Literature DB >> 32068507

Preparing Medical Imaging Data for Machine Learning.

Martin J Willemink1, Wojciech A Koszek1, Cailin Hardell1, Jie Wu1, Dominik Fleischmann1, Hugh Harvey1, Les R Folio1, Ronald M Summers1, Daniel L Rubin1, Matthew P Lungren1.   

Abstract

Artificial intelligence (AI) continues to garner substantial interest in medical imaging. The potential applications are vast and include the entirety of the medical imaging life cycle from image creation to diagnosis to outcome prediction. The chief obstacles to development and clinical implementation of AI algorithms include availability of sufficiently large, curated, and representative training data that includes expert labeling (eg, annotations). Current supervised AI methods require a curation process for data to optimally train, validate, and test algorithms. Currently, most research groups and industry have limited data access based on small sample sizes from small geographic areas. In addition, the preparation of data is a costly and time-intensive process, the results of which are algorithms with limited utility and poor generalization. In this article, the authors describe fundamental steps for preparing medical imaging data in AI algorithm development, explain current limitations to data curation, and explore new approaches to address the problem of data availability. © RSNA, 2020.

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Year:  2020        PMID: 32068507      PMCID: PMC7104701          DOI: 10.1148/radiol.2020192224

Source DB:  PubMed          Journal:  Radiology        ISSN: 0033-8419            Impact factor:   11.105


  72 in total

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Journal:  Radiology       Date:  2003-05       Impact factor: 11.105

2.  Direct Automatic Coronary Calcium Scoring in Cardiac and Chest CT.

Authors:  Bob D de Vos; Jelmer M Wolterink; Tim Leiner; Pim A de Jong; Nikolas Lessmann; Ivana Isgum
Journal:  IEEE Trans Med Imaging       Date:  2019-02-18       Impact factor: 10.048

3.  DeepLesion: automated mining of large-scale lesion annotations and universal lesion detection with deep learning.

Authors:  Ke Yan; Xiaosong Wang; Le Lu; Ronald M Summers
Journal:  J Med Imaging (Bellingham)       Date:  2018-07-20

4.  Comparative effectiveness of convolutional neural network (CNN) and recurrent neural network (RNN) architectures for radiology text report classification.

Authors:  Imon Banerjee; Yuan Ling; Matthew C Chen; Sadid A Hasan; Curtis P Langlotz; Nathaniel Moradzadeh; Brian Chapman; Timothy Amrhein; David Mong; Daniel L Rubin; Oladimeji Farri; Matthew P Lungren
Journal:  Artif Intell Med       Date:  2018-11-23       Impact factor: 5.326

5.  Computer-aided detection of prostate cancer in MRI.

Authors:  Geert Litjens; Oscar Debats; Jelle Barentsz; Nico Karssemeijer; Henkjan Huisman
Journal:  IEEE Trans Med Imaging       Date:  2014-05       Impact factor: 10.048

6.  A Deep Learning Model to Triage Screening Mammograms: A Simulation Study.

Authors:  Adam Yala; Tal Schuster; Randy Miles; Regina Barzilay; Constance Lehman
Journal:  Radiology       Date:  2019-08-06       Impact factor: 11.105

7.  Assessment of Convolutional Neural Networks for Automated Classification of Chest Radiographs.

Authors:  Jared A Dunnmon; Darvin Yi; Curtis P Langlotz; Christopher Ré; Daniel L Rubin; Matthew P Lungren
Journal:  Radiology       Date:  2018-11-13       Impact factor: 29.146

8.  Free DICOM de-identification tools in clinical research: functioning and safety of patient privacy.

Authors:  K Y E Aryanto; M Oudkerk; P M A van Ooijen
Journal:  Eur Radiol       Date:  2015-06-03       Impact factor: 5.315

Review 9.  The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).

Authors:  Bjoern H Menze; Andras Jakab; Stefan Bauer; Jayashree Kalpathy-Cramer; Keyvan Farahani; Justin Kirby; Yuliya Burren; Nicole Porz; Johannes Slotboom; Roland Wiest; Levente Lanczi; Elizabeth Gerstner; Marc-André Weber; Tal Arbel; Brian B Avants; Nicholas Ayache; Patricia Buendia; D Louis Collins; Nicolas Cordier; Jason J Corso; Antonio Criminisi; Tilak Das; Hervé Delingette; Çağatay Demiralp; Christopher R Durst; Michel Dojat; Senan Doyle; Joana Festa; Florence Forbes; Ezequiel Geremia; Ben Glocker; Polina Golland; Xiaotao Guo; Andac Hamamci; Khan M Iftekharuddin; Raj Jena; Nigel M John; Ender Konukoglu; Danial Lashkari; José Antonió Mariz; Raphael Meier; Sérgio Pereira; Doina Precup; Stephen J Price; Tammy Riklin Raviv; Syed M S Reza; Michael Ryan; Duygu Sarikaya; Lawrence Schwartz; Hoo-Chang Shin; Jamie Shotton; Carlos A Silva; Nuno Sousa; Nagesh K Subbanna; Gabor Szekely; Thomas J Taylor; Owen M Thomas; Nicholas J Tustison; Gozde Unal; Flor Vasseur; Max Wintermark; Dong Hye Ye; Liang Zhao; Binsheng Zhao; Darko Zikic; Marcel Prastawa; Mauricio Reyes; Koen Van Leemput
Journal:  IEEE Trans Med Imaging       Date:  2014-12-04       Impact factor: 10.048

Review 10.  Discrepancy and error in radiology: concepts, causes and consequences.

Authors:  Adrian Brady; Risteárd Ó Laoide; Peter McCarthy; Ronan McDermott
Journal:  Ulster Med J       Date:  2012-01
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  88 in total

1.  Checklist for Artificial Intelligence in Medical Imaging (CLAIM): A Guide for Authors and Reviewers.

Authors:  John Mongan; Linda Moy; Charles E Kahn
Journal:  Radiol Artif Intell       Date:  2020-03-25

2.  Preoperative prediction for pathological grade of hepatocellular carcinoma via machine learning-based radiomics.

Authors:  Bing Mao; Lianzhong Zhang; Peigang Ning; Feng Ding; Fatian Wu; Gary Lu; Yayuan Geng; Jingdong Ma
Journal:  Eur Radiol       Date:  2020-07-22       Impact factor: 5.315

3.  Data valuation for medical imaging using Shapley value and application to a large-scale chest X-ray dataset.

Authors:  Siyi Tang; Amirata Ghorbani; Rikiya Yamashita; Sameer Rehman; Jared A Dunnmon; James Zou; Daniel L Rubin
Journal:  Sci Rep       Date:  2021-04-16       Impact factor: 4.379

4.  Labeling Noncontrast Head CT Reports for Common Findings Using Natural Language Processing.

Authors:  M Iorga; M Drakopoulos; A M Naidech; A K Katsaggelos; T B Parrish; V B Hill
Journal:  AJNR Am J Neuroradiol       Date:  2022-04-28       Impact factor: 3.825

Review 5.  Machine Learning in Pituitary Surgery.

Authors:  Vittorio Stumpo; Victor E Staartjes; Luca Regli; Carlo Serra
Journal:  Acta Neurochir Suppl       Date:  2022

Review 6.  A community-based approach to image analysis of cells, tissues and tumors.

Authors:  Juan Carlos Vizcarra; Erik A Burlingame; Clemens B Hug; Yury Goltsev; Brian S White; Darren R Tyson; Artem Sokolov
Journal:  Comput Med Imaging Graph       Date:  2021-11-19       Impact factor: 4.790

7.  Automatic segmentation of the temporomandibular joint disc on magnetic resonance images using a deep learning technique.

Authors:  Michihito Nozawa; Hirokazu Ito; Yoshiko Ariji; Motoki Fukuda; Chinami Igarashi; Masako Nishiyama; Nobumi Ogi; Akitoshi Katsumata; Kaoru Kobayashi; Eiichiro Ariji
Journal:  Dentomaxillofac Radiol       Date:  2021-08-04       Impact factor: 2.419

Review 8.  Role of Machine Learning and Artificial Intelligence in Interventional Oncology.

Authors:  Brian D'Amore; Sara Smolinski-Zhao; Dania Daye; Raul N Uppot
Journal:  Curr Oncol Rep       Date:  2021-04-20       Impact factor: 5.075

Review 9.  Identification of Tumor-Specific MRI Biomarkers Using Machine Learning (ML).

Authors:  Rima Hajjo; Dima A Sabbah; Sanaa K Bardaweel; Alexander Tropsha
Journal:  Diagnostics (Basel)       Date:  2021-04-21

10.  An international survey on AI in radiology in 1041 radiologists and radiology residents part 2: expectations, hurdles to implementation, and education.

Authors:  Merel Huisman; Erik Ranschaert; William Parker; Domenico Mastrodicasa; Martin Koci; Daniel Pinto de Santos; Francesca Coppola; Sergey Morozov; Marc Zins; Cedric Bohyn; Ural Koç; Jie Wu; Satyam Veean; Dominik Fleischmann; Tim Leiner; Martin J Willemink
Journal:  Eur Radiol       Date:  2021-05-11       Impact factor: 5.315

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