Literature DB >> 21775127

Lipidic cubic phase technologies for membrane protein structural studies.

Vadim Cherezov1.   

Abstract

Lipidic cubic phase (LCP) is a membrane-mimetic matrix suitable for stabilization and crystallization of membrane proteins in lipidic environment. LCP technologies, however, have not been fully embraced by the membrane protein structural biology community, primarily because of the difficulties associated with handling viscous materials. Recent developments of pre-crystallization assays and improvements in crystal imaging, successes in obtaining high resolution structures of G protein-coupled receptors (GPCRs), and commercial availability of LCP tools and instruments are beginning to attract structural biologists to integrate LCP technologies in their research. This wider acceptance should translate to an increased number of otherwise difficult-to-crystallize membrane protein structures, shedding light on their functional mechanisms and on structural details of lipid-protein interactions.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21775127      PMCID: PMC3164297          DOI: 10.1016/j.sbi.2011.06.007

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  41 in total

1.  Structures of the CXCR4 chemokine GPCR with small-molecule and cyclic peptide antagonists.

Authors:  Beili Wu; Ellen Y T Chien; Clifford D Mol; Gustavo Fenalti; Wei Liu; Vsevolod Katritch; Ruben Abagyan; Alexei Brooun; Peter Wells; F Christopher Bi; Damon J Hamel; Peter Kuhn; Tracy M Handel; Vadim Cherezov; Raymond C Stevens
Journal:  Science       Date:  2010-10-07       Impact factor: 47.728

2.  High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptor.

Authors:  Vadim Cherezov; Daniel M Rosenbaum; Michael A Hanson; Søren G F Rasmussen; Foon Sun Thian; Tong Sun Kobilka; Hee-Jung Choi; Peter Kuhn; William I Weis; Brian K Kobilka; Raymond C Stevens
Journal:  Science       Date:  2007-10-25       Impact factor: 47.728

3.  LCP-FRAP Assay for Pre-Screening Membrane Proteins for in Meso Crystallization.

Authors:  Vadim Cherezov; Jeffrey Liu; Mark Griffith; Michael A Hanson; Raymond C Stevens
Journal:  Cryst Growth Des       Date:  2008       Impact factor: 4.076

4.  Conserved binding mode of human beta2 adrenergic receptor inverse agonists and antagonist revealed by X-ray crystallography.

Authors:  Daniel Wacker; Gustavo Fenalti; Monica A Brown; Vsevolod Katritch; Ruben Abagyan; Vadim Cherezov; Raymond C Stevens
Journal:  J Am Chem Soc       Date:  2010-08-25       Impact factor: 15.419

5.  Microfluidic Generation of Lipidic Mesophases for Membrane Protein Crystallization.

Authors:  Sarah L Perry; Griffin W Roberts; Joshua D Tice; Robert B Gennis; Paul J A Kenis
Journal:  Cryst Growth Des       Date:  2009-06-03       Impact factor: 4.076

6.  Microscale fluorescent thermal stability assay for membrane proteins.

Authors:  Alexander I Alexandrov; Mauro Mileni; Ellen Y T Chien; Michael A Hanson; Raymond C Stevens
Journal:  Structure       Date:  2008-03       Impact factor: 5.006

7.  A lipidic-sponge phase screen for membrane protein crystallization.

Authors:  Annemarie B Wöhri; Linda C Johansson; Pia Wadsten-Hindrichsen; Weixiao Y Wahlgren; Gerhard Fischer; Rob Horsefield; Gergely Katona; Maria Nyblom; Fredrik Oberg; Gillian Young; Richard J Cogdell; Niall J Fraser; Sven Engström; Richard Neutze
Journal:  Structure       Date:  2008-07       Impact factor: 5.006

8.  The 2.6 angstrom crystal structure of a human A2A adenosine receptor bound to an antagonist.

Authors:  Veli-Pekka Jaakola; Mark T Griffith; Michael A Hanson; Vadim Cherezov; Ellen Y T Chien; J Robert Lane; Adriaan P Ijzerman; Raymond C Stevens
Journal:  Science       Date:  2008-10-02       Impact factor: 47.728

9.  High resolution structure of the ba3 cytochrome c oxidase from Thermus thermophilus in a lipidic environment.

Authors:  Theresa Tiefenbrunn; Wei Liu; Ying Chen; Vsevolod Katritch; C David Stout; James A Fee; Vadim Cherezov
Journal:  PLoS One       Date:  2011-07-21       Impact factor: 3.240

10.  Effects of impurities on membrane-protein crystallization in different systems.

Authors:  Christopher A Kors; Ellen Wallace; Douglas R Davies; Liang Li; Philip D Laible; Peter Nollert
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-09-16
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  77 in total

Review 1.  New insights for drug design from the X-ray crystallographic structures of G-protein-coupled receptors.

Authors:  Kenneth A Jacobson; Stefano Costanzi
Journal:  Mol Pharmacol       Date:  2012-06-13       Impact factor: 4.436

2.  Phasing statistics for alpha helical membrane protein structures.

Authors:  Joanne L Parker; Simon Newstead
Journal:  Protein Sci       Date:  2013-09-17       Impact factor: 6.725

3.  Structure of RPE65 isomerase in a lipidic matrix reveals roles for phospholipids and iron in catalysis.

Authors:  Philip D Kiser; Erik R Farquhar; Wuxian Shi; Xuewu Sui; Mark R Chance; Krzysztof Palczewski
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-24       Impact factor: 11.205

4.  Advances in GPCR modeling evaluated by the GPCR Dock 2013 assessment: meeting new challenges.

Authors:  Irina Kufareva; Vsevolod Katritch; Raymond C Stevens; Ruben Abagyan
Journal:  Structure       Date:  2014-07-24       Impact factor: 5.006

5.  A Hendecad Motif Is Preferred for Heterochiral Coiled-Coil Formation.

Authors:  Dale F Kreitler; Zhihui Yao; Jay D Steinkruger; David E Mortenson; Lijun Huang; Ritesh Mittal; Benjamin R Travis; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2019-01-15       Impact factor: 15.419

6.  Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography.

Authors:  Uwe Weierstall; Daniel James; Chong Wang; Thomas A White; Dingjie Wang; Wei Liu; John C H Spence; R Bruce Doak; Garrett Nelson; Petra Fromme; Raimund Fromme; Ingo Grotjohann; Christopher Kupitz; Nadia A Zatsepin; Haiguang Liu; Shibom Basu; Daniel Wacker; Gye Won Han; Vsevolod Katritch; Sébastien Boutet; Marc Messerschmidt; Garth J Williams; Jason E Koglin; M Marvin Seibert; Markus Klinker; Cornelius Gati; Robert L Shoeman; Anton Barty; Henry N Chapman; Richard A Kirian; Kenneth R Beyerlein; Raymond C Stevens; Dianfan Li; Syed T A Shah; Nicole Howe; Martin Caffrey; Vadim Cherezov
Journal:  Nat Commun       Date:  2014       Impact factor: 14.919

Review 7.  Structural biology of G protein-coupled receptors: new opportunities from XFELs and cryoEM.

Authors:  Andrii Ishchenko; Cornelius Gati; Vadim Cherezov
Journal:  Curr Opin Struct Biol       Date:  2018-03-16       Impact factor: 6.809

8.  The role of a sodium ion binding site in the allosteric modulation of the A(2A) adenosine G protein-coupled receptor.

Authors:  Hugo Gutiérrez-de-Terán; Arnault Massink; David Rodríguez; Wei Liu; Gye Won Han; Jeremiah S Joseph; Ilia Katritch; Laura H Heitman; Lizi Xia; Adriaan P Ijzerman; Vadim Cherezov; Vsevolod Katritch; Raymond C Stevens
Journal:  Structure       Date:  2013-11-07       Impact factor: 5.006

Review 9.  Serial Femtosecond Crystallography of G Protein-Coupled Receptors.

Authors:  Benjamin Stauch; Vadim Cherezov
Journal:  Annu Rev Biophys       Date:  2018-03-15       Impact factor: 12.981

10.  MATE transport of the E. coli-derived genotoxin colibactin.

Authors:  Jarrod J Mousa; Ye Yang; Sarah Tomkovich; Ayaka Shima; Rachel C Newsome; Prabhanshu Tripathi; Eric Oswald; Steven D Bruner; Christian Jobin
Journal:  Nat Microbiol       Date:  2016-01-11       Impact factor: 17.745

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