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Literature DB >> 21612267

Landscape of next-generation sequencing technologies.

Thomas P Niedringhaus¹, Denitsa Milanova, Matthew B Kerby, Michael P Snyder, Annelise E Barron.

Abstract

Entities: Chemical Disease Gene Species

Mesh：

Year: 2011 PMID： 21612267 PMCID： PMC3437308 DOI： 10.1021/ac2010857

Source DB: PubMed Journal: Anal Chem ISSN： 0003-2700 Impact factor: 6.986

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102 in total

Review 1. A review of DNA sequencing techniques.

Authors: Lilian T C França; Emanuel Carrilho; Tarso B L Kist
Journal: Q Rev Biophys Date: 2002-05 Impact factor: 5.318

2. Single-molecule denaturation mapping of DNA in nanofluidic channels.

Authors: Walter Reisner; Niels B Larsen; Asli Silahtaroglu; Anders Kristensen; Niels Tommerup; Jonas O Tegenfeldt; Henrik Flyvbjerg
Journal: Proc Natl Acad Sci U S A Date: 2010-07-07 Impact factor: 11.205

3. Detecting single stranded DNA with a solid state nanopore.

Authors: Daniel Fologea; Marc Gershow; Bradley Ledden; David S McNabb; Jene A Golovchenko; Jiali Li
Journal: Nano Lett Date: 2005-10 Impact factor: 11.189

4. DNA sequence determination by hybridization: a strategy for efficient large-scale sequencing.

Authors: R Drmanac; S Drmanac; Z Strezoska; T Paunesku; I Labat; M Zeremski; J Snoddy; W K Funkhouser; B Koop; L Hood
Journal: Science Date: 1993-06-11 Impact factor: 47.728

5. Nucleobase recognition in ssDNA at the central constriction of the alpha-hemolysin pore.

Authors: David Stoddart; Andrew J Heron; Jochen Klingelhoefer; Ellina Mikhailova; Giovanni Maglia; Hagan Bayley
Journal: Nano Lett Date: 2010-09-08 Impact factor: 11.189

6. Personalized medicine and genomics: challenges and opportunities in assessing effectiveness, cost-effectiveness, and future research priorities.

Authors: Rena Conti; David L Veenstra; Katrina Armstrong; Lawrence J Lesko; Scott D Grosse
Journal: Med Decis Making Date: 2010-01-04 Impact factor: 2.583

7. Read length and repeat resolution: exploring prokaryote genomes using next-generation sequencing technologies.

Authors: Matt J Cahill; Claudio U Köser; Nicholas E Ross; John A C Archer
Journal: PLoS One Date: 2010-07-12 Impact factor: 3.240

Review 8. Genomic and personalized medicine: foundations and applications.

Authors: Geoffrey S Ginsburg; Huntington F Willard
Journal: Transl Res Date: 2009-10-01 Impact factor: 7.012

9. Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans.

Authors: Brian J Haas; Sophien Kamoun; Michael C Zody; Rays H Y Jiang; Robert E Handsaker; Liliana M Cano; Manfred Grabherr; Chinnappa D Kodira; Sylvain Raffaele; Trudy Torto-Alalibo; Tolga O Bozkurt; Audrey M V Ah-Fong; Lucia Alvarado; Vicky L Anderson; Miles R Armstrong; Anna Avrova; Laura Baxter; Jim Beynon; Petra C Boevink; Stephanie R Bollmann; Jorunn I B Bos; Vincent Bulone; Guohong Cai; Cahid Cakir; James C Carrington; Megan Chawner; Lucio Conti; Stefano Costanzo; Richard Ewan; Noah Fahlgren; Michael A Fischbach; Johanna Fugelstad; Eleanor M Gilroy; Sante Gnerre; Pamela J Green; Laura J Grenville-Briggs; John Griffith; Niklaus J Grünwald; Karolyn Horn; Neil R Horner; Chia-Hui Hu; Edgar Huitema; Dong-Hoon Jeong; Alexandra M E Jones; Jonathan D G Jones; Richard W Jones; Elinor K Karlsson; Sridhara G Kunjeti; Kurt Lamour; Zhenyu Liu; Lijun Ma; Daniel Maclean; Marcus C Chibucos; Hayes McDonald; Jessica McWalters; Harold J G Meijer; William Morgan; Paul F Morris; Carol A Munro; Keith O'Neill; Manuel Ospina-Giraldo; Andrés Pinzón; Leighton Pritchard; Bernard Ramsahoye; Qinghu Ren; Silvia Restrepo; Sourav Roy; Ari Sadanandom; Alon Savidor; Sebastian Schornack; David C Schwartz; Ulrike D Schumann; Ben Schwessinger; Lauren Seyer; Ted Sharpe; Cristina Silvar; Jing Song; David J Studholme; Sean Sykes; Marco Thines; Peter J I van de Vondervoort; Vipaporn Phuntumart; Stephan Wawra; Rob Weide; Joe Win; Carolyn Young; Shiguo Zhou; William Fry; Blake C Meyers; Pieter van West; Jean Ristaino; Francine Govers; Paul R J Birch; Stephen C Whisson; Howard S Judelson; Chad Nusbaum
Journal: Nature Date: 2009-09-09 Impact factor: 49.962

10. Multiplex padlock targeted sequencing reveals human hypermutable CpG variations.

Authors: Jin Billy Li; Yuan Gao; John Aach; Kun Zhang; Gregory V Kryukov; Bin Xie; Annika Ahlford; Jung-Ki Yoon; Abraham M Rosenbaum; Alexander Wait Zaranek; Emily LeProust; Shamil R Sunyaev; George M Church
Journal: Genome Res Date: 2009-06-12 Impact factor: 9.043

85 in total

1. A genetic linkage map of Brassica carinata constructed with a doubled haploid population.

Authors: Shaomin Guo; Jun Zou; Ruiyan Li; Yan Long; Sheng Chen; Jinling Meng
Journal: Theor Appl Genet Date: 2012-06-06 Impact factor: 5.699

2. Resolution limit for DNA barcodes in the Odijk regime.

Authors: Yanwei Wang; Wes F Reinhart; Douglas R Tree; Kevin D Dorfman
Journal: Biomicrofluidics Date: 2012-01-03 Impact factor: 2.800

3. Scalable methods for analyzing and visualizing phylogenetic placement of metagenomic samples.

Authors: Lucas Czech; Alexandros Stamatakis
Journal: PLoS One Date: 2019-05-28 Impact factor: 3.240

Review 4. RNA-Seq technology and its application in fish transcriptomics.

Authors: Xi Qian; Yi Ba; Qianfeng Zhuang; Guofang Zhong
Journal: OMICS Date: 2013-12-31

5. Fragmentation of genomic DNA using microwave irradiation.

Authors: Yu Yang; Jun Hang
Journal: J Biomol Tech Date: 2013-07

Review 6. Application of the conventional and novel methods in testing EGFR variants for NSCLC patients in the last 10 years through different regions: a systematic review.

Authors: Jasmina Obradovic; Jovana Todosijevic; Vladimir Jurisic
Journal: Mol Biol Rep Date: 2021-05-10 Impact factor: 2.316

7. A Benchmark Study on Error Assessment and Quality Control of CCS Reads Derived from the PacBio RS.

Authors: Xiaoli Jiao; Xin Zheng; Liang Ma; Geetha Kutty; Emile Gogineni; Qiang Sun; Brad T Sherman; Xiaojun Hu; Kristine Jones; Castle Raley; Bao Tran; David J Munroe; Robert Stephens; Dun Liang; Tomozumi Imamichi; Joseph A Kovacs; Richard A Lempicki; Da Wei Huang
Journal: J Data Mining Genomics Proteomics Date: 2013-07-31