| Literature DB >> 21582217 |
Abstract
The title Schiff base compound, C(10)H(13)NO(3), obtained by the reaction of 2-hydr-oxy-3-methoxy-benzaldehyde and 2-amino-ethanol in methanol solution, crystallizes in a zwitterionic form, in which the mol-ecule adopts a trans configuration about the central C=N bond. An intra-molecular N-H⋯O hydrogen bond occurs. In the crystal structure, mol-ecules are linked into chains by inter-molecular O-H⋯O hydrogen bonding.Entities:
Year: 2009 PMID: 21582217 PMCID: PMC2968608 DOI: 10.1107/S1600536809005297
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H13NO3 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2ac | Cell parameters from 1828 reflections |
| θ = 2.9–20.4° | |
| µ = 0.10 mm−1 | |
| Block, yellow | |
| 0.30 × 0.30 × 0.12 mm |
| Bruker APEX CCD diffractometer | 1041 independent reflections |
| Radiation source: fine-focus sealed tube | 923 reflections with |
| graphite | |
| φ and ω scans | θmax = 26.0°, θmin = 2.9° |
| Absorption correction: multi-scan ( | |
| 7345 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1041 reflections | (Δ/σ)max < 0.001 |
| 127 parameters | Δρmax = 0.09 e Å−3 |
| 1 restraint | Δρmin = −0.15 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.53278 (16) | 0.7444 (3) | 0.0860 (2) | 0.0408 (5) | |
| C2 | 0.57651 (16) | 0.9338 (3) | 0.0535 (2) | 0.0451 (6) | |
| C3 | 0.69788 (18) | 1.1717 (4) | 0.1022 (3) | 0.0718 (9) | |
| H3A | 0.6519 | 1.2763 | 0.1164 | 0.108* | |
| H3B | 0.7207 | 1.1807 | 0.0183 | 0.108* | |
| H3C | 0.7497 | 1.1885 | 0.1588 | 0.108* | |
| C4 | 0.5396 (2) | 1.0535 (4) | −0.0390 (3) | 0.0557 (7) | |
| H4 | 0.5680 | 1.1776 | −0.0566 | 0.067* | |
| C5 | 0.4599 (2) | 0.9927 (5) | −0.1078 (3) | 0.0625 (8) | |
| H5 | 0.4366 | 1.0750 | −0.1710 | 0.075* | |
| C6 | 0.41744 (18) | 0.8135 (4) | −0.0814 (3) | 0.0570 (7) | |
| H6 | 0.3655 | 0.7718 | −0.1278 | 0.068* | |
| C7 | 0.45145 (15) | 0.6891 (4) | 0.0160 (2) | 0.0436 (5) | |
| C8 | 0.39971 (16) | 0.5130 (4) | 0.0485 (2) | 0.0460 (6) | |
| H8 | 0.3479 | 0.4790 | −0.0006 | 0.055* | |
| C9 | 0.36073 (17) | 0.2262 (4) | 0.1804 (3) | 0.0535 (6) | |
| H9A | 0.4005 | 0.1091 | 0.1961 | 0.064* | |
| H9B | 0.3173 | 0.1915 | 0.1140 | 0.064* | |
| C10 | 0.30532 (16) | 0.2758 (4) | 0.2962 (3) | 0.0529 (6) | |
| H10A | 0.2717 | 0.1553 | 0.3232 | 0.064* | |
| H10B | 0.3490 | 0.3137 | 0.3617 | 0.064* | |
| N1 | 0.41934 (14) | 0.3958 (3) | 0.1415 (2) | 0.0478 (5) | |
| H1 | 0.4701 | 0.4199 | 0.1829 | 0.057* | |
| O1 | 0.56592 (11) | 0.6322 (2) | 0.17429 (18) | 0.0486 (4) | |
| O2 | 0.65545 (11) | 0.9784 (3) | 0.1213 (2) | 0.0564 (5) | |
| O3 | 0.23996 (12) | 0.4345 (2) | 0.2785 (2) | 0.0584 (5) | |
| H3 | 0.1946 | 0.3924 | 0.2387 | 0.088* |
| C1 | 0.0358 (11) | 0.0387 (12) | 0.0478 (13) | 0.0046 (9) | 0.0063 (10) | −0.0074 (11) |
| C2 | 0.0393 (12) | 0.0407 (13) | 0.0553 (16) | 0.0030 (10) | 0.0127 (11) | −0.0106 (12) |
| C3 | 0.0623 (17) | 0.0421 (15) | 0.111 (3) | −0.0143 (14) | 0.0175 (19) | −0.0154 (16) |
| C4 | 0.0608 (17) | 0.0435 (14) | 0.0629 (17) | 0.0038 (13) | 0.0206 (15) | 0.0050 (13) |
| C5 | 0.0670 (18) | 0.0703 (19) | 0.0502 (16) | 0.0090 (15) | 0.0064 (14) | 0.0132 (15) |
| C6 | 0.0507 (14) | 0.0726 (18) | 0.0477 (15) | 0.0022 (13) | −0.0017 (12) | 0.0014 (14) |
| C7 | 0.0378 (12) | 0.0484 (13) | 0.0445 (13) | 0.0014 (11) | 0.0028 (10) | −0.0071 (12) |
| C8 | 0.0341 (12) | 0.0521 (14) | 0.0520 (14) | 0.0004 (10) | −0.0026 (11) | −0.0117 (12) |
| C9 | 0.0420 (13) | 0.0424 (13) | 0.0760 (18) | −0.0020 (10) | −0.0002 (14) | 0.0002 (13) |
| C10 | 0.0422 (12) | 0.0533 (15) | 0.0633 (16) | 0.0033 (11) | −0.0071 (12) | 0.0138 (13) |
| N1 | 0.0354 (10) | 0.0481 (12) | 0.0600 (14) | −0.0036 (9) | −0.0025 (9) | −0.0050 (11) |
| O1 | 0.0400 (8) | 0.0440 (9) | 0.0619 (11) | −0.0040 (7) | −0.0082 (8) | 0.0003 (9) |
| O2 | 0.0436 (9) | 0.0433 (9) | 0.0822 (14) | −0.0083 (8) | 0.0020 (9) | −0.0062 (9) |
| O3 | 0.0410 (9) | 0.0591 (10) | 0.0750 (13) | 0.0088 (9) | −0.0069 (9) | −0.0038 (10) |
| C1—O1 | 1.291 (3) | C6—H6 | 0.9300 |
| C1—C7 | 1.423 (3) | C7—C8 | 1.416 (3) |
| C1—C2 | 1.436 (3) | C8—N1 | 1.294 (3) |
| C2—O2 | 1.366 (3) | C8—H8 | 0.9300 |
| C2—C4 | 1.373 (4) | C9—N1 | 1.453 (3) |
| C3—O2 | 1.422 (3) | C9—C10 | 1.508 (4) |
| C3—H3A | 0.9600 | C9—H9A | 0.9700 |
| C3—H3B | 0.9600 | C9—H9B | 0.9700 |
| C3—H3C | 0.9600 | C10—O3 | 1.409 (3) |
| C4—C5 | 1.407 (4) | C10—H10A | 0.9700 |
| C4—H4 | 0.9300 | C10—H10B | 0.9700 |
| C5—C6 | 1.355 (4) | N1—H1 | 0.8600 |
| C5—H5 | 0.9300 | O3—H3 | 0.8200 |
| C6—C7 | 1.415 (4) | ||
| O1—C1—C7 | 122.5 (2) | C6—C7—C1 | 121.3 (2) |
| O1—C1—C2 | 121.3 (2) | C8—C7—C1 | 119.8 (2) |
| C7—C1—C2 | 116.2 (2) | N1—C8—C7 | 124.6 (2) |
| O2—C2—C4 | 125.1 (2) | N1—C8—H8 | 117.7 |
| O2—C2—C1 | 114.1 (2) | C7—C8—H8 | 117.7 |
| C4—C2—C1 | 120.8 (2) | N1—C9—C10 | 111.6 (2) |
| O2—C3—H3A | 109.5 | N1—C9—H9A | 109.3 |
| O2—C3—H3B | 109.5 | C10—C9—H9A | 109.3 |
| H3A—C3—H3B | 109.5 | N1—C9—H9B | 109.3 |
| O2—C3—H3C | 109.5 | C10—C9—H9B | 109.3 |
| H3A—C3—H3C | 109.5 | H9A—C9—H9B | 108.0 |
| H3B—C3—H3C | 109.5 | O3—C10—C9 | 113.0 (2) |
| C2—C4—C5 | 121.5 (2) | O3—C10—H10A | 109.0 |
| C2—C4—H4 | 119.2 | C9—C10—H10A | 109.0 |
| C5—C4—H4 | 119.2 | O3—C10—H10B | 109.0 |
| C6—C5—C4 | 119.5 (3) | C9—C10—H10B | 109.0 |
| C6—C5—H5 | 120.2 | H10A—C10—H10B | 107.8 |
| C4—C5—H5 | 120.2 | C8—N1—C9 | 124.0 (2) |
| C5—C6—C7 | 120.6 (3) | C8—N1—H1 | 118.0 |
| C5—C6—H6 | 119.7 | C9—N1—H1 | 118.0 |
| C7—C6—H6 | 119.7 | C2—O2—C3 | 117.4 (2) |
| C6—C7—C8 | 118.8 (2) | C10—O3—H3 | 109.5 |
| O1—C1—C2—O2 | 1.6 (3) | C2—C1—C7—C6 | 1.1 (3) |
| C7—C1—C2—O2 | −178.65 (19) | O1—C1—C7—C8 | 4.8 (3) |
| O1—C1—C2—C4 | −178.8 (2) | C2—C1—C7—C8 | −175.0 (2) |
| C7—C1—C2—C4 | 1.0 (3) | C6—C7—C8—N1 | −174.5 (2) |
| O2—C2—C4—C5 | 177.5 (2) | C1—C7—C8—N1 | 1.8 (3) |
| C1—C2—C4—C5 | −2.1 (3) | N1—C9—C10—O3 | 63.7 (3) |
| C2—C4—C5—C6 | 1.0 (4) | C7—C8—N1—C9 | 174.2 (2) |
| C4—C5—C6—C7 | 1.2 (4) | C10—C9—N1—C8 | −104.5 (3) |
| C5—C6—C7—C8 | 174.0 (2) | C4—C2—O2—C3 | 5.8 (3) |
| C5—C6—C7—C1 | −2.2 (4) | C1—C2—O2—C3 | −174.6 (2) |
| O1—C1—C7—C6 | −179.1 (2) |
| H··· | ||||
| N1—H1···O1 | 0.86 | 1.95 | 2.617 (2) | 134 |
| O3—H3···O1i | 0.82 | 1.95 | 2.741 (3) | 161 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1 | 0.86 | 1.95 | 2.617 (2) | 134 |
| O3—H3⋯O1i | 0.82 | 1.95 | 2.741 (3) | 161 |
Symmetry code: (i) .