| Literature DB >> 21583801 |
Chun-Xia Ren, Su-Yun Li, Zhao-Zhong Yin, Xiang Lu, Yu-Qiang Ding.
Abstract
In the title compound, [MnCl(2)(C(11)H(13)N(5))], the Mn(II) ion is five-coordinated in a distorted square-pyramidal geometry, with three N atoms from the neutral tridentate 2,6-bis-(4,5-dihydro-1H-imidazol-2-yl)pyridine ligand and one chloride ion forming the basal plane and the other chloride ion in the apical position. Both dihydro-imidazole rings adopt envelope conformations. In the crystal structure, mol-ecules are linked into a three-dimensional network by N-H⋯Cl and C-H⋯Cl hydrogen bonds.Entities:
Year: 2009 PMID: 21583801 PMCID: PMC2977615 DOI: 10.1107/S1600536809014354
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [MnCl2(C11H13N5)] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 1365 reflections |
| θ = 2.3–23.1° | |
| µ = 1.28 mm−1 | |
| β = 100.313 (9)° | Block, yellow |
| 0.30 × 0.25 × 0.21 mm | |
| Bruker SMART CCD area-detector diffractometer | 3317 independent reflections |
| Radiation source: fine-focus sealed tube | 1750 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.9°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 8507 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 3317 reflections | Δρmax = 0.68 e Å−3 |
| 173 parameters | Δρmin = −0.53 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.016 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Mn1 | 1.09096 (8) | 0.66191 (6) | 0.31687 (6) | 0.0431 (3) | |
| Cl1 | 1.33924 (15) | 0.63750 (13) | 0.29973 (12) | 0.0605 (5) | |
| Cl2 | 0.96929 (17) | 0.77218 (13) | 0.17311 (13) | 0.0697 (5) | |
| N1 | 0.9960 (5) | 0.8515 (3) | 0.5846 (4) | 0.0519 (12) | |
| H1 | 0.9262 | 0.8644 | 0.6198 | 0.062* | |
| N2 | 1.1031 (5) | 0.7757 (3) | 0.4559 (3) | 0.0492 (11) | |
| N3 | 0.9235 (4) | 0.6172 (3) | 0.4186 (3) | 0.0360 (9) | |
| N4 | 0.9927 (4) | 0.5062 (3) | 0.2597 (3) | 0.0458 (11) | |
| N5 | 0.8274 (5) | 0.3790 (4) | 0.2646 (4) | 0.0542 (12) | |
| H5A | 0.7647 | 0.3429 | 0.2923 | 0.065* | |
| C1 | 1.1869 (7) | 0.8745 (5) | 0.4878 (5) | 0.0587 (16) | |
| H1A | 1.1677 | 0.9266 | 0.4297 | 0.070* | |
| H1B | 1.2911 | 0.8606 | 0.5045 | 0.070* | |
| C2 | 1.1298 (6) | 0.9119 (5) | 0.5908 (5) | 0.0606 (16) | |
| H2A | 1.1988 | 0.8957 | 0.6573 | 0.073* | |
| H2B | 1.1103 | 0.9870 | 0.5881 | 0.073* | |
| C3 | 1.0010 (5) | 0.7721 (4) | 0.5141 (4) | 0.0413 (12) | |
| C4 | 0.8964 (5) | 0.6824 (4) | 0.4970 (4) | 0.0359 (11) | |
| C5 | 0.7820 (5) | 0.6653 (4) | 0.5540 (4) | 0.0432 (12) | |
| H5 | 0.7626 | 0.7126 | 0.6069 | 0.052* | |
| C6 | 0.6986 (6) | 0.5756 (4) | 0.5292 (4) | 0.0510 (14) | |
| H6 | 0.6222 | 0.5613 | 0.5662 | 0.061* | |
| C7 | 0.7285 (5) | 0.5069 (4) | 0.4493 (4) | 0.0474 (13) | |
| H7 | 0.6737 | 0.4459 | 0.4325 | 0.057* | |
| C8 | 0.8416 (5) | 0.5311 (4) | 0.3951 (4) | 0.0387 (11) | |
| C9 | 0.8875 (5) | 0.4711 (4) | 0.3049 (4) | 0.0388 (11) | |
| C10 | 0.8854 (7) | 0.3506 (5) | 0.1671 (5) | 0.0618 (17) | |
| H10A | 0.8137 | 0.3615 | 0.1008 | 0.074* | |
| H10B | 0.9186 | 0.2781 | 0.1700 | 0.074* | |
| C11 | 1.0136 (6) | 0.4282 (5) | 0.1743 (5) | 0.0595 (16) | |
| H11A | 1.1062 | 0.3918 | 0.1950 | 0.071* | |
| H11B | 1.0123 | 0.4629 | 0.1043 | 0.071* |
| Mn1 | 0.0457 (5) | 0.0447 (5) | 0.0447 (5) | −0.0006 (4) | 0.0233 (4) | 0.0035 (4) |
| Cl1 | 0.0490 (8) | 0.0707 (10) | 0.0689 (9) | 0.0051 (7) | 0.0298 (7) | 0.0207 (8) |
| Cl2 | 0.0638 (10) | 0.0713 (11) | 0.0796 (11) | 0.0170 (8) | 0.0280 (8) | 0.0339 (9) |
| N1 | 0.056 (3) | 0.046 (3) | 0.061 (3) | −0.016 (2) | 0.029 (2) | −0.013 (2) |
| N2 | 0.050 (3) | 0.049 (3) | 0.054 (3) | −0.013 (2) | 0.025 (2) | 0.000 (2) |
| N3 | 0.041 (2) | 0.034 (2) | 0.035 (2) | −0.0027 (18) | 0.0134 (18) | 0.0013 (19) |
| N4 | 0.052 (3) | 0.044 (3) | 0.046 (2) | 0.003 (2) | 0.024 (2) | −0.002 (2) |
| N5 | 0.065 (3) | 0.045 (3) | 0.058 (3) | −0.009 (2) | 0.025 (2) | −0.010 (2) |
| C1 | 0.062 (4) | 0.048 (3) | 0.071 (4) | −0.015 (3) | 0.027 (3) | −0.001 (3) |
| C2 | 0.065 (4) | 0.054 (4) | 0.066 (4) | −0.014 (3) | 0.021 (3) | −0.011 (3) |
| C3 | 0.042 (3) | 0.044 (3) | 0.040 (3) | −0.003 (2) | 0.014 (2) | 0.002 (2) |
| C4 | 0.043 (3) | 0.032 (3) | 0.036 (2) | −0.001 (2) | 0.017 (2) | 0.004 (2) |
| C5 | 0.049 (3) | 0.045 (3) | 0.041 (3) | −0.002 (3) | 0.021 (2) | 0.001 (2) |
| C6 | 0.054 (3) | 0.050 (3) | 0.058 (3) | −0.004 (3) | 0.034 (3) | 0.004 (3) |
| C7 | 0.043 (3) | 0.048 (3) | 0.055 (3) | −0.008 (3) | 0.020 (3) | 0.000 (3) |
| C8 | 0.039 (3) | 0.037 (3) | 0.042 (3) | 0.003 (2) | 0.013 (2) | 0.004 (2) |
| C9 | 0.046 (3) | 0.032 (3) | 0.039 (3) | 0.003 (2) | 0.009 (2) | 0.004 (2) |
| C10 | 0.076 (4) | 0.056 (4) | 0.056 (3) | 0.012 (3) | 0.017 (3) | −0.012 (3) |
| C11 | 0.066 (4) | 0.064 (4) | 0.054 (3) | 0.003 (3) | 0.027 (3) | −0.012 (3) |
| Mn1—N2 | 2.234 (4) | C1—H1A | 0.97 |
| Mn1—N4 | 2.237 (4) | C1—H1B | 0.97 |
| Mn1—N3 | 2.244 (4) | C2—H2A | 0.97 |
| Mn1—Cl1 | 2.3759 (19) | C2—H2B | 0.97 |
| Mn1—Cl2 | 2.3842 (18) | C3—C4 | 1.486 (7) |
| N1—C3 | 1.340 (7) | C4—C5 | 1.397 (6) |
| N1—C2 | 1.450 (7) | C5—C6 | 1.380 (8) |
| N1—H1 | 0.86 | C5—H5 | 0.93 |
| N2—C3 | 1.291 (6) | C6—C7 | 1.382 (7) |
| N2—C1 | 1.489 (7) | C6—H6 | 0.93 |
| N3—C4 | 1.333 (6) | C7—C8 | 1.380 (6) |
| N3—C8 | 1.333 (6) | C7—H7 | 0.93 |
| N4—C9 | 1.289 (6) | C8—C9 | 1.476 (7) |
| N4—C11 | 1.487 (7) | C10—C11 | 1.535 (9) |
| N5—C9 | 1.352 (7) | C10—H10A | 0.97 |
| N5—C10 | 1.455 (7) | C10—H10B | 0.97 |
| N5—H5A | 0.86 | C11—H11A | 0.97 |
| C1—C2 | 1.542 (8) | C11—H11B | 0.97 |
| N2—Mn1—N4 | 140.86 (14) | C1—C2—H2B | 111.3 |
| N2—Mn1—N3 | 71.04 (14) | H2A—C2—H2B | 109.2 |
| N4—Mn1—N3 | 70.69 (14) | N2—C3—N1 | 116.8 (5) |
| N2—Mn1—Cl1 | 103.72 (12) | N2—C3—C4 | 118.3 (5) |
| N4—Mn1—Cl1 | 101.82 (11) | N1—C3—C4 | 124.8 (4) |
| N3—Mn1—Cl1 | 143.13 (12) | N3—C4—C5 | 122.1 (5) |
| N2—Mn1—Cl2 | 98.52 (13) | N3—C4—C3 | 112.1 (4) |
| N4—Mn1—Cl2 | 99.76 (12) | C5—C4—C3 | 125.8 (4) |
| N3—Mn1—Cl2 | 106.47 (12) | C6—C5—C4 | 117.7 (5) |
| Cl1—Mn1—Cl2 | 110.39 (6) | C6—C5—H5 | 121.2 |
| C3—N1—C2 | 107.6 (4) | C4—C5—H5 | 121.2 |
| C3—N1—H1 | 126.2 | C5—C6—C7 | 120.1 (5) |
| C2—N1—H1 | 126.2 | C5—C6—H6 | 119.9 |
| C3—N2—C1 | 106.5 (4) | C7—C6—H6 | 119.9 |
| C3—N2—Mn1 | 117.8 (4) | C8—C7—C6 | 118.6 (5) |
| C1—N2—Mn1 | 134.3 (3) | C8—C7—H7 | 120.7 |
| C4—N3—C8 | 119.6 (4) | C6—C7—H7 | 120.7 |
| C4—N3—Mn1 | 119.4 (3) | N3—C8—C7 | 121.9 (5) |
| C8—N3—Mn1 | 120.7 (3) | N3—C8—C9 | 110.9 (4) |
| C9—N4—C11 | 106.5 (5) | C7—C8—C9 | 127.1 (5) |
| C9—N4—Mn1 | 117.8 (3) | N4—C9—N5 | 115.8 (5) |
| C11—N4—Mn1 | 135.6 (3) | N4—C9—C8 | 119.6 (5) |
| C9—N5—C10 | 109.2 (5) | N5—C9—C8 | 124.5 (4) |
| C9—N5—H5A | 125.4 | N5—C10—C11 | 101.1 (5) |
| C10—N5—H5A | 125.4 | N5—C10—H10A | 111.6 |
| N2—C1—C2 | 103.7 (4) | C11—C10—H10A | 111.6 |
| N2—C1—H1A | 111.0 | N5—C10—H10B | 111.6 |
| C2—C1—H1A | 111.0 | C11—C10—H10B | 111.6 |
| N2—C1—H1B | 111.0 | H10A—C10—H10B | 109.4 |
| C2—C1—H1B | 111.0 | N4—C11—C10 | 105.6 (4) |
| H1A—C1—H1B | 109.0 | N4—C11—H11A | 110.6 |
| N1—C2—C1 | 102.3 (5) | C10—C11—H11A | 110.6 |
| N1—C2—H2A | 111.3 | N4—C11—H11B | 110.6 |
| C1—C2—H2A | 111.3 | C10—C11—H11B | 110.6 |
| N1—C2—H2B | 111.3 | H11A—C11—H11B | 108.7 |
| H··· | ||||
| N5—H5A···Cl2i | 0.86 | 2.46 | 3.287 (5) | 161 |
| N1—H1···Cl1ii | 0.86 | 2.50 | 3.261 (5) | 147 |
| C7—H7···Cl2i | 0.93 | 2.78 | 3.681 (6) | 164 |
Selected bond lengths (Å)
| Mn1—N2 | 2.234 (4) |
| Mn1—N4 | 2.237 (4) |
| Mn1—N3 | 2.244 (4) |
| Mn1—Cl1 | 2.3759 (19) |
| Mn1—Cl2 | 2.3842 (18) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N5—H5 | 0.86 | 2.46 | 3.287 (5) | 161 |
| N1—H1⋯Cl1ii | 0.86 | 2.50 | 3.261 (5) | 147 |
| C7—H7⋯Cl2i | 0.93 | 2.78 | 3.681 (6) | 164 |
Symmetry codes: (i) ; (ii) .