Literature DB >> 21792347

Developing a Fluorescence-based Approach to Screening for Macromolecule Crystallization Conditions.

Marc L Pusey1.   

Abstract

Current macromolecule crystallization screening methods rely on the random testing of crystallization conditions, in the hope that one or more will yield positive results, crystals. Most plate outcomes are either clear or precipitated solutions, which results are routinely discarded by the experimenter. However, many of these may in fact be close to crystallization conditions, which fact is obscured by the nature of the apparent outcome. We are developing a fluorescence-based approach to the determination of crystallization conditions, which approach can also be used to assess conditions that may be close to those that would give crystals. The method uses measurements of fluorescence anisotropy and intensity. The method was first tested using model proteins, with likely outcomes as determined by fluorescence measurements where the plate data showed either clear or precipitated solutions being subjected to optimization screening. The results showed a ~83% increase in the number of crystallization conditions. The method was then tried as the sole screening method with a number of test proteins. In every case at least one or more crystallization conditions were found, and it is estimated that ~53% of these would not have been found using a plate screen.

Entities:  

Year:  2011        PMID: 21792347      PMCID: PMC3142472          DOI: 10.1021/cg1013522

Source DB:  PubMed          Journal:  Cryst Growth Des        ISSN: 1528-7483            Impact factor:   4.076


  15 in total

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Authors:  Joseph D Ng; José A Gavira; Juan M García-Ruíz
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

Review 2.  Efficient protein crystallization.

Authors:  Lawrence J DeLucas; Terry L Bray; Lisa Nagy; Debbie McCombs; Nikolai Chernov; David Hamrick; Larry Cosenza; Alexander Belgovskiy; Brad Stoops; Arnon Chait
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

3.  Trace fluorescent labeling for high-throughput crystallography.

Authors:  Elizabeth Forsythe; Aniruddha Achari; Marc L Pusey
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-02-22

4.  Detergent effects on the light-harvesting chlorophyll A/B-protein complex crystallization revealed by fluorescence depolarization.

Authors:  M Furuichi; E Nishimoto; T Koga; A Takase; S Yamashita
Journal:  Biochem Biophys Res Commun       Date:  1997-04-17       Impact factor: 3.575

5.  Fluorescence polarization immunoassay of a high-molecular-weight antigen based on a long-lifetime Ru-ligand complex.

Authors:  E Terpetschnig; H Szmacinski; J R Lakowicz
Journal:  Anal Biochem       Date:  1995-05-01       Impact factor: 3.365

6.  DESIGN: a guide to protein crystallization experiments.

Authors:  J Sedzik
Journal:  Arch Biochem Biophys       Date:  1994-02-01       Impact factor: 4.013

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Authors:  C W Carter; C W Carter
Journal:  J Biol Chem       Date:  1979-12-10       Impact factor: 5.157

8.  Crystallization of phaseolin from Phaseolus vulgaris.

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Journal:  J Biol Chem       Date:  1983-02-25       Impact factor: 5.157

9.  Metal-ligand complexes as a new class of long-lived fluorophores for protein hydrodynamics.

Authors:  E Terpetschnig; H Szmacinski; H Malak; J R Lakowicz
Journal:  Biophys J       Date:  1995-01       Impact factor: 4.033

10.  Effect of amino acids and amino acid derivatives on crystallization of hemoglobin and ribonuclease A.

Authors:  Len Ito; Toyoaki Kobayashi; Kentaro Shiraki; Hiroshi Yamaguchi
Journal:  J Synchrotron Radiat       Date:  2008-04-18       Impact factor: 2.616

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  5 in total

1.  Microseed matrix screening for optimization in protein crystallization: what have we learned?

Authors:  Allan D'Arcy; Terese Bergfors; Sandra W Cowan-Jacob; May Marsh
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Review 2.  Introduction to protein crystallization.

Authors:  Alexander McPherson; Jose A Gavira
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2013-12-24       Impact factor: 1.056

3.  Interrogating Detergent Desolvation of Nanopore-Forming Proteins by Fluorescence Polarization Spectroscopy.

Authors:  Aaron J Wolfe; Yi-Ching Hsueh; Adam R Blanden; Mohammad M Mohammad; Bach Pham; Avinash K Thakur; Stewart N Loh; Min Chen; Liviu Movileanu
Journal:  Anal Chem       Date:  2017-07-10       Impact factor: 6.986

4.  A crystallization apparatus for temperature-controlled flow-cell dialysis with real-time visualization.

Authors:  Niels Junius; Esko Oksanen; Maxime Terrien; Christophe Berzin; Jean-Luc Ferrer; Monika Budayova-Spano
Journal:  J Appl Crystallogr       Date:  2016-04-22       Impact factor: 3.304

5.  Some practical guidelines for UV imaging in the protein crystallization laboratory.

Authors:  Sebastien Desbois; Shane A Seabrook; Janet Newman
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-01-26
  5 in total

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