Literature DB >> 22669300

A genetic linkage map of Brassica carinata constructed with a doubled haploid population.

Shaomin Guo1, Jun Zou, Ruiyan Li, Yan Long, Sheng Chen, Jinling Meng.   

Abstract

Brassica carinata is an important oilseed crop with unique favourable traits that are desirable for other Brassica crops. However, given the limited research into genetic resources in B. carinata, knowledge of the genetic structure of this species is relatively poor. Nine homozygous, genetically distinct accessions of B. carinata were obtained via microspore culture, from which two divergent doubled haploid (DH) lines were used to develop a DH mapping population that consisted of 183 lines. The mapping population showed segregation of multiple traits of interest. A genetic map was constructed with PCR-based markers, and a total of 212 loci, which covered 1,703 cM, were assigned to eight linkage groups in the B genome and nine linkage groups in the C genome, which allowed comparison with genetic maps of other important Brassica species that contain the B/C genome(s). Loci for two Mendelian-inherited traits related to pigmentation (petal and anther tip colour) and one quantitative trait (seed coat colour) were identified using the linkage map. The significance of the mapping population in the context of genetic improvement of Brassica crops is discussed.

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Year:  2012        PMID: 22669300     DOI: 10.1007/s00122-012-1898-3

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  41 in total

1.  Eliminating expression of erucic acid-encoding loci allows the identification of "hidden" QTL contributing to oil quality fractions and oil content in Brassica juncea (Indian mustard).

Authors:  Arun Jagannath; Yashpal Singh Sodhi; Vibha Gupta; Arundhati Mukhopadhyay; Neelakantan Arumugam; Indira Singh; Soma Rohatgi; Pradeep Kumar Burma; Akshay Kumar Pradhan; Deepak Pental
Journal:  Theor Appl Genet       Date:  2010-12-29       Impact factor: 5.699

2.  Unraveling the complex trait of crop yield with quantitative trait loci mapping in Brassica napus.

Authors:  Jiaqin Shi; Ruiyuan Li; Dan Qiu; Congcong Jiang; Yan Long; Colin Morgan; Ian Bancroft; Jianyi Zhao; Jinling Meng
Journal:  Genetics       Date:  2009-05-04       Impact factor: 4.562

3.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

4.  Mapping of quantitative trait loci and development of allele-specific markers for seed weight in Brassica napus.

Authors:  Chuchuan Fan; Guangqin Cai; Jie Qin; Qingyuan Li; Minggui Yang; Jianzhong Wu; Tingdong Fu; Kede Liu; Yongming Zhou
Journal:  Theor Appl Genet       Date:  2010-06-24       Impact factor: 5.699

5.  Molecular markers for seed colour in Brassica juncea.

Authors:  T Mahmood; M H Rahman; G R Stringam; J P Raney; A G Good
Journal:  Genome       Date:  2005-08       Impact factor: 2.166

6.  Mapping of yield influencing QTL in Brassica juncea: implications for breeding of a major oilseed crop of dryland areas.

Authors:  N Ramchiary; K L Padmaja; S Sharma; V Gupta; Y S Sodhi; A Mukhopadhyay; N Arumugam; D Pental; A K Pradhan
Journal:  Theor Appl Genet       Date:  2007-07-24       Impact factor: 5.699

7.  Development and genetic mapping of microsatellite markers from genome survey sequences in Brassica napus.

Authors:  Xiaomao Cheng; Jinsong Xu; Shu Xia; Jianxun Gu; Yuan Yang; Jie Fu; Xiaoju Qian; Shunchang Zhang; Jiangsheng Wu; Kede Liu
Journal:  Theor Appl Genet       Date:  2009-02-04       Impact factor: 5.699

8.  The genome of the mesopolyploid crop species Brassica rapa.

Authors:  Xiaowu Wang; Hanzhong Wang; Jun Wang; Rifei Sun; Jian Wu; Shengyi Liu; Yinqi Bai; Jeong-Hwan Mun; Ian Bancroft; Feng Cheng; Sanwen Huang; Xixiang Li; Wei Hua; Junyi Wang; Xiyin Wang; Michael Freeling; J Chris Pires; Andrew H Paterson; Boulos Chalhoub; Bo Wang; Alice Hayward; Andrew G Sharpe; Beom-Seok Park; Bernd Weisshaar; Binghang Liu; Bo Li; Bo Liu; Chaobo Tong; Chi Song; Christopher Duran; Chunfang Peng; Chunyu Geng; Chushin Koh; Chuyu Lin; David Edwards; Desheng Mu; Di Shen; Eleni Soumpourou; Fei Li; Fiona Fraser; Gavin Conant; Gilles Lassalle; Graham J King; Guusje Bonnema; Haibao Tang; Haiping Wang; Harry Belcram; Heling Zhou; Hideki Hirakawa; Hiroshi Abe; Hui Guo; Hui Wang; Huizhe Jin; Isobel A P Parkin; Jacqueline Batley; Jeong-Sun Kim; Jérémy Just; Jianwen Li; Jiaohui Xu; Jie Deng; Jin A Kim; Jingping Li; Jingyin Yu; Jinling Meng; Jinpeng Wang; Jiumeng Min; Julie Poulain; Jun Wang; Katsunori Hatakeyama; Kui Wu; Li Wang; Lu Fang; Martin Trick; Matthew G Links; Meixia Zhao; Mina Jin; Nirala Ramchiary; Nizar Drou; Paul J Berkman; Qingle Cai; Quanfei Huang; Ruiqiang Li; Satoshi Tabata; Shifeng Cheng; Shu Zhang; Shujiang Zhang; Shunmou Huang; Shusei Sato; Silong Sun; Soo-Jin Kwon; Su-Ryun Choi; Tae-Ho Lee; Wei Fan; Xiang Zhao; Xu Tan; Xun Xu; Yan Wang; Yang Qiu; Ye Yin; Yingrui Li; Yongchen Du; Yongcui Liao; Yongpyo Lim; Yoshihiro Narusaka; Yupeng Wang; Zhenyi Wang; Zhenyu Li; Zhiwen Wang; Zhiyong Xiong; Zhonghua Zhang
Journal:  Nat Genet       Date:  2011-08-28       Impact factor: 38.330

9.  Integration of linkage maps for the Amphidiploid Brassica napus and comparative mapping with Arabidopsis and Brassica rapa.

Authors:  Jun Wang; Derek J Lydiate; Isobel A P Parkin; Cyril Falentin; Régine Delourme; Pierre W C Carion; Graham J King
Journal:  BMC Genomics       Date:  2011-02-09       Impact factor: 3.969

10.  Diversity array technology markers: genetic diversity analyses and linkage map construction in rapeseed (Brassica napus L.).

Authors:  Harsh Raman; Rosy Raman; Matthew N Nelson; M N Aslam; Ravikesavan Rajasekaran; Neil Wratten; Wallace A Cowling; A Kilian; Andrew G Sharpe; Joerg Schondelmaier
Journal:  DNA Res       Date:  2011-12-22       Impact factor: 4.458

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  14 in total

1.  The first genetic map of a synthesized allohexaploid Brassica with A, B and C genomes based on simple sequence repeat markers.

Authors:  S Yang; S Chen; X X Geng; G Yan; Z Y Li; J L Meng; W A Cowling; W J Zhou
Journal:  Theor Appl Genet       Date:  2016-01-18       Impact factor: 5.699

2.  Constructing a dense genetic linkage map and mapping QTL for the traits of flower development in Brassica carinata.

Authors:  Jun Zou; Harsh Raman; Shaomin Guo; Dandan Hu; Zili Wei; Ziliang Luo; Yan Long; Wenxia Shi; Zhong Fu; Dezhi Du; Jinling Meng
Journal:  Theor Appl Genet       Date:  2014-05-14       Impact factor: 5.699

3.  A high-density SNP map for accurate mapping of seed fibre QTL in Brassica napus L.

Authors:  Liezhao Liu; Cunmin Qu; Benjamin Wittkop; Bin Yi; Yang Xiao; Yajun He; Rod J Snowdon; Jiana Li
Journal:  PLoS One       Date:  2013-12-26       Impact factor: 3.240

Review 4.  Comparative genomics of Brassicaceae crops.

Authors:  Ashutosh Sharma; Xiaonan Li; Yong Pyo Lim
Journal:  Breed Sci       Date:  2014-05       Impact factor: 2.086

5.  Co-linearity and divergence of the A subgenome of Brassica juncea compared with other Brassica species carrying different A subgenomes.

Authors:  Jun Zou; Dandan Hu; Peifa Liu; Harsh Raman; Zhongsong Liu; Xianjun Liu; Isobel A P Parkin; Boulos Chalhoub; Jinling Meng
Journal:  BMC Genomics       Date:  2016-01-05       Impact factor: 3.969

6.  Molecular Diversity Analysis and Genetic Mapping of Pod Shatter Resistance Loci in Brassica carinata L.

Authors:  Rosy Raman; Yu Qiu; Neil Coombes; Jie Song; Andrzej Kilian; Harsh Raman
Journal:  Front Plant Sci       Date:  2017-11-30       Impact factor: 5.753

7.  Development of Brassica oleracea-nigra monosomic alien addition lines: genotypic, cytological and morphological analyses.

Authors:  Chen Tan; Cheng Cui; Yi Xiang; Xianhong Ge; Zaiyun Li
Journal:  Theor Appl Genet       Date:  2017-09-07       Impact factor: 5.699

8.  Construction of a genetic linkage map and QTL analysis of erucic acid content and glucosinolate components in yellow mustard (Sinapis alba L.).

Authors:  Farzad Javidfar; Bifang Cheng
Journal:  BMC Plant Biol       Date:  2013-09-26       Impact factor: 4.215

9.  Genetics and Molecular Mapping of Black Rot Resistance Locus Xca1bc on Chromosome B-7 in Ethiopian Mustard (Brassica carinata A. Braun).

Authors:  Brij Bihari Sharma; Pritam Kalia; Devendra Kumar Yadava; Dinesh Singh; Tilak Raj Sharma
Journal:  PLoS One       Date:  2016-03-29       Impact factor: 3.240

10.  Introgression of Black Rot Resistance from Brassica carinata to Cauliflower (Brassica oleracea botrytis Group) through Embryo Rescue.

Authors:  Brij B Sharma; Pritam Kalia; Dinesh Singh; Tilak R Sharma
Journal:  Front Plant Sci       Date:  2017-07-18       Impact factor: 5.753

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