroc; Jorden A Johnson; Huda Zahid; Peter D Ycas; Alice Chan; Jennifer R Kimbrough; Prakriti Kalra; Ernst Schönbrunn; William C K Pomerantz
Journal:  Biochemistry       Date:  2020-05-11       Impact factor: 3.162

2.  Chromatin Is the Same in a Relative Way (But You're Older).

Authors:  Rosibel J Mason; Thomas M Vondriska
Journal:  Circ Res       Date:  2019-07-03       Impact factor: 17.367

3.  Single-Cell Chromatin Modification Profiling Reveals Increased Epigenetic Variations with Aging.

Authors:  Peggie Cheung; Francesco Vallania; Hayley C Warsinske; Michele Donato; Steven Schaffert; Sarah E Chang; Mai Dvorak; Cornelia L Dekker; Mark M Davis; Paul J Utz; Purvesh Khatri; Alex J Kuo
Journal:  Cell       Date:  2018-04-26       Impact factor: 41.582

4.  Interaction of positive coactivator 4 with histone 3.3 protein is essential for transcriptional activation of the luteinizing hormone receptor gene.

Authors:  Peng Zhao; Raghuveer Kavarthapu; Rajakumar Anbazhagan; Mingjuan Liao; Maria L Dufau
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2018-09-13       Impact factor: 4.490

5.  Rpp29 regulates histone H3.3 chromatin assembly through transcriptional mechanisms.

Authors:  Prashanth Krishna Shastrula; Peder J Lund; Benjamin A Garcia; Susan M Janicki
Journal:  J Biol Chem       Date:  2018-06-19       Impact factor: 5.157

6.  Functional Redundancy of Variant and Canonical Histone H3 Lysine 9 Modification in Drosophila.

Authors:  Taylor J R Penke; Daniel J McKay; Brian D Strahl; A Gregory Matera; Robert J Duronio
Journal:  Genetics       Date:  2017-11-13       Impact factor: 4.562

7.  Charged residues on the side of the nucleosome contribute to normal Spt16-gene interactions in budding yeast.

Authors:  Eugene Nyamugenda; A Brandon Cox; Jacob B Pierce; Ryan C Banning; Michelle L Huynh; Catey May; Sarah Marshall; Claire E Turkal; Andrea A Duina
Journal:  Epigenetics       Date:  2018-02-08       Impact factor: 4.528

Review 8.  Understanding nucleosome dynamics and their links to gene expression and DNA replication.

Authors:  William K M Lai; B Franklin Pugh
Journal:  Nat Rev Mol Cell Biol       Date:  2017-05-24       Impact factor: 94.444

Review 9.  Replication-Coupled Nucleosome Assembly in the Passage of Epigenetic Information and Cell Identity.

Authors:  Albert Serra-Cardona; Zhiguo Zhang
Journal:  Trends Biochem Sci       Date:  2017-12-29       Impact factor: 13.807

10.  Simultaneous disruption of PRC2 and enhancer function underlies histone H3.3-K27M oncogenic activity in human hindbrain neural stem cells.

Authors:  Gerard L Brien; Raul Bardini Bressan; Craig Monger; Dáire Gannon; Eimear Lagan; Anthony M Doherty; Evan Healy; Hannah Neikes; Darren J Fitzpatrick; Orla Deevy; Vivien Grant; Maria-Angeles Marqués-Torrejón; Neza Alfazema; Steven M Pollard; Adrian P Bracken
Journal:  Nat Genet       Date:  2021-07-22       Impact factor: 38.330

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.