Literature DB >> 28929428

Studies on electrostatic interactions within model nano-confined aqueous environments of different chemical nature.

Joan Manuel Montes de Oca1, Cintia A Menéndez1, Sebastián R Accordino1, David C Malaspina2, Gustavo A Appignanesi3.   

Abstract

We study the potential of mean force for pairs of parallel flat surfaces with attractive electrostatic interactions by employing model systems functionalized with different charged, hydrophobic and hydrophilic groups. We study the way in which the local environment (hydrophobic or hydrophilic moieties) modulates the interaction between the attractive charged groups on the plates by removing or attracting nearby water and thus screening or not the electrostatic interaction. To explicitly account for the role of the solvent and the local hydrophobicity, we also perform studies in vacuo. Additionally, the results are compared to that for non-charged plates in order to single out and rationalize the non-additivity of the different non-covalent interactions. Our simulations demonstrate that the presence of neighboring hydrophobic groups promote water removal in the vicinity of the charged groups, thus enhancing charge attraction upon self-assembly. This role of the local hydrophobicity modulating electrostatic interactions is consistent with recent qualitative descriptions in the protein binding context.

Entities:  

Keywords:  Flowing Matter: Liquids and Complex Fluids

Year:  2017        PMID: 28929428     DOI: 10.1140/epje/i2017-11568-6

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  35 in total

1.  Computational studies of pressure, temperature, and surface effects on the structure and thermodynamics of confined water.

Authors:  N Giovambattista; P J Rossky; P G Debenedetti
Journal:  Annu Rev Phys Chem       Date:  2012       Impact factor: 12.703

2.  Wrapping mimicking in drug-like small molecules disruptive of protein-protein interfaces.

Authors:  Sebastián R Accordino; Marcela A Morini; María Belén Sierra; J Ariel Rodríguez Fris; Gustavo A Appignanesi; Ariel Fernández
Journal:  Proteins       Date:  2012-04-16

3.  Mapping hydrophobicity at the nanoscale: applications to heterogeneous surfaces and proteins.

Authors:  Hari Acharya; Srivathsan Vembanur; Sumanth N Jamadagni; Shekhar Garde
Journal:  Faraday Discuss       Date:  2010       Impact factor: 4.008

4.  Automatic atom type and bond type perception in molecular mechanical calculations.

Authors:  Junmei Wang; Wei Wang; Peter A Kollman; David A Case
Journal:  J Mol Graph Model       Date:  2006-02-03       Impact factor: 2.518

5.  Understanding the stabilization of liquid-phase-exfoliated graphene in polar solvents: molecular dynamics simulations and kinetic theory of colloid aggregation.

Authors:  Chih-Jen Shih; Shangchao Lin; Michael S Strano; Daniel Blankschtein
Journal:  J Am Chem Soc       Date:  2010-10-20       Impact factor: 15.419

6.  Water clusters in nonpolar cavities.

Authors:  Subramanian Vaitheeswaran; Hao Yin; Jayendran C Rasaiah; Gerhard Hummer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-30       Impact factor: 11.205

7.  Hydrophilic behavior of graphene and graphene-based materials.

Authors:  Sebastián R Accordino; Joan Manuel Montes de Oca; J Ariel Rodriguez Fris; Gustavo A Appignanesi
Journal:  J Chem Phys       Date:  2015-10-21       Impact factor: 3.488

Review 8.  Water in nonpolar confinement: from nanotubes to proteins and beyond.

Authors:  Jayendran C Rasaiah; Shekhar Garde; Gerhard Hummer
Journal:  Annu Rev Phys Chem       Date:  2008       Impact factor: 12.703

9.  'Double water exclusion': a hypothesis refining the O-ring theory for the hot spots at protein interfaces.

Authors:  Jinyan Li; Qian Liu
Journal:  Bioinformatics       Date:  2009-01-29       Impact factor: 6.937

10.  Wrapping effects within a proposed function-rescue strategy for the Y220C oncogenic mutation of protein p53.

Authors:  Sebastián R Accordino; J Ariel Rodríguez Fris; Gustavo A Appignanesi
Journal:  PLoS One       Date:  2013-01-24       Impact factor: 3.240

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  1 in total

1.  Ionic Transport in Electrostatic Janus Membranes. An Explicit Solvent Molecular Dynamic Simulation.

Authors:  Joan M Montes de Oca; Johnson Dhanasekaran; Andrés Córdoba; Seth B Darling; Juan J de Pablo
Journal:  ACS Nano       Date:  2022-03-01       Impact factor: 15.881

  1 in total

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