Literature DB >> 21956914

Connections between 3'-end processing and DNA damage response.

Murat A Cevher1, Frida E Kleiman.   

Abstract

The cellular DNA damage response (DDR) involves changes in the functional and structural properties of a number of nuclear proteins, resulting in a coordinated control of gene expression and DNA repair. This response includes functional interactions of the DNA repair, transcription, and RNA processing machineries. Following DNA damage, cellular levels of polyadenylated transcripts are transiently decreased and normal recovery depends on transcription-coupled repair (TCR). In addition, DNA damage has gene-specific effects regulating the mRNA levels of factors involved in the DDR itself at different times after the damage. The 3'-end processing machinery, which is important in the regulation of mRNA stability, is involved in these general and gene-specific responses to DNA damage. The role of 3'-end processing in DDR supports the idea that the steady-state levels of different mRNAs change upon DNA-damaging conditions as a result of regulation of not only their biosynthesis but also their turnover. Here, we review the mechanistic connections between 3'-end processing and DDR, and discuss the implications of deregulation of this important step of mRNA maturation in the cellular recovery after DNA-damaging treatment. The relevance of these functional connections is illustrated by the increasing number of reports on this relatively unexplored field. 2010 John Wiley & Sons, Ltd.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 21956914      PMCID: PMC3229193          DOI: 10.1002/wrna.20

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  35 in total

1.  The BARD1-CstF-50 interaction links mRNA 3' end formation to DNA damage and tumor suppression.

Authors:  F E Kleiman; J L Manley
Journal:  Cell       Date:  2001-03-09       Impact factor: 41.582

2.  HuR regulates p21 mRNA stabilization by UV light.

Authors:  W Wang; H Furneaux; H Cheng; M C Caldwell; D Hutter; Y Liu; N Holbrook; M Gorospe
Journal:  Mol Cell Biol       Date:  2000-02       Impact factor: 4.272

Review 3.  The BRCA1/BARD1 heterodimer, a tumor suppressor complex with ubiquitin E3 ligase activity.

Authors:  Richard Baer; Thomas Ludwig
Journal:  Curr Opin Genet Dev       Date:  2002-02       Impact factor: 5.578

Review 4.  3' end mRNA processing: molecular mechanisms and implications for health and disease.

Authors:  Sven Danckwardt; Matthias W Hentze; Andreas E Kulozik
Journal:  EMBO J       Date:  2008-02-06       Impact factor: 11.598

5.  Posttranscriptional regulation of the RAD5 DNA repair gene by the Dun1 kinase and the Pan2-Pan3 poly(A)-nuclease complex contributes to survival of replication blocks.

Authors:  Andrew Hammet; Brietta L Pike; Jörg Heierhorst
Journal:  J Biol Chem       Date:  2002-04-12       Impact factor: 5.157

6.  Cell cycle progression in G1 and S phases is CCR4 dependent following ionizing radiation or replication stress in Saccharomyces cerevisiae.

Authors:  Tammy J Westmoreland; Jeffrey R Marks; John A Olson; Eric M Thompson; Michael A Resnick; Craig B Bennett
Journal:  Eukaryot Cell       Date:  2004-04

7.  Evidence for general stabilization of mRNAs in response to UV light.

Authors:  Frank Bollig; Reinhard Winzen; Michael Kracht; Beniam Ghebremedhin; Birgit Ritter; Arno Wilhelm; Klaus Resch; Helmut Holtmann
Journal:  Eur J Biochem       Date:  2002-12

8.  Validation of housekeeping genes for normalizing RNA expression in real-time PCR.

Authors:  Keertan Dheda; Jim F Huggett; Stephen A Bustin; Margaret A Johnson; Graham Rook; Alimuddin Zumla
Journal:  Biotechniques       Date:  2004-07       Impact factor: 1.993

9.  Up-regulation of P-TEFb by the MEK1-extracellular signal-regulated kinase signaling pathway contributes to stimulated transcription elongation of immediate early genes in neuroendocrine cells.

Authors:  Toshitsugu Fujita; Stephan Ryser; Isabelle Piuz; Werner Schlegel
Journal:  Mol Cell Biol       Date:  2007-12-17       Impact factor: 4.272

10.  Identification of new reference genes for the normalisation of canine osteoarthritic joint tissue transcripts from microarray data.

Authors:  Lindsey J Maccoux; Dylan N Clements; Fiona Salway; Philip J R Day
Journal:  BMC Mol Biol       Date:  2007-07-25       Impact factor: 2.946

View more
  14 in total

Review 1.  To polyadenylate or to deadenylate: that is the question.

Authors:  Xiaokan Zhang; Anders Virtanen; Frida E Kleiman
Journal:  Cell Cycle       Date:  2010-11-15       Impact factor: 4.534

Review 2.  Maintenance of genome stability: the unifying role of interconnections between the DNA damage response and RNA-processing pathways.

Authors:  B Mikolaskova; M Jurcik; I Cipakova; M Kretova; M Chovanec; L Cipak
Journal:  Curr Genet       Date:  2018-03-01       Impact factor: 3.886

3.  Stimulation of RNA Polymerase II ubiquitination and degradation by yeast mRNA 3'-end processing factors is a conserved DNA damage response in eukaryotes.

Authors:  Jason N Kuehner; James W Kaufman; Claire Moore
Journal:  DNA Repair (Amst)       Date:  2017-07-23

Review 4.  Post-transcriptional regulation of DNA damage-responsive gene expression.

Authors:  Bruce C McKay
Journal:  Antioxid Redox Signal       Date:  2013-09-12       Impact factor: 8.401

5.  Positive and negative feedback loops in the p53 and mRNA 3' processing pathways.

Authors:  Emral Devany; Xiaokan Zhang; Ji Yeon Park; Bin Tian; Frida Esther Kleiman
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-11       Impact factor: 11.205

Review 6.  Connections between 3' end processing and DNA damage response: Ten years later.

Authors:  Michael Robert Murphy; Frida Esther Kleiman
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-10-28       Impact factor: 9.957

7.  Structure and function of pre-mRNA 5'-end capping quality control and 3'-end processing.

Authors:  Ashley R Jurado; Dazhi Tan; Xinfu Jiao; Megerditch Kiledjian; Liang Tong
Journal:  Biochemistry       Date:  2014-03-20       Impact factor: 3.162

8.  Poly(A) RNAs including coding proteins RNAs occur in plant Cajal bodies.

Authors:  Janusz Niedojadło; Ewa Kubicka; Beata Kalich; Dariusz J Smoliński
Journal:  PLoS One       Date:  2014-11-04       Impact factor: 3.240

9.  The τCstF-64 polyadenylation protein controls genome expression in testis.

Authors:  Wencheng Li; Hsiang-Jui Yeh; Ganesh S Shankarling; Zhe Ji; Bin Tian; Clinton C MacDonald
Journal:  PLoS One       Date:  2012-10-26       Impact factor: 3.240

10.  DNA damage induces targeted, genome-wide variation of poly(A) sites in budding yeast.

Authors:  Joel H Graber; Fathima I Nazeer; Pei-chun Yeh; Jason N Kuehner; Sneha Borikar; Derick Hoskinson; Claire L Moore
Journal:  Genome Res       Date:  2013-06-20       Impact factor: 9.043

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.