Literature DB >> 21587785

(E)-4-Hy-droxy-2-[(2-hy-droxy-phen-yl)iminiometh-yl]phenolate.

Naser Eltaher Eltayeb, Siang Guan Teoh, Hoong-Kun Fun, Suchada Chantrapromma.   

Abstract

The title compound, C(13)H(11)NO(3), crystallizes in a zwitterionic form and has a trans configuration about the C=N bond. The mol-ecule is almost planar, the dihedral angle between the two benzene rings being 4.32 (8)°. The two hy-droxy substit-uents are coplanar with each of their attached n class="Chemical">benzene rings [r.m.s. deviations of 0.0053 (2) and 0.0052 (2) Å]. An intra-molecular N-H⋯O hydrogen bond formed between the iminium N and the phenolate O atom generates an S(6) ring motif. In the crystal, the mol-ecules are linked through O-H⋯O hydrogen bonds into chains along [110]. Two neighbouring chains are further connected through O-H⋯O hydrogen bonds in an anti-parallel manner. π-π inter-actions are also observed, with centroid-centroid distances of 3.7115 (19) and 3.743 (2) Å.

Entities:  

Year:  2010        PMID: 21587785      PMCID: PMC3006709          DOI: 10.1107/S1600536810020295

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Schiff bases and their applications, see: Dao et al. (2000 ▶); Kagkelari et al. (2009 ▶); Karthikeyan et al. (2006 ▶); Sriram et al. (2006 ▶). For related structures, see: Eltayeb et al. (2009 ▶, 2010a ▶,b ▶); Tan & Liu (2009 ▶). For the stability of the temperature controller used in the data collection, see Cosier & Glazer, (1986 ▶). For bond-length data, see: Allen et al. (1987 ▶). For n class="Chemical">hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C13H11NO3 M = 229.23 Monoclinic, a = 11.048 (5) Å b = 8.187 (3) Å c = 22.858 (10) Å β = 102.242 (13)° V = 2020.5 (15) Å3 Z = 8 Mo Kα radiation μ = 0.11 mm−1 T = 100 K 0.35 × 0.12 × 0.04 mm

Data collection

Bruker APEXII DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.963, T max = 0.996 15107 measured reflections 2967 independent reflections 2122 reflections with I > 2σ(I) R int = 0.087

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.173 S = 1.06 2967 reflections 198 parameters All H-atom parameters refined Δρmax = 0.48 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810020295/rz2453sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810020295/rz2453Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H11NO3F(000) = 960
Mr = 229.23Dx = 1.507 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 2967 reflections
a = 11.048 (5) Åθ = 1.8–30.1°
b = 8.187 (3) ŵ = 0.11 mm1
c = 22.858 (10) ÅT = 100 K
β = 102.242 (13)°Plate, red
V = 2020.5 (15) Å30.35 × 0.12 × 0.04 mm
Z = 8
Bruker APEXII DUO CCD area-detector diffractometer2967 independent reflections
Radiation source: sealed tube2122 reflections with I > 2σ(I)
graphiteRint = 0.087
φ and ω scansθmax = 30.1°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −15→15
Tmin = 0.963, Tmax = 0.996k = −11→11
15107 measured reflectionsl = −32→32
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.173All H-atom parameters refined
S = 1.06w = 1/[σ2(Fo2) + (0.1024P)2 + 0.2914P] where P = (Fo2 + 2Fc2)/3
2967 reflections(Δ/σ)max = 0.001
198 parametersΔρmax = 0.48 e Å3
0 restraintsΔρmin = −0.28 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.33647 (12)0.68246 (15)0.56400 (5)0.0181 (3)
H1O10.339 (3)0.792 (4)0.5686 (14)0.049 (8)*
O20.19184 (11)0.49929 (14)0.43502 (5)0.0172 (3)
O3−0.15299 (12)0.01393 (15)0.36222 (6)0.0195 (3)
H1O3−0.212 (3)0.001 (3)0.3867 (14)0.045 (8)*
N10.18126 (13)0.43402 (17)0.54431 (6)0.0136 (3)
H1N10.213 (2)0.484 (3)0.5165 (12)0.034 (7)*
C10.22799 (14)0.47819 (19)0.60450 (7)0.0137 (3)
C20.30862 (15)0.6115 (2)0.61334 (7)0.0147 (3)
C30.35926 (16)0.6624 (2)0.67122 (8)0.0167 (3)
H30.413 (2)0.755 (3)0.6766 (10)0.024 (6)*
C40.32876 (16)0.5824 (2)0.71942 (8)0.0177 (3)
H40.363 (2)0.614 (3)0.7600 (11)0.026 (6)*
C50.24766 (16)0.4510 (2)0.71042 (8)0.0178 (3)
H50.227 (2)0.393 (3)0.7447 (11)0.028 (6)*
C60.19743 (16)0.3972 (2)0.65277 (7)0.0161 (3)
H60.1437 (19)0.309 (3)0.6478 (9)0.016 (5)*
C70.09838 (15)0.32381 (19)0.52344 (7)0.0142 (3)
H70.0643 (18)0.254 (2)0.5512 (9)0.013 (5)*
C80.05807 (15)0.29461 (19)0.46077 (7)0.0139 (3)
C90.10800 (15)0.38498 (19)0.41820 (7)0.0139 (3)
C100.06509 (16)0.3443 (2)0.35726 (7)0.0160 (3)
H100.101 (2)0.405 (3)0.3290 (11)0.027 (6)*
C11−0.02034 (15)0.2222 (2)0.34016 (7)0.0156 (3)
H11−0.049 (2)0.192 (3)0.2956 (11)0.025 (6)*
C12−0.06925 (15)0.1342 (2)0.38267 (7)0.0144 (3)
C13−0.03095 (15)0.17081 (19)0.44220 (7)0.0146 (3)
H13−0.066 (2)0.111 (3)0.4732 (10)0.024 (6)*
U11U22U33U12U13U23
O10.0240 (7)0.0158 (6)0.0154 (6)−0.0033 (5)0.0063 (5)0.0012 (4)
O20.0194 (6)0.0153 (6)0.0168 (6)−0.0061 (5)0.0040 (5)−0.0009 (4)
O30.0194 (6)0.0202 (6)0.0198 (6)−0.0099 (5)0.0062 (5)−0.0055 (5)
N10.0137 (6)0.0136 (6)0.0131 (6)−0.0001 (5)0.0018 (5)0.0008 (5)
C10.0141 (7)0.0136 (7)0.0128 (7)0.0030 (6)0.0014 (6)−0.0005 (5)
C20.0157 (7)0.0140 (7)0.0146 (7)0.0013 (6)0.0037 (6)0.0021 (6)
C30.0169 (8)0.0139 (7)0.0182 (8)−0.0009 (6)0.0014 (6)−0.0019 (6)
C40.0205 (8)0.0174 (8)0.0139 (7)0.0026 (6)0.0011 (6)−0.0008 (6)
C50.0203 (8)0.0185 (8)0.0150 (7)0.0031 (7)0.0045 (6)0.0021 (6)
C60.0168 (8)0.0151 (8)0.0163 (8)−0.0005 (6)0.0036 (6)0.0016 (6)
C70.0134 (7)0.0131 (7)0.0164 (7)0.0011 (6)0.0037 (6)0.0015 (6)
C80.0133 (7)0.0130 (7)0.0152 (7)−0.0002 (6)0.0025 (6)−0.0010 (6)
C90.0119 (7)0.0127 (7)0.0172 (7)0.0002 (6)0.0032 (6)−0.0001 (6)
C100.0176 (8)0.0159 (7)0.0153 (7)−0.0014 (6)0.0049 (6)0.0010 (6)
C110.0143 (7)0.0175 (7)0.0151 (7)0.0004 (6)0.0035 (6)−0.0011 (6)
C120.0125 (7)0.0123 (7)0.0183 (8)−0.0021 (6)0.0031 (6)−0.0016 (6)
C130.0155 (7)0.0134 (7)0.0158 (7)−0.0012 (6)0.0052 (6)0.0010 (6)
O1—C21.3608 (19)C5—C61.389 (2)
O1—H1O10.91 (3)C5—H50.98 (2)
O2—C91.316 (2)C6—H60.93 (2)
O3—C121.364 (2)C7—C81.427 (2)
O3—H1O30.95 (3)C7—H70.99 (2)
N1—C71.302 (2)C8—C131.413 (2)
N1—C11.410 (2)C8—C91.423 (2)
N1—H1N10.89 (3)C9—C101.413 (2)
C1—C61.389 (2)C10—C111.373 (2)
C1—C21.396 (2)C10—H100.97 (2)
C2—C31.387 (2)C11—C121.406 (2)
C3—C41.383 (2)C11—H111.03 (2)
C3—H30.96 (2)C12—C131.370 (2)
C4—C51.387 (3)C13—H131.00 (2)
C4—H40.96 (2)
C2—O1—H1O1109.4 (19)C1—C6—H6122.1 (13)
C12—O3—H1O3112.0 (17)N1—C7—C8121.96 (15)
C7—N1—C1128.22 (15)N1—C7—H7120.0 (12)
C7—N1—H1N1114.2 (17)C8—C7—H7118.0 (12)
C1—N1—H1N1117.6 (17)C13—C8—C9120.89 (14)
C6—C1—C2120.88 (14)C13—C8—C7118.07 (14)
C6—C1—N1123.52 (15)C9—C8—C7121.02 (15)
C2—C1—N1115.60 (14)O2—C9—C10121.61 (14)
O1—C2—C3123.09 (15)O2—C9—C8121.39 (14)
O1—C2—C1117.61 (14)C10—C9—C8116.99 (15)
C3—C2—C1119.28 (15)C11—C10—C9121.25 (15)
C4—C3—C2120.03 (16)C11—C10—H10122.8 (14)
C4—C3—H3121.6 (14)C9—C10—H10116.0 (14)
C2—C3—H3118.3 (14)C10—C11—C12121.19 (15)
C3—C4—C5120.51 (15)C10—C11—H11120.5 (12)
C3—C4—H4122.0 (14)C12—C11—H11118.3 (12)
C5—C4—H4117.5 (14)O3—C12—C13122.86 (14)
C4—C5—C6120.17 (16)O3—C12—C11117.72 (15)
C4—C5—H5120.3 (14)C13—C12—C11119.42 (15)
C6—C5—H5119.5 (14)C12—C13—C8120.25 (14)
C5—C6—C1119.12 (16)C12—C13—H13120.8 (13)
C5—C6—H6118.8 (13)C8—C13—H13119.0 (13)
C7—N1—C1—C65.5 (3)N1—C7—C8—C90.4 (2)
C7—N1—C1—C2−174.41 (15)C13—C8—C9—O2−179.28 (14)
C6—C1—C2—O1178.56 (15)C7—C8—C9—O2−0.7 (2)
N1—C1—C2—O1−1.6 (2)C13—C8—C9—C10−0.4 (2)
C6—C1—C2—C30.5 (2)C7—C8—C9—C10178.20 (15)
N1—C1—C2—C3−179.68 (14)O2—C9—C10—C11178.48 (15)
O1—C2—C3—C4−178.66 (15)C8—C9—C10—C11−0.4 (2)
C1—C2—C3—C4−0.7 (2)C9—C10—C11—C120.6 (3)
C2—C3—C4—C50.0 (3)C10—C11—C12—O3−179.51 (15)
C3—C4—C5—C60.8 (3)C10—C11—C12—C130.0 (2)
C4—C5—C6—C1−1.0 (3)O3—C12—C13—C8178.68 (14)
C2—C1—C6—C50.4 (2)C11—C12—C13—C8−0.8 (2)
N1—C1—C6—C5−179.48 (15)C9—C8—C13—C121.0 (2)
C1—N1—C7—C8178.69 (15)C7—C8—C13—C12−177.65 (15)
N1—C7—C8—C13179.06 (14)
D—H···AD—HH···AD···AD—H···A
O1—H1O1···O2i0.90 (3)1.74 (3)2.625 (2)166 (3)
O3—H1O3···O2ii0.95 (3)1.69 (3)2.633 (2)173 (2)
N1—H1N1···O20.89 (3)1.83 (3)2.581 (2)141 (2)
C13—H13···O1ii1.00 (2)2.60 (2)3.411 (3)137.8 (18)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1O1⋯O2i0.90 (3)1.74 (3)2.625 (2)166 (3)
O3—H1O3⋯O2ii0.95 (3)1.69 (3)2.633 (2)173 (2)
N1—H1N1⋯O20.89 (3)1.83 (3)2.581 (2)141 (2)
C13—H13⋯O1ii1.00 (2)2.60 (2)3.411 (3)137.8 (18)

Symmetry codes: (i) ; (ii) .

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