Literature DB >> 21921199

TAF1B is a TFIIB-like component of the basal transcription machinery for RNA polymerase I.

Srivatsava Naidu1, J Karsten Friedrich, Jackie Russell, Joost C B M Zomerdijk.   

Abstract

Transcription by eukaryotic RNA polymerases (Pols) II and III and archaeal Pol requires structurally related general transcription factors TFIIB, Brf1, and TFB, respectively, which are essential for polymerase recruitment and initiation events. A TFIIB-like protein was not evident in the Pol I basal transcription machinery. We report that TAF1B, a subunit of human Pol I basal transcription factor SL1, is structurally related to TFIIB/TFIIB-like proteins, through predicted amino-terminal zinc ribbon and cyclin-like fold domains. SL1, essential for Pol I recruitment to the ribosomal RNA gene promoter, also has an essential postpolymerase recruitment role, operating through TAF1B. Therefore, a TFIIB-related protein is implicated in preinitiation complex assembly and postpolymerase recruitment events in Pol I transcription, underscoring the parallels between eukaryotic Pol I, II, and III and archaeal transcription machineries.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21921199      PMCID: PMC3566551          DOI: 10.1126/science.1207656

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  29 in total

1.  A novel TBP-associated factor of SL1 functions in RNA polymerase I transcription.

Authors:  Julia J Gorski; Shalini Pathak; Kostya Panov; Taciana Kasciukovic; Tanya Panova; Jackie Russell; Joost C B M Zomerdijk
Journal:  EMBO J       Date:  2007-02-22       Impact factor: 11.598

Review 2.  TFIIB and the regulation of transcription by RNA polymerase II.

Authors:  Wensheng Deng; Stefan G E Roberts
Journal:  Chromosoma       Date:  2007-06-26       Impact factor: 4.316

3.  Interaction of the TFIIB zinc ribbon with RNA polymerase II.

Authors:  Laura M Elsby; Stefan G E Roberts
Journal:  Biochem Soc Trans       Date:  2008-08       Impact factor: 5.407

4.  The plant-specific TFIIB-related protein, pBrp, is a general transcription factor for RNA polymerase I.

Authors:  Sousuke Imamura; Mitsumasa Hanaoka; Kan Tanaka
Journal:  EMBO J       Date:  2008-09-03       Impact factor: 11.598

5.  RNA polymerase II-TFIIB structure and mechanism of transcription initiation.

Authors:  Dirk Kostrewa; Mirijam E Zeller; Karim-Jean Armache; Martin Seizl; Kristin Leike; Michael Thomm; Patrick Cramer
Journal:  Nature       Date:  2009-11-19       Impact factor: 49.962

Review 6.  Evolution of multisubunit RNA polymerases in the three domains of life.

Authors:  Finn Werner; Dina Grohmann
Journal:  Nat Rev Microbiol       Date:  2011-02       Impact factor: 60.633

7.  Direct modulation of RNA polymerase core functions by basal transcription factors.

Authors:  Finn Werner; Robert O J Weinzierl
Journal:  Mol Cell Biol       Date:  2005-09       Impact factor: 4.272

8.  TBP-TAF complex SL1 directs RNA polymerase I pre-initiation complex formation and stabilizes upstream binding factor at the rDNA promoter.

Authors:  J Karsten Friedrich; Kostya I Panov; Pavel Cabart; Jackie Russell; Joost C B M Zomerdijk
Journal:  J Biol Chem       Date:  2005-06-21       Impact factor: 5.157

9.  Structure of an RNA polymerase II-TFIIB complex and the transcription initiation mechanism.

Authors:  Xin Liu; David A Bushnell; Dong Wang; Guillermo Calero; Roger D Kornberg
Journal:  Science       Date:  2009-11-12       Impact factor: 47.728

10.  Control of the timing of promoter escape and RNA catalysis by the transcription factor IIb fingertip.

Authors:  Khiem Tran; Jay D Gralla
Journal:  J Biol Chem       Date:  2008-04-14       Impact factor: 5.157

View more
  29 in total

1.  Mapping the protein interaction network for TFIIB-related factor Brf1 in the RNA polymerase III preinitiation complex.

Authors:  Seok-Kooi Khoo; Chih-Chien Wu; Yu-Chun Lin; Jin-Cheng Lee; Hung-Ta Chen
Journal:  Mol Cell Biol       Date:  2013-11-25       Impact factor: 4.272

Review 2.  Structural insights into transcription initiation by RNA polymerase II.

Authors:  Sebastian Grünberg; Steven Hahn
Journal:  Trends Biochem Sci       Date:  2013-10-11       Impact factor: 13.807

3.  RNA polymerase III subunit architecture and implications for open promoter complex formation.

Authors:  Chih-Chien Wu; Franz Herzog; Stefan Jennebach; Yu-Chun Lin; Chih-Yu Pai; Ruedi Aebersold; Patrick Cramer; Hung-Ta Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-06       Impact factor: 11.205

4.  Molecular basis of Rrn3-regulated RNA polymerase I initiation and cell growth.

Authors:  Claudia Blattner; Stefan Jennebach; Franz Herzog; Andreas Mayer; Alan C M Cheung; Gregor Witte; Kristina Lorenzen; Karl-Peter Hopfner; Albert J R Heck; Ruedi Aebersold; Patrick Cramer
Journal:  Genes Dev       Date:  2011-09-22       Impact factor: 11.361

Review 5.  Eukaryotic transcription initiation machinery visualized at molecular level.

Authors:  Yan Han; Yuan He
Journal:  Transcription       Date:  2016-10-19

6.  A Region of Bdp1 Necessary for Transcription Initiation That Is Located within the RNA Polymerase III Active Site Cleft.

Authors:  Hui-Lan Hu; Chih-Chien Wu; Jin-Cheng Lee; Hung-Ta Chen
Journal:  Mol Cell Biol       Date:  2015-06-08       Impact factor: 4.272

7.  Changes in rRNA transcription influence proliferation and cell fate within a stem cell lineage.

Authors:  Qiao Zhang; Nevine A Shalaby; Michael Buszczak
Journal:  Science       Date:  2014-01-17       Impact factor: 47.728

Review 8.  Dysregulation of the basal RNA polymerase transcription apparatus in cancer.

Authors:  Megan J Bywater; Richard B Pearson; Grant A McArthur; Ross D Hannan
Journal:  Nat Rev Cancer       Date:  2013-05       Impact factor: 60.716

Review 9.  Basic mechanisms in RNA polymerase I transcription of the ribosomal RNA genes.

Authors:  Sarah J Goodfellow; Joost C B M Zomerdijk
Journal:  Subcell Biochem       Date:  2013

Review 10.  TFIIB-related factors in RNA polymerase I transcription.

Authors:  Bruce A Knutson; Steven Hahn
Journal:  Biochim Biophys Acta       Date:  2012-08-30
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.