| Literature DB >> 21579365 |
Naser Eltaher Eltayeb, Siang Guan Teoh, Hoong-Kun Fun, Suchada Chantrapromma.
Abstract
The title compound, C(13)H(10)BrNO(2), crystallizes in a zwitterionic form. The zwitterion exists in a trans configuration about the C=N bond and is almost planar, the dihedral angle between the two benzene rings being 2.29 (9)°. An intra-molecular N-H⋯O hydrogen bond formed between the iminium NH(+) and the phenolate O(-) atoms generates an S(6) ring motif. In the crystal, the zwitterions are linked through O-H⋯O hydrogen bonds into chains along [101] and these chains are further connected through C-H⋯Br inter-actions into a two-dimensional network perpendicular to (101). C⋯C [3.572 (3)-3.592 (3) Å] and C⋯Br [3.5633 (19)-3.7339 (18) Å] short contacts are observed. The crystal studied was a twin with twin law 00, 00, 001 with a domain ratio of 0.09919 (2):0.90081 (2).Entities:
Year: 2010 PMID: 21579365 PMCID: PMC2979394 DOI: 10.1107/S1600536810015230
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H10BrNO2 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 3120 reflections |
| θ = 1.1–30.0° | |
| µ = 3.74 mm−1 | |
| β = 90.144 (3)° | Needle, yellow |
| 0.43 × 0.14 × 0.14 mm | |
| Bruker APEXII DUO CCD area-detector diffractometer | 3120 independent reflections |
| Radiation source: sealed tube | 3034 reflections with |
| graphite | |
| φ and ω scans | θmax = 30.0°, θmin = 1.1° |
| Absorption correction: multi-scan ( | |
| 8575 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3120 reflections | Δρmax = 0.59 e Å−3 |
| 191 parameters | Δρmin = −0.29 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 1480 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.027 (7) |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Br1 | 0.00526 (4) | 0.442840 (15) | 0.87673 (2) | 0.01554 (4) | |
| O1 | 0.5191 (3) | 0.66300 (7) | 0.29008 (19) | 0.0152 (2) | |
| O2 | 1.1314 (3) | 0.70088 (8) | 1.0194 (2) | 0.0166 (3) | |
| H1O2 | 1.2697 | 0.6925 | 1.0976 | 0.025* | |
| N1 | 0.8565 (3) | 0.69973 (8) | 0.6076 (2) | 0.0121 (3) | |
| H1N1 | 0.802 (6) | 0.6976 (16) | 0.470 (5) | 0.026 (7)* | |
| C1 | 0.4132 (4) | 0.61426 (10) | 0.4149 (3) | 0.0126 (3) | |
| C2 | 0.1934 (4) | 0.56695 (10) | 0.3446 (3) | 0.0140 (3) | |
| H2A | 0.133 (6) | 0.5756 (14) | 0.207 (4) | 0.020 (6)* | |
| C3 | 0.0797 (4) | 0.51628 (10) | 0.4781 (3) | 0.0138 (3) | |
| H3A | −0.064 (6) | 0.4852 (14) | 0.440 (4) | 0.021 (6)* | |
| C4 | 0.1776 (4) | 0.51058 (9) | 0.6919 (3) | 0.0129 (3) | |
| C5 | 0.3894 (4) | 0.55482 (9) | 0.7685 (3) | 0.0125 (3) | |
| H5A | 0.450 (6) | 0.5535 (16) | 0.905 (4) | 0.026 (7)* | |
| C6 | 0.5112 (4) | 0.60653 (9) | 0.6331 (3) | 0.0122 (3) | |
| C7 | 0.7261 (4) | 0.65154 (9) | 0.7227 (3) | 0.0123 (3) | |
| H7A | 0.787 (5) | 0.6470 (12) | 0.868 (4) | 0.009 (5)* | |
| C8 | 1.0707 (4) | 0.74911 (9) | 0.6695 (3) | 0.0117 (3) | |
| C9 | 1.2064 (4) | 0.74952 (9) | 0.8722 (3) | 0.0125 (3) | |
| C10 | 1.4149 (4) | 0.80132 (10) | 0.9137 (3) | 0.0148 (3) | |
| H10A | 1.494 (6) | 0.8047 (15) | 1.048 (5) | 0.022 (6)* | |
| C11 | 1.4940 (4) | 0.84982 (10) | 0.7569 (3) | 0.0159 (3) | |
| H11A | 1.639 (6) | 0.8847 (13) | 0.786 (4) | 0.018 (6)* | |
| C12 | 1.3635 (4) | 0.84799 (10) | 0.5548 (3) | 0.0160 (3) | |
| H12A | 1.427 (7) | 0.8788 (17) | 0.453 (5) | 0.036 (8)* | |
| C13 | 1.1523 (4) | 0.79797 (9) | 0.5130 (3) | 0.0139 (3) | |
| H13A | 1.045 (5) | 0.7956 (13) | 0.368 (3) | 0.014 (6)* |
| Br1 | 0.01876 (7) | 0.01522 (7) | 0.01262 (6) | −0.00425 (9) | −0.00307 (5) | 0.00324 (8) |
| O1 | 0.0161 (6) | 0.0183 (6) | 0.0113 (5) | −0.0031 (5) | −0.0034 (5) | 0.0033 (5) |
| O2 | 0.0167 (6) | 0.0224 (7) | 0.0106 (6) | −0.0044 (5) | −0.0054 (5) | 0.0042 (5) |
| N1 | 0.0122 (7) | 0.0140 (7) | 0.0102 (7) | −0.0004 (5) | −0.0033 (5) | 0.0003 (5) |
| C1 | 0.0122 (7) | 0.0150 (8) | 0.0106 (7) | 0.0001 (6) | −0.0012 (5) | −0.0002 (6) |
| C2 | 0.0156 (8) | 0.0172 (8) | 0.0092 (8) | −0.0007 (6) | −0.0030 (6) | −0.0007 (6) |
| C3 | 0.0136 (8) | 0.0141 (8) | 0.0137 (8) | −0.0022 (6) | −0.0024 (6) | −0.0018 (6) |
| C4 | 0.0142 (8) | 0.0120 (7) | 0.0126 (8) | −0.0007 (6) | −0.0003 (6) | 0.0015 (6) |
| C5 | 0.0150 (8) | 0.0137 (8) | 0.0087 (8) | 0.0011 (6) | −0.0030 (6) | 0.0007 (6) |
| C6 | 0.0116 (7) | 0.0140 (7) | 0.0109 (7) | 0.0014 (6) | −0.0014 (6) | −0.0021 (6) |
| C7 | 0.0123 (8) | 0.0139 (8) | 0.0108 (8) | 0.0003 (6) | −0.0020 (6) | −0.0007 (6) |
| C8 | 0.0114 (7) | 0.0114 (7) | 0.0122 (7) | 0.0001 (6) | −0.0033 (5) | −0.0010 (6) |
| C9 | 0.0127 (7) | 0.0146 (8) | 0.0103 (7) | 0.0003 (6) | −0.0012 (6) | −0.0007 (6) |
| C10 | 0.0146 (8) | 0.0174 (9) | 0.0123 (8) | −0.0012 (6) | −0.0044 (6) | −0.0020 (6) |
| C11 | 0.0141 (8) | 0.0154 (8) | 0.0182 (8) | −0.0021 (7) | −0.0016 (7) | −0.0017 (6) |
| C12 | 0.0172 (9) | 0.0147 (8) | 0.0161 (8) | −0.0007 (7) | −0.0011 (6) | 0.0022 (7) |
| C13 | 0.0128 (8) | 0.0160 (8) | 0.0129 (8) | 0.0008 (6) | −0.0026 (6) | 0.0011 (6) |
| Br1—C4 | 1.9011 (18) | C5—C6 | 1.411 (2) |
| O1—C1 | 1.304 (2) | C5—H5A | 0.89 (2) |
| O2—C9 | 1.346 (2) | C6—C7 | 1.424 (2) |
| O2—H1O2 | 0.8200 | C7—H7A | 0.95 (2) |
| N1—C7 | 1.310 (2) | C8—C13 | 1.397 (2) |
| N1—C8 | 1.417 (2) | C8—C9 | 1.409 (2) |
| N1—H1N1 | 0.89 (3) | C9—C10 | 1.401 (2) |
| C1—C2 | 1.425 (2) | C10—C11 | 1.391 (3) |
| C1—C6 | 1.439 (2) | C10—H10A | 0.92 (3) |
| C2—C3 | 1.376 (3) | C11—C12 | 1.396 (3) |
| C2—H2A | 0.91 (3) | C11—H11A | 0.96 (3) |
| C3—C4 | 1.409 (2) | C12—C13 | 1.387 (3) |
| C3—H3A | 0.92 (3) | C12—H12A | 0.91 (3) |
| C4—C5 | 1.376 (3) | C13—H13A | 1.03 (2) |
| C9—O2—H1O2 | 109.5 | N1—C7—C6 | 121.74 (16) |
| C7—N1—C8 | 129.42 (16) | N1—C7—H7A | 116.6 (14) |
| C7—N1—H1N1 | 111.3 (19) | C6—C7—H7A | 121.6 (14) |
| C8—N1—H1N1 | 119.2 (18) | C13—C8—C9 | 120.02 (16) |
| O1—C1—C2 | 122.15 (15) | C13—C8—N1 | 115.98 (15) |
| O1—C1—C6 | 121.08 (16) | C9—C8—N1 | 123.97 (16) |
| C2—C1—C6 | 116.76 (16) | O2—C9—C10 | 122.23 (15) |
| C3—C2—C1 | 121.85 (16) | O2—C9—C8 | 119.39 (15) |
| C3—C2—H2A | 125.0 (16) | C10—C9—C8 | 118.39 (16) |
| C1—C2—H2A | 113.1 (17) | C11—C10—C9 | 121.08 (16) |
| C2—C3—C4 | 120.08 (16) | C11—C10—H10A | 119.3 (18) |
| C2—C3—H3A | 124.6 (16) | C9—C10—H10A | 119.6 (17) |
| C4—C3—H3A | 115.3 (16) | C10—C11—C12 | 120.15 (17) |
| C5—C4—C3 | 120.59 (16) | C10—C11—H11A | 120.5 (15) |
| C5—C4—Br1 | 120.14 (13) | C12—C11—H11A | 119.4 (15) |
| C3—C4—Br1 | 119.24 (13) | C13—C12—C11 | 119.38 (17) |
| C4—C5—C6 | 120.14 (16) | C13—C12—H12A | 122 (2) |
| C4—C5—H5A | 122 (2) | C11—C12—H12A | 118 (2) |
| C6—C5—H5A | 118 (2) | C12—C13—C8 | 120.94 (16) |
| C5—C6—C7 | 117.51 (15) | C12—C13—H13A | 122.2 (13) |
| C5—C6—C1 | 120.57 (16) | C8—C13—H13A | 116.8 (13) |
| C7—C6—C1 | 121.89 (16) | ||
| O1—C1—C2—C3 | −179.04 (17) | C1—C6—C7—N1 | −3.8 (3) |
| C6—C1—C2—C3 | 0.1 (3) | C7—N1—C8—C13 | −175.04 (17) |
| C1—C2—C3—C4 | 0.8 (3) | C7—N1—C8—C9 | 7.1 (3) |
| C2—C3—C4—C5 | −0.8 (3) | C13—C8—C9—O2 | −178.12 (16) |
| C2—C3—C4—Br1 | 177.31 (14) | N1—C8—C9—O2 | −0.3 (3) |
| C3—C4—C5—C6 | 0.0 (3) | C13—C8—C9—C10 | 2.3 (3) |
| Br1—C4—C5—C6 | −178.09 (13) | N1—C8—C9—C10 | −179.92 (17) |
| C4—C5—C6—C7 | 178.93 (16) | O2—C9—C10—C11 | 178.26 (18) |
| C4—C5—C6—C1 | 0.8 (3) | C8—C9—C10—C11 | −2.1 (3) |
| O1—C1—C6—C5 | 178.25 (17) | C9—C10—C11—C12 | 0.6 (3) |
| C2—C1—C6—C5 | −0.8 (2) | C10—C11—C12—C13 | 0.8 (3) |
| O1—C1—C6—C7 | 0.2 (3) | C11—C12—C13—C8 | −0.6 (3) |
| C2—C1—C6—C7 | −178.85 (16) | C9—C8—C13—C12 | −0.9 (3) |
| C8—N1—C7—C6 | 179.25 (17) | N1—C8—C13—C12 | −178.91 (16) |
| C5—C6—C7—N1 | 178.12 (16) |
| H··· | ||||
| O2—H1O2···O1i | 0.82 | 1.76 | 2.5641 (19) | 169 |
| N1—H1N1···O1 | 0.89 (3) | 1.84 (3) | 2.6129 (18) | 143 (3) |
| C7—H7A···O2 | 0.95 (2) | 2.12 (2) | 2.794 (2) | 127.1 (18) |
| C11—H11A···Br1ii | 0.96 (3) | 2.89 (3) | 3.6982 (19) | 143.1 (19) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H1 | 0.82 | 1.76 | 2.5641 (19) | 169 |
| N1—H1 | 0.89 (3) | 1.84 (3) | 2.6129 (18) | 143 (3) |
| C7—H7 | 0.95 (2) | 2.12 (2) | 2.794 (2) | 127.1 (18) |
| C11—H11 | 0.96 (3) | 2.89 (3) | 3.6982 (19) | 143.1 (19) |
Symmetry codes: (i) ; (ii) .