Literature DB >> 22038514

Automated detection of critical results in radiology reports.

Paras Lakhani1, Woojin Kim, Curtis P Langlotz.   

Abstract

The goal of this study was to develop and validate text-mining algorithms to automatically identify radiology reports containing critical results including tension or increasing/new large pneumothorax, acute pulmonary embolism, acute cholecystitis, acute appendicitis, ectopic pregnancy, scrotal torsion, unexplained free intraperitoneal air, new or increasing intracranial hemorrhage, and malpositioned tubes and lines. The algorithms were developed using rule-based approaches and designed to search for common words and phrases in radiology reports that indicate critical results. Certain text-mining features were utilized such as wildcards, stemming, negation detection, proximity matching, and expanded searches with applicable synonyms. To further improve accuracy, the algorithms utilized modality and exam-specific queries, searched under the "Impression" field of the radiology report, and excluded reports with a low level of diagnostic certainty. Algorithm accuracy was determined using precision, recall, and F-measure using human review as the reference standard. The overall accuracy (F-measure) of the algorithms ranged from 81% to 100%, with a mean precision and recall of 96% and 91%, respectively. These algorithms can be applied to radiology report databases for quality assurance and accreditation, integrated with existing dashboards for display and monitoring, and ported to other institutions for their own use.

Entities:  

Mesh:

Year:  2012        PMID: 22038514      PMCID: PMC3264731          DOI: 10.1007/s10278-011-9426-6

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  14 in total

1.  A statistical natural language processor for medical reports.

Authors:  R K Taira; S G Soderland
Journal:  Proc AMIA Symp       Date:  1999

2.  Automatic extraction of linguistic knowledge from an international classification.

Authors:  R Baud; C Lovis; A M Rassinoux; P A Michel; J R Scherrer
Journal:  Stud Health Technol Inform       Date:  1998

3.  The role of domain knowledge in automating medical text report classification.

Authors:  Adam B Wilcox; George Hripcsak
Journal:  J Am Med Inform Assoc       Date:  2003-03-28       Impact factor: 4.497

4.  Use of natural language processing to translate clinical information from a database of 889,921 chest radiographic reports.

Authors:  George Hripcsak; John H M Austin; Philip O Alderson; Carol Friedman
Journal:  Radiology       Date:  2002-07       Impact factor: 11.105

5.  Automated extraction and normalization of findings from cancer-related free-text radiology reports.

Authors:  Burke W Mamlin; Daniel T Heinze; Clement J McDonald
Journal:  AMIA Annu Symp Proc       Date:  2003

6.  A simple algorithm for identifying negated findings and diseases in discharge summaries.

Authors:  W W Chapman; W Bridewell; P Hanbury; G F Cooper; B G Buchanan
Journal:  J Biomed Inform       Date:  2001-10       Impact factor: 6.317

7.  Agreement, the f-measure, and reliability in information retrieval.

Authors:  George Hripcsak; Adam S Rothschild
Journal:  J Am Med Inform Assoc       Date:  2005-01-31       Impact factor: 4.497

8.  Finding malignant findings from radiological reports using medical attributes and syntactic information.

Authors:  Takeshi Imai; Eiji Aramaki; Masayuki Kajino; Kengo Miyo; Yuzo Onogi; Kazuhiko Ohe
Journal:  Stud Health Technol Inform       Date:  2007

9.  Three approaches to automatic assignment of ICD-9-CM codes to radiology reports.

Authors:  Ira Goldstein; Anna Arzrumtsyan; Ozlem Uzuner
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

10.  Natural language processing: the basics (part 1).

Authors:  Ronilda Lacson; Ramin Khorasani
Journal:  J Am Coll Radiol       Date:  2011-06       Impact factor: 5.532

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  14 in total

Review 1.  Natural Language Processing Technologies in Radiology Research and Clinical Applications.

Authors:  Tianrun Cai; Andreas A Giannopoulos; Sheng Yu; Tatiana Kelil; Beth Ripley; Kanako K Kumamaru; Frank J Rybicki; Dimitrios Mitsouras
Journal:  Radiographics       Date:  2016 Jan-Feb       Impact factor: 5.333

Review 2.  Imaging informatics: essential tools for the delivery of imaging services.

Authors:  David S Mendelson; Daniel L Rubin
Journal:  Acad Radiol       Date:  2013-10       Impact factor: 3.173

3.  Automated classification of limb fractures from free-text radiology reports using a clinician-informed gazetteer methodology.

Authors:  Amol Wagholikar; Guido Zuccon; Anthony Nguyen; Kevin Chu; Shane Martin; Kim Lai; Jaimi Greenslade
Journal:  Australas Med J       Date:  2013-05-30

4.  A Roadmap for Foundational Research on Artificial Intelligence in Medical Imaging: From the 2018 NIH/RSNA/ACR/The Academy Workshop.

Authors:  Curtis P Langlotz; Bibb Allen; Bradley J Erickson; Jayashree Kalpathy-Cramer; Keith Bigelow; Tessa S Cook; Adam E Flanders; Matthew P Lungren; David S Mendelson; Jeffrey D Rudie; Ge Wang; Krishna Kandarpa
Journal:  Radiology       Date:  2019-04-16       Impact factor: 11.105

5.  Using Natural Language Processing of Free-Text Radiology Reports to Identify Type 1 Modic Endplate Changes.

Authors:  Hannu T Huhdanpaa; W Katherine Tan; Sean D Rundell; Pradeep Suri; Falgun H Chokshi; Bryan A Comstock; Patrick J Heagerty; Kathryn T James; Andrew L Avins; Srdjan S Nedeljkovic; David R Nerenz; David F Kallmes; Patrick H Luetmer; Karen J Sherman; Nancy L Organ; Brent Griffith; Curtis P Langlotz; David Carrell; Saeed Hassanpour; Jeffrey G Jarvik
Journal:  J Digit Imaging       Date:  2018-02       Impact factor: 4.056

6.  Automatic retrieval of bone fracture knowledge using natural language processing.

Authors:  Bao H Do; Andrew S Wu; Joan Maley; Sandip Biswal
Journal:  J Digit Imaging       Date:  2013-08       Impact factor: 4.056

7.  Using image references in radiology reports to support enhanced report-to-image navigation.

Authors:  Thusitha Mabotuwana; Yuechen Qian; Merlijn Sevenster
Journal:  AMIA Annu Symp Proc       Date:  2013-11-16

8.  Framework for Extracting Critical Findings in Radiology Reports.

Authors:  Thusitha Mabotuwana; Christopher S Hall; Nathan Cross
Journal:  J Digit Imaging       Date:  2020-08       Impact factor: 4.056

9.  Integrating Natural Language Processing and Machine Learning Algorithms to Categorize Oncologic Response in Radiology Reports.

Authors:  Po-Hao Chen; Hanna Zafar; Maya Galperin-Aizenberg; Tessa Cook
Journal:  J Digit Imaging       Date:  2018-04       Impact factor: 4.056

10.  Preparing Medical Imaging Data for Machine Learning.

Authors:  Martin J Willemink; Wojciech A Koszek; Cailin Hardell; Jie Wu; Dominik Fleischmann; Hugh Harvey; Les R Folio; Ronald M Summers; Daniel L Rubin; Matthew P Lungren
Journal:  Radiology       Date:  2020-02-18       Impact factor: 11.105

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