Literature DB >> 22015681

Behavior of water in contact with model hydrophobic cavities and tunnels and carbon nanotubes.

E P Schulz1, L M Alarcón, G A Appignanesi.   

Abstract

By means of molecular dynamics simulations we analyze the behavior of water in contact with model hydrophobic cavities and tunnels. We study the hydration and filling propensity of cavities and tunnels carved in alkane monolayers and, for comparison, we also study single-walled carbon nanotubes of similar size. Our results will determine the dependence of the filling propensity as a function of cavity size while revealing the dynamical nature of the process with alternation of filled and dry states. Concerning the tunnels built across the monolayer, we shall show that the minimum diameter in order to get filled is about twice as large as that for the carbon nanotubes, thus evidencing a more hydrophobic behavior. The existence of water-water hydrogen bonds, a necessary condition for penetration, will also be made evident. © EDP Sciences / Società Italiana di Fisica / Springer-Verlag 2011

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Year:  2011        PMID: 22015681     DOI: 10.1140/epje/i2011-11114-8

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  14 in total

1.  Temperature and length scale dependence of hydrophobic effects and their possible implications for protein folding.

Authors:  D M Huang; D Chandler
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-18       Impact factor: 11.205

2.  Chemical physics: How to keep dry in water.

Authors:  Philip Ball
Journal:  Nature       Date:  2003-05-01       Impact factor: 49.962

3.  Insufficiently dehydrated hydrogen bonds as determinants of protein interactions.

Authors:  Ariel Fernández; Harold A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-23       Impact factor: 11.205

4.  Structural and dynamical aspects of water in contact with a hydrophobic surface.

Authors:  D C Malaspina; E P Schulz; L M Alarcón; M A Frechero; G A Appignanesi
Journal:  Eur Phys J E Soft Matter       Date:  2010-05-22       Impact factor: 1.890

5.  Dynamics of water trapped between hydrophobic solutes.

Authors:  Niharendu Choudhury; B Montgomery Pettitt
Journal:  J Phys Chem B       Date:  2005-04-07       Impact factor: 2.991

6.  Hydrophobicity of protein surfaces: Separating geometry from chemistry.

Authors:  Nicolas Giovambattista; Carlos F Lopez; Peter J Rossky; Pablo G Debenedetti
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-11       Impact factor: 11.205

7.  Phase diagram of water in carbon nanotubes.

Authors:  Daisuke Takaiwa; Itaru Hatano; Kenichiro Koga; Hideki Tanaka
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-27       Impact factor: 11.205

8.  A dry ligand-binding cavity in a solvated protein.

Authors:  Johan Qvist; Monika Davidovic; Donald Hamelberg; Bertil Halle
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-21       Impact factor: 11.205

9.  Water clusters in nonpolar cavities.

Authors:  Subramanian Vaitheeswaran; Hao Yin; Jayendran C Rasaiah; Gerhard Hummer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-30       Impact factor: 11.205

Review 10.  Water in nonpolar confinement: from nanotubes to proteins and beyond.

Authors:  Jayendran C Rasaiah; Shekhar Garde; Gerhard Hummer
Journal:  Annu Rev Phys Chem       Date:  2008       Impact factor: 12.703

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  3 in total

1.  A unifying motif of intermolecular cooperativity in protein associations.

Authors:  S R Accordino; J A Rodriguez Fris; G A Appignanesi; A Fernández
Journal:  Eur Phys J E Soft Matter       Date:  2012-07-16       Impact factor: 1.890

2.  Studies on electrostatic interactions within model nano-confined aqueous environments of different chemical nature.

Authors:  Joan Manuel Montes de Oca; Cintia A Menéndez; Sebastián R Accordino; David C Malaspina; Gustavo A Appignanesi
Journal:  Eur Phys J E Soft Matter       Date:  2017-09-20       Impact factor: 1.890

3.  Water populations in restricted environments of lipid membrane interphases.

Authors:  Laureano M Alarcón; M de Los Angeles Frías; Marcela A Morini; M Belén Sierra; Gustavo A Appignanesi; E Anibal Disalvo
Journal:  Eur Phys J E Soft Matter       Date:  2016-10-21       Impact factor: 1.890

  3 in total

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