Literature DB >> 29497809

Maintenance of genome stability: the unifying role of interconnections between the DNA damage response and RNA-processing pathways.

B Mikolaskova1, M Jurcik1, I Cipakova1, M Kretova1, M Chovanec1, L Cipak2.   

Abstract

Endogenous and exogenous factors can severely affect the integrity of genetic information by inducing DNA damage and impairing genome stability. The protection of genome integrity is ensured by the so-called "DNA damage response" (DDR), a set of evolutionary-conserved events that, triggered upon DNA damage detection, arrests the cell cycle, and attempts DNA repair. Here, we review the role of the DDR proteins as post-transcriptional regulators of gene expression, in addition to their roles in DNA damage recognition, signaling, and repair. At the same time, we discuss recent insights into how pre-mRNA splicing factors go beyond their splicing activities and play direct functions in detecting, signaling, and repairing DNA damage. The importance of extensive two-way crosstalk and interaction between the RNA processing and the DDR stems from growing evidence that the defects of their communication lead to genomic instability.

Keywords:  DNA damage response; DNA repair; Genome stability; R-loops; RNA processing

Mesh:

Substances:

Year:  2018        PMID: 29497809     DOI: 10.1007/s00294-018-0819-7

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  138 in total

1.  Human 100-kDa homologous DNA-pairing protein is the splicing factor PSF and promotes DNA strand invasion.

Authors:  A T Akhmedov; B S Lopez
Journal:  Nucleic Acids Res       Date:  2000-08-15       Impact factor: 16.971

2.  Cotranscriptionally formed DNA:RNA hybrids mediate transcription elongation impairment and transcription-associated recombination.

Authors:  Pablo Huertas; Andrés Aguilera
Journal:  Mol Cell       Date:  2003-09       Impact factor: 17.970

3.  The Prp19/Pso4 core complex undergoes ubiquitylation and structural alterations in response to DNA damage.

Authors:  Xiaoyan Lu; Randy J Legerski
Journal:  Biochem Biophys Res Commun       Date:  2007-01-26       Impact factor: 3.575

4.  The role of the human psoralen 4 (hPso4) protein complex in replication stress and homologous recombination.

Authors:  Mohammad Abbas; Ilanchezhian Shanmugam; Manal Bsaili; Robert Hromas; Monte Shaheen
Journal:  J Biol Chem       Date:  2014-03-26       Impact factor: 5.157

5.  Isolation of XAB2 complex involved in pre-mRNA splicing, transcription, and transcription-coupled repair.

Authors:  Isao Kuraoka; Shinsuke Ito; Tadashi Wada; Mika Hayashida; Lily Lee; Masafumi Saijo; Yoshimichi Nakatsu; Megumi Matsumoto; Tsukasa Matsunaga; Hiroshi Handa; Jun Qin; Yoshihiro Nakatani; Kiyoji Tanaka
Journal:  J Biol Chem       Date:  2007-11-02       Impact factor: 5.157

6.  Specific phosphorylation of SR proteins by mammalian DNA topoisomerase I.

Authors:  F Rossi; E Labourier; T Forné; G Divita; J Derancourt; J F Riou; E Antoine; G Cathala; C Brunel; J Tazi
Journal:  Nature       Date:  1996-05-02       Impact factor: 49.962

7.  CDK11 complexes promote pre-mRNA splicing.

Authors:  Dongli Hu; Akila Mayeda; Janeen H Trembley; Jill M Lahti; Vincent J Kidd
Journal:  J Biol Chem       Date:  2002-12-24       Impact factor: 5.157

8.  Site-specific DICER and DROSHA RNA products control the DNA-damage response.

Authors:  Sofia Francia; Flavia Michelini; Alka Saxena; Dave Tang; Michiel de Hoon; Viviana Anelli; Marina Mione; Piero Carninci; Fabrizio d'Adda di Fagagna
Journal:  Nature       Date:  2012-08-09       Impact factor: 49.962

9.  Psip1/Ledgf p52 binds methylated histone H3K36 and splicing factors and contributes to the regulation of alternative splicing.

Authors:  Madapura M Pradeepa; Heidi G Sutherland; Jernej Ule; Graeme R Grimes; Wendy A Bickmore
Journal:  PLoS Genet       Date:  2012-05-17       Impact factor: 5.917

Review 10.  Roles of RNA-Binding Proteins in DNA Damage Response.

Authors:  Mihoko Kai
Journal:  Int J Mol Sci       Date:  2016-02-27       Impact factor: 5.923

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  18 in total

Review 1.  Splicing alterations contributing to cancer hallmarks in the liver: central role of dedifferentiation and genome instability.

Authors:  Maddalen Jimenez; María Arechederra; Matías A Ávila; Carmen Berasain
Journal:  Transl Gastroenterol Hepatol       Date:  2018-10-31

Review 2.  IT'S 2 for the price of 1: Multifaceted ITS2 processing machines in RNA and DNA maintenance.

Authors:  Monica C Pillon; Yu-Hua Lo; Robin E Stanley
Journal:  DNA Repair (Amst)       Date:  2019-07-08

Review 3.  DksA and DNA double-strand break repair.

Authors:  Kamila K Myka; Max E Gottesman
Journal:  Curr Genet       Date:  2019-05-10       Impact factor: 3.886

Review 4.  The functional complexity of the RNA-binding protein Yra1: mRNA biogenesis, genome stability and DSB repair.

Authors:  Valentina Infantino; Françoise Stutz
Journal:  Curr Genet       Date:  2019-07-10       Impact factor: 3.886

5.  Multi-omics data integration analysis identifies the spliceosome as a key regulator of DNA double-strand break repair.

Authors:  Dana Sherill-Rofe; Oded Raban; Steven Findlay; Dolev Rahat; Irene Unterman; Arash Samiei; Amber Yasmeen; Zafir Kaiser; Hellen Kuasne; Morag Park; William D Foulkes; Idit Bloch; Aviad Zick; Walter H Gotlieb; Yuval Tabach; Alexandre Orthwein
Journal:  NAR Cancer       Date:  2022-04-08

6.  KDM3A regulates alternative splicing of cell-cycle genes following DNA damage.

Authors:  Mai Baker; Mayra Petasny; Nadeen Taqatqa; Mercedes Bentata; Gillian Kay; Eden Engal; Yuval Nevo; Ahmad Siam; Sara Dahan; Maayan Salton
Journal:  RNA       Date:  2021-07-28       Impact factor: 4.942

7.  RNA processing genes characterize RNA splicing and further stratify colorectal cancer.

Authors:  Xiaofan Lu; Yujie Zhou; Jialin Meng; Liyun Jiang; Jun Gao; Yu Cheng; Hangyu Yan; Yang Wang; Bing Zhang; Xiaobo Li; Fangrong Yan
Journal:  Cell Prolif       Date:  2020-06-28       Impact factor: 6.831

8.  The Yeast PCNA Unloader Elg1 RFC-Like Complex Plays a Role in Eliciting the DNA Damage Checkpoint.

Authors:  Soumitra Sau; Batia Liefshitz; Martin Kupiec
Journal:  mBio       Date:  2019-06-11       Impact factor: 7.867

Review 9.  Ionizing Radiation and Translation Control: A Link to Radiation Hormesis?

Authors:  Usha Kabilan; Tyson E Graber; Tommy Alain; Dmitry Klokov
Journal:  Int J Mol Sci       Date:  2020-09-11       Impact factor: 5.923

Review 10.  Alternative Splicing and DNA Damage Response in Plants.

Authors:  Barbara Anna Nimeth; Stefan Riegler; Maria Kalyna
Journal:  Front Plant Sci       Date:  2020-02-19       Impact factor: 6.627

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