Literature DB >> 22027115

Peroxidase-mimicking DNAzymes for biosensing applications: a review.

Joanna Kosman1, Bernard Juskowiak.   

Abstract

DNAzymes are single stranded DNA molecules that exhibit catalytic activity and are exploited in medicine, biology and material sciences. Development in this area is related to the many advantages of DNAzymes over conventional protein enzymes, such as thermal stability and simpler preparation. DNAzymes with peroxidase-like activity have recently attracted great interest. To assure such catalytic activity, oligonucleotides have to adopt a G-quadruplex structure, which can bind the hemin molecule. This system facilitates a redox reaction between the target molecule and hydrogen peroxide, which results in the appearance of an oxidized target molecule (product). DNAzymes with peroxidase-mimicking activity have great potential in bioanalytical chemistry. This review presents fundamentals concerning the design and engineering of DNAzymes with peroxidase-like activity, describes their properties and spectral characteristics and shows how DNAzymes can contribute to bioanalytical research. Examples of bioanalytical applications of DNAzymes with peroxidase-like activity include nucleic acid probes with DNAzyme labels for the detection of specific DNA sequences in colorimetric or chemiluminescent assays. Assays for telomerase or methyltransferase activity, which are potential targets in anticancer therapy, are also described in this review. Other applications include the determination of metal cations such as Ag(+), K(+), Hg(2+), Pb(2+) or Cu(2+) and amplified detection of small molecules such as adenosine, cocaine or AMP and proteins such as lysozyme or thrombin. In the last decade, DNAzymes have become part of numerous applications in many areas of science from chemistry to biology to medicine.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 22027115     DOI: 10.1016/j.aca.2011.08.050

Source DB:  PubMed          Journal:  Anal Chim Acta        ISSN: 0003-2670            Impact factor:   6.558


  37 in total

1.  Liquid-to-gel transition for visual and tactile detection of biological analytes.

Authors:  Tatiana A Fedotova; Dmitry M Kolpashchikov
Journal:  Chem Commun (Camb)       Date:  2017-11-23       Impact factor: 6.222

2.  Interaction of hemin with quadruplex DNA.

Authors:  Maryam Ghahremani Nasab; Leila Hassani; Sara Mohammadi Nejad; Davood Norouzi
Journal:  J Biol Phys       Date:  2016-10-17       Impact factor: 1.365

3.  Cleavage-based signal amplification of RNA.

Authors:  Yongyun Zhao; Li Zhou; Zhuo Tang
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

Review 4.  DNA as sensors and imaging agents for metal ions.

Authors:  Yu Xiang; Yi Lu
Journal:  Inorg Chem       Date:  2013-12-20       Impact factor: 5.165

5.  Chemiluminescence assay for detection of 2-hydroxyfluorene using the G-quadruplex DNAzyme-H2O2-luminol system.

Authors:  Gang Liang; Yan Man; An Li; Xinxin Jin; Ligang Pan; Xinhui Liu
Journal:  Mikrochim Acta       Date:  2017-12-16       Impact factor: 5.833

6.  Imparting the unique properties of DNA into complex material architectures and functions.

Authors:  Phyllis F Xu; Hyunwoo Noh; Ju Hun Lee; Dylan W Domaille; Matthew A Nakatsuka; Andrew P Goodwin; Jennifer N Cha
Journal:  Mater Today (Kidlington)       Date:  2013-07       Impact factor: 31.041

7.  Toward a Rational Approach to Design Split G-Quadruplex Probes.

Authors:  Ryan P Connelly; Charles Verduzco; Serena Farnell; Tamar Yishay; Yulia V Gerasimova
Journal:  ACS Chem Biol       Date:  2019-10-22       Impact factor: 5.100

8.  Deoxyribozyme cascade for visual detection of bacterial RNA.

Authors:  Yulia V Gerasimova; Evan M Cornett; Emily Edwards; Xiaoli Su; Kyle H Rohde; Dmitry M Kolpashchikov
Journal:  Chembiochem       Date:  2013-09-17       Impact factor: 3.164

9.  Investigation and improvement of catalytic activity of G-quadruplex/hemin DNAzymes using designed terminal G-tetrads with deoxyadenosine caps.

Authors:  Yanwei Cao; Pi Ding; Luyan Yang; Wenjing Li; Yu Luo; Jine Wang; Renjun Pei
Journal:  Chem Sci       Date:  2020-06-17       Impact factor: 9.825

10.  G-quadruplex-forming aptamer enhances the peroxidase activity of myoglobin against luminol.

Authors:  Kaori Tsukakoshi; Yasuko Yamagishi; Mana Kanazashi; Kenta Nakama; Daiki Oshikawa; Nasa Savory; Akimasa Matsugami; Fumiaki Hayashi; Jinhee Lee; Taiki Saito; Koji Sode; Kanjana Khunathai; Hitoshi Kuno; Kazunori Ikebukuro
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

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