Literature DB >> 27658022

Eukaryotic transcription initiation machinery visualized at molecular level.

Yan Han1, Yuan He1.   

Abstract

The structures of RNA Polymerase (Pol) II pre-initiation complexes (PIC) have recently been determined at near-atomic resolution, elucidating unprecedented mechanistic details of promoter opening during transcription initiation. The key structural features of promoter opening are summarized here. Structural knowledge of Pol I and III PIC is also briefly discussed.

Entities:  

Keywords:  RNA polymerase; general transcription factor; pre-initiation complex; promoter opening; transcription initiation

Mesh:

Substances:

Year:  2016        PMID: 27658022      PMCID: PMC5066506          DOI: 10.1080/21541264.2016.1237150

Source DB:  PubMed          Journal:  Transcription        ISSN: 2154-1272


  40 in total

Review 1.  Recruitment of RNA polymerase III to its target promoters.

Authors:  Laura Schramm; Nouria Hernandez
Journal:  Genes Dev       Date:  2002-10-15       Impact factor: 11.361

2.  RNA polymerase II-associated proteins are required for a DNA conformation change in the transcription initiation complex.

Authors:  S Buratowski; M Sopta; J Greenblatt; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1991-09-01       Impact factor: 11.205

3.  Mapping the protein interaction network for TFIIB-related factor Brf1 in the RNA polymerase III preinitiation complex.

Authors:  Seok-Kooi Khoo; Chih-Chien Wu; Yu-Chun Lin; Jin-Cheng Lee; Hung-Ta Chen
Journal:  Mol Cell Biol       Date:  2013-11-25       Impact factor: 4.272

4.  Architecture of the RNA polymerase II-Mediator core initiation complex.

Authors:  C Plaschka; L Larivière; L Wenzeck; M Seizl; M Hemann; D Tegunov; E V Petrotchenko; C H Borchers; W Baumeister; F Herzog; E Villa; P Cramer
Journal:  Nature       Date:  2015-02-04       Impact factor: 49.962

5.  Multiple forms of DNA-dependent RNA polymerase in eukaryotic organisms.

Authors:  R G Roeder; W J Rutter
Journal:  Nature       Date:  1969-10-18       Impact factor: 49.962

6.  TAF1B is a TFIIB-like component of the basal transcription machinery for RNA polymerase I.

Authors:  Srivatsava Naidu; J Karsten Friedrich; Jackie Russell; Joost C B M Zomerdijk
Journal:  Science       Date:  2011-09-16       Impact factor: 47.728

7.  RNA polymerase I structure and transcription regulation.

Authors:  Christoph Engel; Sarah Sainsbury; Alan C Cheung; Dirk Kostrewa; Patrick Cramer
Journal:  Nature       Date:  2013-10-23       Impact factor: 49.962

8.  Structure of an RNA polymerase II-TFIIB complex and the transcription initiation mechanism.

Authors:  Xin Liu; David A Bushnell; Dong Wang; Guillermo Calero; Roger D Kornberg
Journal:  Science       Date:  2009-11-12       Impact factor: 47.728

9.  Architecture of the RNA polymerase II preinitiation complex and mechanism of ATP-dependent promoter opening.

Authors:  Sebastian Grünberg; Linda Warfield; Steven Hahn
Journal:  Nat Struct Mol Biol       Date:  2012-07-01       Impact factor: 15.369

10.  Structure of promoter-bound TFIID and model of human pre-initiation complex assembly.

Authors:  Robert K Louder; Yuan He; José Ramón López-Blanco; Jie Fang; Pablo Chacón; Eva Nogales
Journal:  Nature       Date:  2016-03-23       Impact factor: 49.962

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  3 in total

Review 1.  Target acquired: transcriptional regulators as drug targets for protozoan parasites.

Authors:  H A Walters; L A Temesvari
Journal:  Int J Parasitol       Date:  2021-03-13       Impact factor: 4.330

2.  Structural mechanism of ATP-independent transcription initiation by RNA polymerase I.

Authors:  Yan Han; Chunli Yan; Thi Hoang Duong Nguyen; Ashleigh J Jackobel; Ivaylo Ivanov; Bruce A Knutson; Yuan He
Journal:  Elife       Date:  2017-06-17       Impact factor: 8.140

3.  Spt4 Promotes Pol I Processivity and Transcription Elongation.

Authors:  Abigail K Huffines; Yvonne J K Edwards; David A Schneider
Journal:  Genes (Basel)       Date:  2021-03-12       Impact factor: 4.141

  3 in total

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