Literature DB >> 29554543

Structural biology of G protein-coupled receptors: new opportunities from XFELs and cryoEM.

Andrii Ishchenko1, Cornelius Gati2, Vadim Cherezov3.   

Abstract

G protein-coupled receptors mediate cell signaling and regulate the majority of sensory and physiological processes in the human body. Recent breakthroughs in cryo-electron microscopy and X-ray free electron lasers have accelerated structural studies of difficult-to-crystallize receptors and their signaling complexes, and have opened up new opportunities in understanding conformational dynamics and visualizing the process of receptor activation with unprecedented spatial and temporal resolution. Here, we summarize major milestones and challenges associated with the application of these techniques and outline future directions in their development with a focus on membrane protein structural biology.
Copyright © 2018 Elsevier Ltd. All rights reserved.

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Year:  2018        PMID: 29554543      PMCID: PMC6139287          DOI: 10.1016/j.sbi.2018.03.009

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  51 in total

1.  Potential for biomolecular imaging with femtosecond X-ray pulses.

Authors:  R Neutze; R Wouts; D van der Spoel; E Weckert; J Hajdu
Journal:  Nature       Date:  2000-08-17       Impact factor: 49.962

2.  Grease matrix as a versatile carrier of proteins for serial crystallography.

Authors:  Michihiro Sugahara; Eiichi Mizohata; Eriko Nango; Mamoru Suzuki; Tomoyuki Tanaka; Tetsuya Masuda; Rie Tanaka; Tatsuro Shimamura; Yoshiki Tanaka; Chiyo Suno; Kentaro Ihara; Dongqing Pan; Keisuke Kakinouchi; Shigeru Sugiyama; Michio Murata; Tsuyoshi Inoue; Kensuke Tono; Changyong Song; Jaehyun Park; Takashi Kameshima; Takaki Hatsui; Yasumasa Joti; Makina Yabashi; So Iwata
Journal:  Nat Methods       Date:  2014-11-10       Impact factor: 28.547

Review 3.  Biased ligands at G-protein-coupled receptors: promise and progress.

Authors:  Jonathan D Violin; Aimee L Crombie; David G Soergel; Michael W Lark
Journal:  Trends Pharmacol Sci       Date:  2014-05-28       Impact factor: 14.819

4.  Breaking Cryo-EM Resolution Barriers to Facilitate Drug Discovery.

Authors:  Alan Merk; Alberto Bartesaghi; Soojay Banerjee; Veronica Falconieri; Prashant Rao; Mindy I Davis; Rajan Pragani; Matthew B Boxer; Lesley A Earl; Jacqueline L S Milne; Sriram Subramaniam
Journal:  Cell       Date:  2016-05-26       Impact factor: 41.582

Review 5.  Lipidic cubic phase technologies for membrane protein structural studies.

Authors:  Vadim Cherezov
Journal:  Curr Opin Struct Biol       Date:  2011-07-19       Impact factor: 6.809

6.  Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein.

Authors:  Jason Tenboer; Shibom Basu; Nadia Zatsepin; Kanupriya Pande; Despina Milathianaki; Matthias Frank; Mark Hunter; Sébastien Boutet; Garth J Williams; Jason E Koglin; Dominik Oberthuer; Michael Heymann; Christopher Kupitz; Chelsie Conrad; Jesse Coe; Shatabdi Roy-Chowdhury; Uwe Weierstall; Daniel James; Dingjie Wang; Thomas Grant; Anton Barty; Oleksandr Yefanov; Jennifer Scales; Cornelius Gati; Carolin Seuring; Vukica Srajer; Robert Henning; Peter Schwander; Raimund Fromme; Abbas Ourmazd; Keith Moffat; Jasper J Van Thor; John C H Spence; Petra Fromme; Henry N Chapman; Marius Schmidt
Journal:  Science       Date:  2014-12-05       Impact factor: 47.728

7.  Lipidic cubic phase injector facilitates membrane protein serial femtosecond crystallography.

Authors:  Uwe Weierstall; Daniel James; Chong Wang; Thomas A White; Dingjie Wang; Wei Liu; John C H Spence; R Bruce Doak; Garrett Nelson; Petra Fromme; Raimund Fromme; Ingo Grotjohann; Christopher Kupitz; Nadia A Zatsepin; Haiguang Liu; Shibom Basu; Daniel Wacker; Gye Won Han; Vsevolod Katritch; Sébastien Boutet; Marc Messerschmidt; Garth J Williams; Jason E Koglin; M Marvin Seibert; Markus Klinker; Cornelius Gati; Robert L Shoeman; Anton Barty; Henry N Chapman; Richard A Kirian; Kenneth R Beyerlein; Raymond C Stevens; Dianfan Li; Syed T A Shah; Nicole Howe; Martin Caffrey; Vadim Cherezov
Journal:  Nat Commun       Date:  2014       Impact factor: 14.919

8.  GPCR engineering yields high-resolution structural insights into beta2-adrenergic receptor function.

Authors:  Daniel M Rosenbaum; Vadim Cherezov; Michael A Hanson; Søren G F Rasmussen; Foon Sun Thian; Tong Sun Kobilka; Hee-Jung Choi; Xiao-Jie Yao; William I Weis; Raymond C Stevens; Brian K Kobilka
Journal:  Science       Date:  2007-10-25       Impact factor: 47.728

9.  Structure of the TRPV1 ion channel determined by electron cryo-microscopy.

Authors:  Maofu Liao; Erhu Cao; David Julius; Yifan Cheng
Journal:  Nature       Date:  2013-12-05       Impact factor: 49.962

10.  Structure of the full-length glucagon class B G-protein-coupled receptor.

Authors:  Haonan Zhang; Anna Qiao; Dehua Yang; Linlin Yang; Antao Dai; Chris de Graaf; Steffen Reedtz-Runge; Venkatasubramanian Dharmarajan; Hui Zhang; Gye Won Han; Thomas D Grant; Raymond G Sierra; Uwe Weierstall; Garrett Nelson; Wei Liu; Yanhong Wu; Limin Ma; Xiaoqing Cai; Guangyao Lin; Xiaoai Wu; Zhi Geng; Yuhui Dong; Gaojie Song; Patrick R Griffin; Jesper Lau; Vadim Cherezov; Huaiyu Yang; Michael A Hanson; Raymond C Stevens; Qiang Zhao; Hualiang Jiang; Ming-Wei Wang; Beili Wu
Journal:  Nature       Date:  2017-05-17       Impact factor: 49.962

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  8 in total

Review 1.  Autoantibodies as Endogenous Modulators of GPCR Signaling.

Authors:  Meredith A Skiba; Andrew C Kruse
Journal:  Trends Pharmacol Sci       Date:  2020-12-24       Impact factor: 14.819

2.  G protein-coupled receptors of class A harness the energy of membrane potential to increase their sensitivity and selectivity.

Authors:  Daria N Shalaeva; Dmitry A Cherepanov; Michael Y Galperin; Gert Vriend; Armen Y Mulkidjanian
Journal:  Biochim Biophys Acta Biomembr       Date:  2019-08-23       Impact factor: 3.747

Review 3.  Chemical tools for membrane protein structural biology.

Authors:  Qinghai Zhang; Vadim Cherezov
Journal:  Curr Opin Struct Biol       Date:  2019-07-05       Impact factor: 6.809

4.  MicroED structure of the human adenosine receptor determined from a single nanocrystal in LCP.

Authors:  Michael W Martynowycz; Anna Shiriaeva; Xuanrui Ge; Johan Hattne; Brent L Nannenga; Vadim Cherezov; Tamir Gonen
Journal:  Proc Natl Acad Sci U S A       Date:  2021-09-07       Impact factor: 11.205

Review 5.  Structural insights into melatonin receptors.

Authors:  Benjamin Stauch; Linda C Johansson; Vadim Cherezov
Journal:  FEBS J       Date:  2019-11-23       Impact factor: 5.542

Review 6.  Structural insights into ligand recognition and activation of angiotensin receptors.

Authors:  Haitao Zhang; Aleksandra Luginina; Alexey Mishin; Mithu Baidya; Arun K Shukla; Vadim Cherezov
Journal:  Trends Pharmacol Sci       Date:  2021-05-10       Impact factor: 14.819

Review 7.  Native Mass Spectrometry of Membrane Proteins.

Authors:  James E Keener; Guozhi Zhang; Michael T Marty
Journal:  Anal Chem       Date:  2020-10-28       Impact factor: 6.986

Review 8.  Cell-Free Co-Translational Approaches for Producing Mammalian Receptors: Expanding the Cell-Free Expression Toolbox Using Nanolipoproteins.

Authors:  Megan L Shelby; Wei He; Amanda T Dang; Tonya L Kuhl; Matthew A Coleman
Journal:  Front Pharmacol       Date:  2019-07-03       Impact factor: 5.810

  8 in total

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