Literature DB >> 10890881

Temperature and length scale dependence of hydrophobic effects and their possible implications for protein folding.

D M Huang1, D Chandler.   

Abstract

The Lum-Chandler-Weeks theory of hydrophobicity [Lum, K., Chandler, D. & Weeks, J. D. (1999) J. Phys. Chem. 103, 4570-4577] is applied to treat the temperature dependence of hydrophobic solvation in water. The application illustrates how the temperature dependence for hydrophobic surfaces extending less than 1 nm differs significantly from that for surfaces extending more than 1 nm. The latter is the result of water depletion, a collective effect, that appears at length scales of 1 nm and larger. Because of the contrasting behaviors at small and large length scales, hydrophobicity by itself can explain the variable behavior of entropies of protein folding.

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Year:  2000        PMID: 10890881      PMCID: PMC26946          DOI: 10.1073/pnas.120176397

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  Origin of Entropy Convergence in Hydrophobic Hydration and Protein Folding.

Authors: 
Journal:  Phys Rev Lett       Date:  1996-12-09       Impact factor: 9.161

2.  Cavity formation and the drying transition in the lennard-jones fluid

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  2000-02

3.  Protein Structure and the Energetics of Protein Stability.

Authors:  Andrew D. Robertson; Kenneth P. Murphy
Journal:  Chem Rev       Date:  1997-08-05       Impact factor: 60.622

4.  Some factors in the interpretation of protein denaturation.

Authors:  W KAUZMANN
Journal:  Adv Protein Chem       Date:  1959

5.  Solid model compounds and the thermodynamics of protein unfolding.

Authors:  K P Murphy; S J Gill
Journal:  J Mol Biol       Date:  1991-12-05       Impact factor: 5.469

6.  Common features of protein unfolding and dissolution of hydrophobic compounds.

Authors:  K P Murphy; P L Privalov; S J Gill
Journal:  Science       Date:  1990-02-02       Impact factor: 47.728

7.  Gaussian field model of fluids with an application to polymeric fluids.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1993-10

Review 8.  Stability of protein structure and hydrophobic interaction.

Authors:  P L Privalov; S J Gill
Journal:  Adv Protein Chem       Date:  1988

Review 9.  The denatured state (the other half of the folding equation) and its role in protein stability.

Authors:  D Shortle
Journal:  FASEB J       Date:  1996-01       Impact factor: 5.191

10.  Reconciling the magnitude of the microscopic and macroscopic hydrophobic effects.

Authors:  K A Sharp; A Nicholls; R F Fine; B Honig
Journal:  Science       Date:  1991-04-05       Impact factor: 47.728

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  58 in total

1.  Temperature dependence of lysozyme hydration and the role of elastic energy.

Authors:  Hai-Jing Wang; Alfred Kleinhammes; Pei Tang; Yan Xu; Yue Wu
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-03-31

2.  Dewetting-induced collapse of hydrophobic particles.

Authors:  X Huang; C J Margulis; B J Berne
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-24       Impact factor: 11.205

3.  Ultrafast hydration dynamics in protein unfolding: human serum albumin.

Authors:  J K Amisha Kamal; Liang Zhao; Ahmed H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-07       Impact factor: 11.205

4.  Behavior of water in contact with model hydrophobic cavities and tunnels and carbon nanotubes.

Authors:  E P Schulz; L M Alarcón; G A Appignanesi
Journal:  Eur Phys J E Soft Matter       Date:  2011-10-24       Impact factor: 1.890

5.  Impact of chemical heterogeneity on protein self-assembly in water.

Authors:  Song-Ho Chong; Sihyun Ham
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-26       Impact factor: 11.205

6.  Extended surfaces modulate hydrophobic interactions of neighboring solutes.

Authors:  Amish J Patel; Patrick Varilly; Sumanth N Jamadagni; Hari Acharya; Shekhar Garde; David Chandler
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-10       Impact factor: 11.205

7.  Unraveling the hydrophobic effect, one molecule at a time.

Authors:  Shekhar Garde; Amish J Patel
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-28       Impact factor: 11.205

8.  Structural and dynamical aspects of water in contact with a hydrophobic surface.

Authors:  D C Malaspina; E P Schulz; L M Alarcón; M A Frechero; G A Appignanesi
Journal:  Eur Phys J E Soft Matter       Date:  2010-05-22       Impact factor: 1.890

9.  Role of electrostatics in modulating hydrophobic interactions and barriers to hydrophobic assembly.

Authors:  Brad A Bauer; Sandeep Patel
Journal:  J Phys Chem B       Date:  2010-06-24       Impact factor: 2.991

10.  Multibody correlations in the hydrophobic solvation of glycine peptides.

Authors:  Robert C Harris; Justin A Drake; B Montgomery Pettitt
Journal:  J Chem Phys       Date:  2014-12-14       Impact factor: 3.488

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