Literature DB >> 22547680

Origins and formation of histone methylation across the human cell cycle.

Barry M Zee1, Laura-Mae P Britton, Daniel Wolle, Devorah M Haberman, Benjamin A Garcia.   

Abstract

The connections between various nuclear processes and specific histone posttranslational modifications are dependent to a large extent on the acquisition of those modifications after histone synthesis. The reestablishment of histone posttranslational modifications after S phase is especially critical for H3K9 and H3K27 trimethylation, both of which are linked with epigenetic memory and must be stably transmitted from one cellular generation to the next. This report uses a proteomic strategy to interrogate how and when the cell coordinates the formation of histone posttranslational modifications during division. Paramount among the findings is that H3K9 and H3K27 trimethylation begins during S phase but is completed only during the subsequent G(1) phase via two distinct pathways from the unmodified and preexisting dimethylated states. In short, we have systematically characterized the temporal origins and methylation pathways for histone posttranslational modifications during the cell cycle.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22547680      PMCID: PMC3434498          DOI: 10.1128/MCB.06673-11

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  54 in total

1.  Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity.

Authors:  Huck Hui Ng; François Robert; Richard A Young; Kevin Struhl
Journal:  Mol Cell       Date:  2003-03       Impact factor: 17.970

2.  Concurrent replication and methylation at mammalian origins of replication.

Authors:  F D Araujo; J D Knox; M Szyf; G B Price; M Zannis-Hadjopoulos
Journal:  Mol Cell Biol       Date:  1998-06       Impact factor: 4.272

3.  G2 histone methylation is required for the proper segregation of chromosomes.

Authors:  Ryan Heit; Jerome B Rattner; Gordon K T Chan; Michael J Hendzel
Journal:  J Cell Sci       Date:  2009-07-28       Impact factor: 5.285

4.  Combinatorial patterns of histone acetylations and methylations in the human genome.

Authors:  Zhibin Wang; Chongzhi Zang; Jeffrey A Rosenfeld; Dustin E Schones; Artem Barski; Suresh Cuddapah; Kairong Cui; Tae-Young Roh; Weiqun Peng; Michael Q Zhang; Keji Zhao
Journal:  Nat Genet       Date:  2008-06-15       Impact factor: 38.330

5.  Human origin recognition complex is essential for HP1 binding to chromatin and heterochromatin organization.

Authors:  Supriya G Prasanth; Zhen Shen; Kannanganattu V Prasanth; Bruce Stillman
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-05       Impact factor: 11.205

6.  Phosphorylation of the PRC2 component Ezh2 is cell cycle-regulated and up-regulates its binding to ncRNA.

Authors:  Syuzo Kaneko; Gang Li; Jinsook Son; Chong-Feng Xu; Raphael Margueron; Thomas A Neubert; Danny Reinberg
Journal:  Genes Dev       Date:  2010-12-01       Impact factor: 11.361

7.  Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription.

Authors:  Michael J Carrozza; Bing Li; Laurence Florens; Tamaki Suganuma; Selene K Swanson; Kenneth K Lee; Wei-Jong Shia; Scott Anderson; John Yates; Michael P Washburn; Jerry L Workman
Journal:  Cell       Date:  2005-11-18       Impact factor: 41.582

8.  Global turnover of histone post-translational modifications and variants in human cells.

Authors:  Barry M Zee; Rebecca S Levin; Peter A DiMaggio; Benjamin A Garcia
Journal:  Epigenetics Chromatin       Date:  2010-12-06       Impact factor: 4.954

9.  PHF8 mediates histone H4 lysine 20 demethylation events involved in cell cycle progression.

Authors:  Wen Liu; Bogdan Tanasa; Oksana V Tyurina; Tian Yuan Zhou; Reto Gassmann; Wei Ting Liu; Kenneth A Ohgi; Chris Benner; Ivan Garcia-Bassets; Aneel K Aggarwal; Arshad Desai; Pieter C Dorrestein; Christopher K Glass; Michael G Rosenfeld
Journal:  Nature       Date:  2010-07-11       Impact factor: 49.962

10.  The distribution of polycomb-group proteins during cell division and development in Drosophila embryos: impact on models for silencing.

Authors:  P Buchenau; J Hodgson; H Strutt; D J Arndt-Jovin
Journal:  J Cell Biol       Date:  1998-04-20       Impact factor: 10.539

View more
  42 in total

1.  Middle-Down and Chemical Proteomic Approaches to Reveal Histone H4 Modification Dynamics in Cell Cycle: Label-Free Semi-Quantification of Histone Tail Peptide Modifications Including Phosphorylation and Highly Sensitive Capture of Histone PTM Binding Proteins Using Photo-Reactive Crosslinkers.

Authors:  Kazuki Yamamoto; Yoko Chikaoka; Gosuke Hayashi; Ryosuke Sakamoto; Ryuji Yamamoto; Akira Sugiyama; Tatsuhiko Kodama; Akimitsu Okamoto; Takeshi Kawamura
Journal:  Mass Spectrom (Tokyo)       Date:  2015-07-14

2.  Histone methylation has dynamics distinct from those of histone acetylation in cell cycle reentry from quiescence.

Authors:  Philipp Mews; Barry M Zee; Sherry Liu; Greg Donahue; Benjamin A Garcia; Shelley L Berger
Journal:  Mol Cell Biol       Date:  2014-08-25       Impact factor: 4.272

3.  EpiProfile 2.0: A Computational Platform for Processing Epi-Proteomics Mass Spectrometry Data.

Authors:  Zuo-Fei Yuan; Simone Sidoli; Dylan M Marchione; Johayra Simithy; Kevin A Janssen; Mary R Szurgot; Benjamin A Garcia
Journal:  J Proteome Res       Date:  2018-05-30       Impact factor: 4.466

Review 4.  Quantitative proteomic analysis of histone modifications.

Authors:  He Huang; Shu Lin; Benjamin A Garcia; Yingming Zhao
Journal:  Chem Rev       Date:  2015-02-17       Impact factor: 60.622

5.  EpiProfile Quantifies Histone Peptides With Modifications by Extracting Retention Time and Intensity in High-resolution Mass Spectra.

Authors:  Zuo-Fei Yuan; Shu Lin; Rosalynn C Molden; Xing-Jun Cao; Natarajan V Bhanu; Xiaoshi Wang; Simone Sidoli; Shichong Liu; Benjamin A Garcia
Journal:  Mol Cell Proteomics       Date:  2015-03-24       Impact factor: 5.911

6.  A proteomic glimpse into the initial global epigenetic changes during HIV infection.

Authors:  Laura-Mae P Britton; Pavel Sova; Sarah Belisle; Shichong Liu; Eric Y Chan; Michael G Katze; Benjamin A Garcia
Journal:  Proteomics       Date:  2014-09-05       Impact factor: 3.984

7.  Transcriptional landscape of the human cell cycle.

Authors:  Yin Liu; Sujun Chen; Su Wang; Fraser Soares; Martin Fischer; Feilong Meng; Zhou Du; Charles Lin; Clifford Meyer; James A DeCaprio; Myles Brown; X Shirley Liu; Housheng Hansen He
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-13       Impact factor: 11.205

8.  Quantitative dynamics of the link between cellular metabolism and histone acetylation.

Authors:  Adam G Evertts; Barry M Zee; Peter A Dimaggio; Michelle Gonzales-Cope; Hilary A Coller; Benjamin A Garcia
Journal:  J Biol Chem       Date:  2013-03-12       Impact factor: 5.157

9.  The role of PR-Set7 in replication licensing depends on Suv4-20h.

Authors:  David B Beck; Adam Burton; Hisanobu Oda; Céline Ziegler-Birling; Maria-Elena Torres-Padilla; Danny Reinberg
Journal:  Genes Dev       Date:  2012-11-14       Impact factor: 11.361

Review 10.  Polycomb Repressive Complex 2: a Dimmer Switch of Gene Regulation in Calvarial Bone Development.

Authors:  Timothy Nehila; James W Ferguson; Radhika P Atit
Journal:  Curr Osteoporos Rep       Date:  2020-08       Impact factor: 5.096

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.