| Literature DB >> 21588616 |
Ching Kheng Quah1, Madhukar Hemamalini, Hoong-Kun Fun.
Abstract
In the title compound, 2C(5)H(6)BrN(2) (+)·C(4)H(2)O(4) (2-)·2H(2)O, the complete fumarate dianion is generated by crystallographic inversion symmetry. The cation is approximately planar, with a maximum deviation of 0.036 (1) Å. In the anion, the carboxyl-ate group is twisted slightly away from the attached plane; the dihedral angle between carboxyl-ate and (E)-but-2-ene planes is 6.11 (14)°. In the crystal, the carboxyl-ate O atoms form bifurcated (N-H⋯O and C-H⋯O) and N-H⋯O hydrogen bonds with the cations. The crystal packing is stabilized by R(2) (2)(8) ring motifs which are generated by pairs of N-H⋯O hydrogen bonds. The crystal structure is further consolidated by water mol-ecules via O(water)-H⋯O and N-H⋯O(water) hydrogen bonds. The components are linked by these inter-actions into three-dimensional network.Entities:
Year: 2010 PMID: 21588616 PMCID: PMC3007988 DOI: 10.1107/S1600536810030989
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 2C5H6BrN2+·C4H2O42−·2H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 5779 reflections |
| θ = 2.6–34.6° | |
| µ = 4.59 mm−1 | |
| β = 108.336 (1)° | Block, colourless |
| 0.39 × 0.15 × 0.12 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 3942 independent reflections |
| Radiation source: fine-focus sealed tube | 3252 reflections with |
| graphite | |
| φ and ω scans | θmax = 35.2°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 15040 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3942 reflections | (Δ/σ)max = 0.001 |
| 138 parameters | Δρmax = 0.54 e Å−3 |
| 0 restraints | Δρmin = −0.39 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | 0.741696 (15) | 1.042853 (7) | 0.08809 (2) | 0.01677 (4) | |
| N1 | 0.78272 (13) | 0.79718 (7) | 0.17705 (16) | 0.01325 (19) | |
| H1N1 | 0.712 (2) | 0.7551 (11) | 0.133 (3) | 0.022 (4)* | |
| N2 | 0.99471 (14) | 0.70859 (7) | 0.34946 (18) | 0.0152 (2) | |
| H2N2 | 1.091 (3) | 0.7028 (12) | 0.426 (3) | 0.031 (5)* | |
| H1N2 | 0.926 (2) | 0.6673 (12) | 0.296 (3) | 0.036 (5)* | |
| C1 | 0.72188 (15) | 0.87250 (8) | 0.11482 (19) | 0.0142 (2) | |
| H1A | 0.6112 | 0.8790 | 0.0301 | 0.017* | |
| C2 | 0.82285 (16) | 0.93842 (8) | 0.1764 (2) | 0.0139 (2) | |
| C3 | 0.99045 (15) | 0.92827 (8) | 0.3065 (2) | 0.0148 (2) | |
| H3A | 1.0606 | 0.9729 | 0.3486 | 0.018* | |
| C4 | 1.04836 (15) | 0.85246 (8) | 0.36957 (19) | 0.0144 (2) | |
| H4A | 1.1575 | 0.8455 | 0.4585 | 0.017* | |
| C5 | 0.94285 (15) | 0.78397 (8) | 0.30010 (18) | 0.0127 (2) | |
| O1W | 0.34331 (12) | 0.71054 (7) | 0.61811 (17) | 0.0206 (2) | |
| H2W1 | 0.392 (3) | 0.6972 (13) | 0.729 (3) | 0.038 (6)* | |
| H1W1 | 0.396 (3) | 0.7487 (15) | 0.594 (4) | 0.043 (6)* | |
| O1 | 0.55652 (11) | 0.67725 (5) | 0.02333 (15) | 0.01630 (18) | |
| O2 | 0.75988 (11) | 0.58655 (6) | 0.15601 (16) | 0.01766 (18) | |
| C6 | 0.48381 (16) | 0.53893 (7) | −0.0202 (2) | 0.0139 (2) | |
| H6AA | 0.3763 | 0.5537 | −0.1026 | 0.017* | |
| C7 | 0.61164 (15) | 0.60438 (7) | 0.06033 (19) | 0.0127 (2) |
| Br1 | 0.01516 (6) | 0.01024 (6) | 0.02259 (7) | 0.00028 (4) | 0.00262 (4) | 0.00195 (5) |
| N1 | 0.0112 (4) | 0.0107 (5) | 0.0165 (5) | −0.0015 (4) | 0.0023 (4) | −0.0004 (4) |
| N2 | 0.0124 (5) | 0.0108 (5) | 0.0201 (5) | −0.0002 (4) | 0.0017 (4) | 0.0006 (4) |
| C1 | 0.0128 (5) | 0.0124 (5) | 0.0161 (5) | 0.0000 (4) | 0.0027 (4) | 0.0010 (4) |
| C2 | 0.0137 (5) | 0.0103 (5) | 0.0170 (5) | 0.0005 (4) | 0.0040 (4) | 0.0008 (4) |
| C3 | 0.0129 (5) | 0.0123 (5) | 0.0182 (6) | −0.0025 (4) | 0.0035 (4) | −0.0017 (4) |
| C4 | 0.0117 (5) | 0.0129 (6) | 0.0162 (5) | −0.0016 (4) | 0.0011 (4) | −0.0019 (4) |
| C5 | 0.0111 (5) | 0.0128 (5) | 0.0139 (5) | −0.0003 (4) | 0.0036 (4) | −0.0005 (4) |
| O1W | 0.0163 (5) | 0.0189 (5) | 0.0221 (5) | −0.0039 (4) | −0.0003 (4) | 0.0050 (4) |
| O1 | 0.0134 (4) | 0.0097 (4) | 0.0228 (5) | 0.0004 (3) | 0.0014 (3) | −0.0001 (3) |
| O2 | 0.0120 (4) | 0.0126 (4) | 0.0245 (5) | 0.0001 (3) | 0.0002 (3) | −0.0001 (4) |
| C6 | 0.0112 (5) | 0.0111 (5) | 0.0176 (5) | −0.0005 (4) | 0.0016 (4) | −0.0011 (4) |
| C7 | 0.0130 (5) | 0.0105 (5) | 0.0138 (5) | −0.0010 (4) | 0.0030 (4) | −0.0001 (4) |
| Br1—C2 | 1.8832 (13) | C3—H3A | 0.9300 |
| N1—C5 | 1.3556 (15) | C4—C5 | 1.4223 (17) |
| N1—C1 | 1.3616 (16) | C4—H4A | 0.9300 |
| N1—H1N1 | 0.899 (18) | O1W—H2W1 | 0.77 (2) |
| N2—C5 | 1.3278 (16) | O1W—H1W1 | 0.81 (2) |
| N2—H2N2 | 0.81 (2) | O1—C7 | 1.2863 (15) |
| N2—H1N2 | 0.89 (2) | O2—C7 | 1.2416 (14) |
| C1—C2 | 1.3620 (17) | C6—C6i | 1.326 (2) |
| C1—H1A | 0.9300 | C6—C7 | 1.4990 (17) |
| C2—C3 | 1.4130 (17) | C6—H6AA | 0.9300 |
| C3—C4 | 1.3635 (18) | ||
| C5—N1—C1 | 122.64 (11) | C2—C3—H3A | 120.3 |
| C5—N1—H1N1 | 119.8 (11) | C3—C4—C5 | 120.37 (11) |
| C1—N1—H1N1 | 117.5 (12) | C3—C4—H4A | 119.8 |
| C5—N2—H2N2 | 116.7 (14) | C5—C4—H4A | 119.8 |
| C5—N2—H1N2 | 119.8 (13) | N2—C5—N1 | 119.22 (11) |
| H2N2—N2—H1N2 | 123.4 (19) | N2—C5—C4 | 122.97 (11) |
| N1—C1—C2 | 120.10 (11) | N1—C5—C4 | 117.81 (11) |
| N1—C1—H1A | 119.9 | H2W1—O1W—H1W1 | 105 (2) |
| C2—C1—H1A | 120.0 | C6i—C6—C7 | 123.34 (14) |
| C1—C2—C3 | 119.67 (12) | C6i—C6—H6AA | 118.3 |
| C1—C2—Br1 | 120.62 (9) | C7—C6—H6AA | 118.3 |
| C3—C2—Br1 | 119.71 (9) | O2—C7—O1 | 124.24 (11) |
| C4—C3—C2 | 119.37 (11) | O2—C7—C6 | 120.03 (11) |
| C4—C3—H3A | 120.3 | O1—C7—C6 | 115.72 (11) |
| C5—N1—C1—C2 | −0.12 (18) | C1—N1—C5—N2 | −178.04 (12) |
| N1—C1—C2—C3 | −0.51 (19) | C1—N1—C5—C4 | 1.59 (17) |
| N1—C1—C2—Br1 | 178.98 (9) | C3—C4—C5—N2 | 177.11 (13) |
| C1—C2—C3—C4 | −0.42 (19) | C3—C4—C5—N1 | −2.50 (18) |
| Br1—C2—C3—C4 | −179.92 (10) | C6i—C6—C7—O2 | 6.0 (2) |
| C2—C3—C4—C5 | 1.93 (19) | C6i—C6—C7—O1 | −173.89 (16) |
| H··· | ||||
| N1—H1N1···O1 | 0.902 (18) | 1.815 (18) | 2.7136 (14) | 174.1 (19) |
| N2—H2N2···O1Wii | 0.82 (2) | 2.11 (2) | 2.9143 (16) | 169.7 (19) |
| N2—H1N2···O2 | 0.893 (19) | 1.946 (19) | 2.8348 (15) | 173.2 (19) |
| O1W—H2W1···O1iii | 0.77 (2) | 2.07 (2) | 2.8213 (15) | 169 (2) |
| O1W—H1W1···O1iv | 0.82 (3) | 1.99 (3) | 2.7865 (14) | 167 (3) |
| C3—H3A···O2v | 0.93 | 2.41 | 3.3089 (17) | 162. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.902 (18) | 1.815 (18) | 2.7136 (14) | 174.1 (19) |
| N2—H2 | 0.82 (2) | 2.11 (2) | 2.9143 (16) | 169.7 (19) |
| N2—H1 | 0.893 (19) | 1.946 (19) | 2.8348 (15) | 173.2 (19) |
| O1 | 0.77 (2) | 2.07 (2) | 2.8213 (15) | 169 (2) |
| O1 | 0.82 (3) | 1.99 (3) | 2.7865 (14) | 167 (3) |
| C3—H3 | 0.93 | 2.41 | 3.3089 (17) | 162 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .