Literature DB >> 21808982

Epigenetic control of embryonic stem cell differentiation.

Lyle Armstrong1.   

Abstract

Pluripotent embryonic stem cells can give rise to almost all somatic cell types but this characteristic requires precise control of their gene expression patterns. The necessity of keeping the entire genome "poised" to enter into any of a number of developmental possibilities requires a unique and highly plastic chromatin organisation based around specific patterns of histone modifications although this state of affairs is normally short lived during embryonic development. By deriving embryonic stem cells from the early embryo, we can preserve the highly specialised genome organisation and this has permitted several detailed investigations into the molecular basis of pluripotency.

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Year:  2012        PMID: 21808982     DOI: 10.1007/s12015-011-9300-4

Source DB:  PubMed          Journal:  Stem Cell Rev Rep        ISSN: 2629-3277            Impact factor:   5.739


  85 in total

1.  Recruitment of transcription complexes to the beta-globin gene locus in vivo and in vitro.

Authors:  Karen F Vieira; Padraic P Levings; Meredith A Hill; Valerie J Crusselle; Sung-Hae Lee Kang; James Douglas Engel; Jörg Bungert
Journal:  J Biol Chem       Date:  2004-09-22       Impact factor: 5.157

Review 2.  Barring gene expression after XIST: maintaining facultative heterochromatin on the inactive X.

Authors:  Brian P Chadwick; Huntington F Willard
Journal:  Semin Cell Dev Biol       Date:  2003-12       Impact factor: 7.727

Review 3.  Epigenetic reprogramming in mammals.

Authors:  Hugh D Morgan; Fátima Santos; Kelly Green; Wendy Dean; Wolf Reik
Journal:  Hum Mol Genet       Date:  2005-04-15       Impact factor: 6.150

4.  Core transcriptional regulatory circuitry in human embryonic stem cells.

Authors:  Laurie A Boyer; Tong Ihn Lee; Megan F Cole; Sarah E Johnstone; Stuart S Levine; Jacob P Zucker; Matthew G Guenther; Roshan M Kumar; Heather L Murray; Richard G Jenner; David K Gifford; Douglas A Melton; Rudolf Jaenisch; Richard A Young
Journal:  Cell       Date:  2005-09-23       Impact factor: 41.582

5.  30 nm chromatin fibre decompaction requires both H4-K16 acetylation and linker histone eviction.

Authors:  Philip J J Robinson; Woojin An; Andrew Routh; Fabrizio Martino; Lynda Chapman; Robert G Roeder; Daniela Rhodes
Journal:  J Mol Biol       Date:  2008-04-29       Impact factor: 5.469

6.  Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution.

Authors:  Nimet Maherali; Rupa Sridharan; Wei Xie; Jochen Utikal; Sarah Eminli; Katrin Arnold; Matthias Stadtfeld; Robin Yachechko; Jason Tchieu; Rudolf Jaenisch; Kathrin Plath; Konrad Hochedlinger
Journal:  Cell Stem Cell       Date:  2007-06-07       Impact factor: 24.633

7.  The conserved role of Krox-20 in directing Hox gene expression during vertebrate hindbrain segmentation.

Authors:  S Nonchev; M Maconochie; C Vesque; S Aparicio; L Ariza-McNaughton; M Manzanares; K Maruthainar; A Kuroiwa; S Brenner; P Charnay; R Krumlauf
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-03       Impact factor: 11.205

8.  Histone H3 lysine 4 methylation patterns in higher eukaryotic genes.

Authors:  Robert Schneider; Andrew J Bannister; Fiona A Myers; Alan W Thorne; Colyn Crane-Robinson; Tony Kouzarides
Journal:  Nat Cell Biol       Date:  2003-12-07       Impact factor: 28.824

9.  Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription.

Authors:  Séverine Chambeyron; Wendy A Bickmore
Journal:  Genes Dev       Date:  2004-05-15       Impact factor: 11.361

10.  CAF-1 is essential for heterochromatin organization in pluripotent embryonic cells.

Authors:  Martin Houlard; Soizik Berlivet; Aline V Probst; Jean-Pierre Quivy; Patrick Héry; Geneviève Almouzni; Matthieu Gérard
Journal:  PLoS Genet       Date:  2006-09-11       Impact factor: 5.917

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  13 in total

Review 1.  The roles and regulation of Polycomb complexes in neural development.

Authors:  Matthew Corley; Kristen L Kroll
Journal:  Cell Tissue Res       Date:  2014-11-01       Impact factor: 5.249

2.  Epigenome-wide association study (EWAS) of BMI, BMI change and waist circumference in African American adults identifies multiple replicated loci.

Authors:  Ellen W Demerath; Weihua Guan; Megan L Grove; Stella Aslibekyan; Michael Mendelson; Yi-Hui Zhou; Åsa K Hedman; Johanna K Sandling; Li-An Li; Marguerite R Irvin; Degui Zhi; Panos Deloukas; Liming Liang; Chunyu Liu; Jan Bressler; Tim D Spector; Kari North; Yun Li; Devin M Absher; Daniel Levy; Donna K Arnett; Myriam Fornage; James S Pankow; Eric Boerwinkle
Journal:  Hum Mol Genet       Date:  2015-05-01       Impact factor: 6.150

3.  Epigenetic switching by the metabolism-sensing factors in the generation of orexin neurons from mouse embryonic stem cells.

Authors:  Koji Hayakawa; Mitsuko Hirosawa; Yasuyuki Tabei; Daisuke Arai; Satoshi Tanaka; Noboru Murakami; Shintaro Yagi; Kunio Shiota
Journal:  J Biol Chem       Date:  2013-04-26       Impact factor: 5.157

4.  PKC inhibitors regulate stem cell self-renewal by regulating H3K27me3 and H3K9me3.

Authors:  Jialei Sun; Na He; Weiguo Wang; Yujian Dai; Chunhui Hou; Fuliang Du
Journal:  Am J Transl Res       Date:  2022-06-15       Impact factor: 3.940

Review 5.  Functional O-GlcNAc modifications: implications in molecular regulation and pathophysiology.

Authors:  Krithika Vaidyanathan; Sean Durning; Lance Wells
Journal:  Crit Rev Biochem Mol Biol       Date:  2014-02-14       Impact factor: 8.250

6.  Non-canonical activity of retinoic acid in epigenetic control of embryonic stem cell.

Authors:  Li-Na Wei
Journal:  Transcription       Date:  2013-06-14

7.  The genetics of obesity in transition.

Authors:  Ellen W Demerath
Journal:  Coll Antropol       Date:  2012-12

8.  The positive association of obesity variants with adulthood adiposity strengthens over an 80-year period: a gene-by-birth year interaction.

Authors:  Ellen W Demerath; Audrey C Choh; William Johnson; Joanne E Curran; Miryoung Lee; Claire Bellis; Thomas D Dyer; Stefan A Czerwinski; John Blangero; Bradford Towne
Journal:  Hum Hered       Date:  2013-09-27       Impact factor: 0.444

9.  MiR-125b orchestrates cell proliferation, differentiation and migration in neural stem/progenitor cells by targeting Nestin.

Authors:  Yi Cui; Zhifeng Xiao; Jin Han; Jie Sun; Wenyong Ding; Yannan Zhao; Bing Chen; Xiaoran Li; Jianwu Dai
Journal:  BMC Neurosci       Date:  2012-09-28       Impact factor: 3.288

10.  MeCP2 dependent heterochromatin reorganization during neural differentiation of a novel Mecp2-deficient embryonic stem cell reporter line.

Authors:  Bianca Bertulat; Maria Luigia De Bonis; Floriana Della Ragione; Anne Lehmkuhl; Manuela Milden; Christian Storm; K Laurence Jost; Simona Scala; Brian Hendrich; Maurizio D'Esposito; M Cristina Cardoso
Journal:  PLoS One       Date:  2012-10-24       Impact factor: 3.240

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