Literature DB >> 21911397

Signature of hydrophobic hydration in a single polymer.

Isaac T S Li1, Gilbert C Walker.   

Abstract

Hydrophobicity underpins self-assembly in many natural and synthetic molecular and nanoscale systems. A signature of hydrophobicity is its temperature dependence. The first experimental evaluation of the temperature and size dependence of hydration free energy in a single hydrophobic polymer is reported, which tests key assumptions in models of hydrophobic interactions in protein folding. Herein, the hydration free energy required to extend three hydrophobic polymers with differently sized aromatic side chains was directly measured by single molecule force spectroscopy. The results are threefold. First, the hydration free energy per monomer is found to be strongly dependent on temperature and does not follow interfacial thermodynamics. Second, the temperature dependence profiles are distinct among the three hydrophobic polymers as a result of a hydrophobic size effect at the subnanometer scale. Third, the hydration free energy of a monomer on a macromolecule is different from a free monomer; corrections for the reduced hydration free energy due to hydrophobic interaction from neighboring units are required.

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Year:  2011        PMID: 21911397      PMCID: PMC3189081          DOI: 10.1073/pnas.1105450108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Temperature and length scale dependence of hydrophobic effects and their possible implications for protein folding.

Authors:  D M Huang; D Chandler
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-18       Impact factor: 11.205

2.  Global thermodynamics of hydrophobic cavitation, dewetting, and hydration.

Authors:  Dor Ben-Amotz
Journal:  J Chem Phys       Date:  2005-11-08       Impact factor: 3.488

3.  Self-organization in protein folding and the hydrophobic interaction.

Authors:  Bernard S Gerstman; Prem P Chapagain
Journal:  J Chem Phys       Date:  2005-08-01       Impact factor: 3.488

4.  Interfacial free energy and the hydrophobic effect.

Authors:  C Tanford
Journal:  Proc Natl Acad Sci U S A       Date:  1979-09       Impact factor: 11.205

5.  Thrombogenic collagen-mimetic peptides: Self-assembly of triple helix-based fibrils driven by hydrophobic interactions.

Authors:  Mabel A Cejas; William A Kinney; Cailin Chen; Jeremy G Vinter; Harold R Almond; Karin M Balss; Cynthia A Maryanoff; Ute Schmidt; Michael Breslav; Andrew Mahan; Eilyn Lacy; Bruce E Maryanoff
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-16       Impact factor: 11.205

6.  Single molecular anatomy of solvophobic effects in host-guest interactions based on surface tension using atomic force microscopy.

Authors:  Satoshi Yasuda; Iwao Suzuki; Ken-ichi Shinohara; Hidemi Shigekawa
Journal:  Phys Rev Lett       Date:  2006-06-08       Impact factor: 9.161

7.  Effects of lengthscales and attractions on the collapse of hydrophobic polymers in water.

Authors:  Manoj V Athawale; Gaurav Goel; Tuhin Ghosh; Thomas M Truskett; Shekhar Garde
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-10       Impact factor: 11.205

8.  Reconciling the magnitude of the microscopic and macroscopic hydrophobic effects.

Authors:  K A Sharp; A Nicholls; R F Fine; B Honig
Journal:  Science       Date:  1991-04-05       Impact factor: 47.728

9.  Hydrophobic collapse in multidomain protein folding.

Authors:  Ruhong Zhou; Xuhui Huang; Claudio J Margulis; Bruce J Berne
Journal:  Science       Date:  2004-09-10       Impact factor: 47.728

10.  Interactions between a polystyrene particle and hydrophilic and hydrophobic surfaces in aqueous solutions.

Authors:  Esben Thormann; Adam C Simonsen; Per L Hansen; Ole G Mouritsen
Journal:  Langmuir       Date:  2008-06-14       Impact factor: 3.882

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  26 in total

1.  Biophysics: More than a bystander.

Authors:  Philip Ball
Journal:  Nature       Date:  2011-10-26       Impact factor: 49.962

2.  Gas-liquid transfer data used to analyze hydrophobic hydration and find the nature of the Kauzmann-Tanford hydrophobic factor.

Authors:  Robert L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-23       Impact factor: 11.205

3.  Unraveling the hydrophobic effect, one molecule at a time.

Authors:  Shekhar Garde; Amish J Patel
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-28       Impact factor: 11.205

4.  Site-specific hydration dynamics of globular proteins and the role of constrained water in solvent exchange with amphiphilic cosolvents.

Authors:  John T King; Evan J Arthur; Charles L Brooks; Kevin J Kubarych
Journal:  J Phys Chem B       Date:  2012-05-07       Impact factor: 2.991

5.  On the cooperative formation of non-hydrogen-bonded water at molecular hydrophobic interfaces.

Authors:  Joel G Davis; Blake M Rankin; Kamil P Gierszal; Dor Ben-Amotz
Journal:  Nat Chem       Date:  2013-07-21       Impact factor: 24.427

6.  How osmolytes influence hydrophobic polymer conformations: A unified view from experiment and theory.

Authors:  Jagannath Mondal; Duncan Halverson; Isaac T S Li; Guillaume Stirnemann; Gilbert C Walker; Bruce J Berne
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-13       Impact factor: 11.205

7.  Volumetric and calorimetric properties of aqueous ionene solutions.

Authors:  Miha Lukšič; Barbara Hribar-Lee
Journal:  J Mol Liq       Date:  2016-09-23       Impact factor: 6.165

8.  Patchy supramolecules as versatile tools to probe hydrophobicity in nanoglobular systems.

Authors:  Luis M Negrón; Yazmary Meléndez-Contés; José M Rivera
Journal:  J Am Chem Soc       Date:  2013-02-27       Impact factor: 15.419

9.  When does trimethylamine N-oxide fold a polymer chain and urea unfold it?

Authors:  Jagannath Mondal; Guillaume Stirnemann; B J Berne
Journal:  J Phys Chem B       Date:  2013-07-10       Impact factor: 2.991

10.  Effects of Mutations on the Reconfiguration Rate of α-Synuclein.

Authors:  Srabasti Acharya; Shreya Saha; Basir Ahmad; Lisa J Lapidus
Journal:  J Phys Chem B       Date:  2015-12-04       Impact factor: 2.991

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