| Literature DB >> 21577391 |
Shao-Ming Shang, Chun-Xia Ren, Xin Wang, Lu-De Lu, Xu-Jie Yang.
Abstract
In the cation of the title compound, [Mn(C(11)H(13)N(5))(2)](ClO(4))(2)·CH(3)CN, the metal atom is located on a twofold rotation axis and is six-coordinated by six N atoms from two different 2,6-bis-(4,5-dihydro-1H-imidazol-2-yl)pyridine (bip) ligands in a distorted octahedral geometry. The O atoms of the perchlorate anions are disordered with occupancies in the ratio 0.593 (10):0.407 (10). In the crystal, mol-ecules are stabilized by two N-H⋯O hydrogen bonds, forming zigzag chains along the a axis, which are further inter-connected by N-H⋯O hydrogen bonds and π-π inter-actions [centroid-centroid distance = 3.50 (1) Å] into a three-dimensional network.Entities:
Year: 2009 PMID: 21577391 PMCID: PMC2970088 DOI: 10.1107/S1600536809029195
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Mn(C11H13N5)2](ClO4)2·C2H3N | |
| Monoclinic, | Mo |
| Cell parameters from 668 reflections | |
| θ = 2.0–25.1° | |
| µ = 0.65 mm−1 | |
| β = 123.893 (10)° | |
| Block, yellow | |
| 0.28 × 0.21 × 0.14 mm |
| Bruker SMART CCD area-detector diffractometer | 2821 independent reflections |
| Radiation source: fine-focus sealed tube | 1277 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.1°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 7799 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2821 reflections | (Δ/σ)max = 0.001 |
| 246 parameters | Δρmax = 0.33 e Å−3 |
| 94 restraints | Δρmin = −0.27 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Mn1 | 0.5000 | 0.94417 (7) | 0.7500 | 0.0488 (3) | |
| N1 | 0.51856 (17) | 0.8931 (3) | 0.9132 (2) | 0.0468 (8) | |
| N2 | 0.59227 (18) | 1.0487 (2) | 0.8898 (2) | 0.0539 (8) | |
| N3 | 0.6779 (2) | 1.0731 (3) | 1.0725 (3) | 0.0708 (10) | |
| H3A | 0.6979 | 1.0635 | 1.1416 | 0.085* | |
| N4 | 0.40797 (17) | 0.8262 (2) | 0.7177 (2) | 0.0524 (8) | |
| N5 | 0.3602 (2) | 0.7083 (3) | 0.7785 (3) | 0.0833 (12) | |
| H5A | 0.3581 | 0.6730 | 0.8271 | 0.100* | |
| C1 | 0.6436 (2) | 1.1375 (4) | 0.9029 (3) | 0.0746 (13) | |
| H1A | 0.6130 | 1.2013 | 0.8721 | 0.090* | |
| H1B | 0.6693 | 1.1225 | 0.8652 | 0.090* | |
| C2 | 0.7041 (3) | 1.1503 (4) | 1.0259 (3) | 0.0785 (14) | |
| H2A | 0.7566 | 1.1347 | 1.0453 | 0.094* | |
| H2B | 0.7032 | 1.2208 | 1.0504 | 0.094* | |
| C3 | 0.6168 (2) | 1.0191 (3) | 0.9886 (3) | 0.0509 (10) | |
| C4 | 0.5788 (2) | 0.9317 (3) | 1.0073 (3) | 0.0450 (9) | |
| C5 | 0.6011 (2) | 0.8891 (3) | 1.1076 (3) | 0.0630 (12) | |
| H5 | 0.6430 | 0.9169 | 1.1733 | 0.076* | |
| C6 | 0.5594 (3) | 0.8037 (4) | 1.1076 (3) | 0.0757 (14) | |
| H6 | 0.5736 | 0.7730 | 1.1741 | 0.091* | |
| C7 | 0.4970 (2) | 0.7637 (4) | 1.0097 (3) | 0.0678 (13) | |
| H7 | 0.4689 | 0.7062 | 1.0090 | 0.081* | |
| C8 | 0.4778 (2) | 0.8114 (3) | 0.9136 (3) | 0.0506 (10) | |
| C9 | 0.4140 (2) | 0.7806 (3) | 0.8007 (3) | 0.0525 (11) | |
| C10 | 0.3053 (3) | 0.6981 (4) | 0.6593 (3) | 0.0818 (14) | |
| H10A | 0.2523 | 0.7166 | 0.6361 | 0.098* | |
| H10B | 0.3054 | 0.6279 | 0.6335 | 0.098* | |
| N6 | 0.5000 | 0.3462 (7) | 0.7500 | 0.186 (4) | |
| C12 | 0.5000 | 0.5403 (7) | 0.7500 | 0.178 (5) | |
| H12B | 0.5294 | 0.5712 | 0.7238 | 0.214* | 0.50 |
| H12A | 0.5189 | 0.5583 | 0.8247 | 0.214* | 0.50 |
| H12C | 0.4453 | 0.5583 | 0.7073 | 0.214* | 0.50 |
| C13 | 0.5000 | 0.4339 (7) | 0.7500 | 0.116 (3) | |
| C11 | 0.3378 (2) | 0.7797 (3) | 0.6178 (3) | 0.0664 (12) | |
| H11A | 0.3520 | 0.7454 | 0.5720 | 0.080* | |
| H11B | 0.2991 | 0.8334 | 0.5742 | 0.080* | |
| Cl1 | 0.32690 (9) | 0.52285 (13) | 0.39585 (12) | 0.1026 (5) | |
| O1 | 0.3119 (7) | 0.5391 (11) | 0.4824 (8) | 0.147 (6) | 0.407 (10) |
| O2 | 0.4047 (4) | 0.4898 (11) | 0.4424 (8) | 0.152 (7) | 0.407 (10) |
| O3 | 0.2745 (6) | 0.4409 (11) | 0.3284 (13) | 0.209 (9) | 0.407 (10) |
| O4 | 0.3090 (11) | 0.6156 (10) | 0.3332 (15) | 0.264 (11) | 0.407 (10) |
| O1' | 0.3558 (5) | 0.6031 (6) | 0.4718 (7) | 0.151 (5) | 0.593 (10) |
| O2' | 0.3455 (6) | 0.4194 (5) | 0.4361 (7) | 0.139 (5) | 0.593 (10) |
| O3' | 0.2464 (3) | 0.5354 (7) | 0.3137 (5) | 0.139 (4) | 0.593 (10) |
| O4' | 0.3628 (7) | 0.5401 (8) | 0.3310 (10) | 0.217 (7) | 0.593 (10) |
| Mn1 | 0.0517 (6) | 0.0556 (6) | 0.0338 (5) | 0.000 | 0.0205 (4) | 0.000 |
| N1 | 0.047 (2) | 0.054 (2) | 0.0324 (18) | −0.0002 (17) | 0.0180 (17) | −0.0028 (15) |
| N2 | 0.059 (2) | 0.058 (2) | 0.0378 (19) | −0.0088 (18) | 0.0229 (16) | 0.0011 (16) |
| N3 | 0.074 (2) | 0.084 (3) | 0.0357 (19) | −0.030 (2) | 0.0196 (19) | −0.0089 (19) |
| N4 | 0.051 (2) | 0.059 (2) | 0.0362 (18) | −0.0072 (17) | 0.0177 (17) | −0.0039 (16) |
| N5 | 0.091 (3) | 0.093 (3) | 0.046 (2) | −0.046 (3) | 0.027 (2) | −0.007 (2) |
| C1 | 0.088 (3) | 0.072 (3) | 0.054 (3) | −0.023 (3) | 0.034 (3) | −0.004 (2) |
| C2 | 0.081 (3) | 0.091 (4) | 0.053 (3) | −0.030 (3) | 0.032 (3) | −0.009 (2) |
| C3 | 0.049 (3) | 0.055 (3) | 0.042 (2) | −0.002 (2) | 0.022 (2) | −0.004 (2) |
| C4 | 0.047 (2) | 0.051 (3) | 0.034 (2) | 0.000 (2) | 0.020 (2) | −0.002 (2) |
| C5 | 0.065 (3) | 0.076 (3) | 0.035 (2) | −0.010 (3) | 0.019 (2) | −0.003 (2) |
| C6 | 0.093 (4) | 0.089 (4) | 0.039 (3) | −0.014 (3) | 0.033 (3) | 0.008 (2) |
| C7 | 0.080 (3) | 0.076 (3) | 0.040 (3) | −0.022 (3) | 0.029 (2) | −0.001 (2) |
| C8 | 0.047 (2) | 0.056 (3) | 0.043 (2) | −0.005 (2) | 0.021 (2) | −0.003 (2) |
| C9 | 0.054 (3) | 0.055 (3) | 0.040 (2) | −0.008 (2) | 0.021 (2) | −0.003 (2) |
| C10 | 0.081 (3) | 0.087 (4) | 0.058 (3) | −0.034 (3) | 0.027 (3) | −0.015 (3) |
| N6 | 0.304 (12) | 0.120 (8) | 0.196 (9) | 0.000 | 0.179 (9) | 0.000 |
| C12 | 0.163 (10) | 0.098 (8) | 0.154 (9) | 0.000 | 0.013 (7) | 0.000 |
| C13 | 0.153 (8) | 0.094 (8) | 0.124 (7) | 0.000 | 0.091 (6) | 0.000 |
| C11 | 0.062 (3) | 0.073 (3) | 0.044 (2) | −0.018 (2) | 0.017 (2) | −0.010 (2) |
| Cl1 | 0.0956 (11) | 0.0967 (12) | 0.0876 (10) | 0.0154 (9) | 0.0339 (9) | −0.0296 (9) |
| O1 | 0.165 (12) | 0.155 (13) | 0.094 (7) | 0.048 (10) | 0.056 (8) | −0.039 (7) |
| O2 | 0.077 (6) | 0.243 (16) | 0.111 (10) | 0.016 (7) | 0.038 (6) | −0.023 (10) |
| O3 | 0.105 (9) | 0.242 (16) | 0.247 (18) | −0.054 (11) | 0.079 (11) | −0.189 (15) |
| O4 | 0.31 (3) | 0.224 (15) | 0.27 (2) | 0.084 (15) | 0.17 (2) | 0.105 (15) |
| O1' | 0.134 (7) | 0.129 (7) | 0.109 (6) | 0.003 (5) | 0.017 (5) | −0.077 (6) |
| O2' | 0.211 (13) | 0.103 (5) | 0.137 (7) | 0.059 (7) | 0.118 (8) | 0.025 (5) |
| O3' | 0.110 (5) | 0.159 (9) | 0.065 (4) | −0.011 (5) | −0.004 (4) | −0.018 (4) |
| O4' | 0.320 (15) | 0.167 (10) | 0.300 (16) | −0.050 (10) | 0.256 (16) | −0.056 (9) |
| Mn1—N4 | 2.247 (3) | C5—C6 | 1.384 (5) |
| Mn1—N4i | 2.247 (3) | C5—H5 | 0.9300 |
| Mn1—N2 | 2.283 (3) | C6—C7 | 1.378 (5) |
| Mn1—N2i | 2.283 (3) | C6—H6 | 0.9300 |
| Mn1—N1 | 2.287 (3) | C7—C8 | 1.370 (5) |
| Mn1—N1i | 2.287 (3) | C7—H7 | 0.9300 |
| N1—C4 | 1.328 (4) | C8—C9 | 1.476 (5) |
| N1—C8 | 1.337 (4) | C10—C11 | 1.530 (5) |
| N2—C3 | 1.292 (4) | C10—H10A | 0.9700 |
| N2—C1 | 1.484 (5) | C10—H10B | 0.9700 |
| N3—C3 | 1.354 (5) | N6—C13 | 1.117 (10) |
| N3—C2 | 1.458 (5) | C12—C13 | 1.3547 |
| N3—H3A | 0.8600 | C12—H12B | 0.9600 |
| N4—C9 | 1.287 (4) | C12—H12A | 0.9600 |
| N4—C11 | 1.486 (4) | C12—H12C | 0.9600 |
| N5—C9 | 1.332 (4) | C11—H11A | 0.9700 |
| N5—C10 | 1.459 (5) | C11—H11B | 0.9700 |
| N5—H5A | 0.8600 | Cl1—O1' | 1.376 (5) |
| C1—C2 | 1.519 (5) | Cl1—O2' | 1.406 (5) |
| C1—H1A | 0.9700 | Cl1—O2 | 1.407 (6) |
| C1—H1B | 0.9700 | Cl1—O3' | 1.409 (5) |
| C2—H2A | 0.9700 | Cl1—O4 | 1.411 (7) |
| C2—H2B | 0.9700 | Cl1—O3 | 1.426 (7) |
| C3—C4 | 1.468 (5) | Cl1—O1 | 1.474 (7) |
| C4—C5 | 1.379 (5) | Cl1—O4' | 1.505 (6) |
| N4—Mn1—N4i | 96.14 (16) | C8—C7—H7 | 121.0 |
| N4—Mn1—N2 | 139.28 (11) | C6—C7—H7 | 121.0 |
| N4i—Mn1—N2 | 91.20 (11) | N1—C8—C7 | 121.8 (4) |
| N4—Mn1—N2i | 91.20 (11) | N1—C8—C9 | 111.6 (3) |
| N4i—Mn1—N2i | 139.28 (11) | C7—C8—C9 | 126.6 (4) |
| N2—Mn1—N2i | 108.70 (16) | N4—C9—N5 | 116.9 (3) |
| N4—Mn1—N1 | 70.18 (11) | N4—C9—C8 | 119.4 (4) |
| N4i—Mn1—N1 | 87.66 (10) | N5—C9—C8 | 123.7 (4) |
| N2—Mn1—N1 | 70.18 (12) | N5—C10—C11 | 101.3 (3) |
| N2i—Mn1—N1 | 132.10 (10) | N5—C10—H10A | 111.3 |
| N4—Mn1—N1i | 87.66 (10) | C11—C10—H10A | 110.3 |
| N4i—Mn1—N1i | 70.18 (11) | N5—C10—H10B | 112.2 |
| N2—Mn1—N1i | 132.10 (11) | C11—C10—H10B | 112.1 |
| N2i—Mn1—N1i | 70.18 (11) | H10A—C10—H10B | 109.4 |
| N1—Mn1—N1i | 146.97 (17) | C13—C12—H12B | 114.2 |
| C4—N1—C8 | 120.4 (3) | C13—C12—H12A | 103.9 |
| C4—N1—Mn1 | 119.4 (2) | H12B—C12—H12A | 114.2 |
| C8—N1—Mn1 | 119.0 (2) | C13—C12—H12C | 103.9 |
| C3—N2—C1 | 105.8 (3) | H12B—C12—H12C | 114.2 |
| C3—N2—Mn1 | 116.2 (3) | H12A—C12—H12C | 105.4 |
| C1—N2—Mn1 | 137.3 (2) | N6—C13—C12 | 180.000 (6) |
| C3—N3—C2 | 108.5 (3) | N4—C11—C10 | 106.3 (3) |
| C3—N3—H3A | 125.7 | N4—C11—H11A | 110.9 |
| C2—N3—H3A | 125.7 | C10—C11—H11A | 109.5 |
| C9—N4—C11 | 106.0 (3) | N4—C11—H11B | 110.7 |
| C9—N4—Mn1 | 118.4 (3) | C10—C11—H11B | 111.2 |
| C11—N4—Mn1 | 135.5 (2) | H11A—C11—H11B | 108.3 |
| C9—N5—C10 | 109.6 (3) | O1'—Cl1—O2' | 117.7 (5) |
| C9—N5—H5A | 125.2 | O1'—Cl1—O2 | 88.3 (5) |
| C10—N5—H5A | 125.2 | O2'—Cl1—O2 | 63.0 (5) |
| N2—C1—C2 | 106.7 (3) | O1'—Cl1—O3' | 112.1 (4) |
| N2—C1—H1A | 110.4 | O2'—Cl1—O3' | 112.2 (5) |
| C2—C1—H1A | 110.4 | O2—Cl1—O3' | 157.2 (5) |
| N2—C1—H1B | 110.4 | O1'—Cl1—O4 | 74.9 (8) |
| C2—C1—H1B | 110.4 | O2'—Cl1—O4 | 165.2 (8) |
| H1A—C1—H1B | 108.6 | O2—Cl1—O4 | 112.3 (7) |
| N3—C2—C1 | 102.0 (3) | O3'—Cl1—O4 | 66.1 (7) |
| N3—C2—H2A | 111.4 | O1'—Cl1—O3 | 157.0 (5) |
| C1—C2—H2A | 111.4 | O2'—Cl1—O3 | 61.8 (7) |
| N3—C2—H2B | 111.4 | O2—Cl1—O3 | 109.3 (6) |
| C1—C2—H2B | 111.4 | O3'—Cl1—O3 | 54.5 (6) |
| H2A—C2—H2B | 109.2 | O4—Cl1—O3 | 109.9 (7) |
| N2—C3—N3 | 116.7 (4) | O1'—Cl1—O1 | 53.6 (5) |
| N2—C3—C4 | 120.8 (3) | O2'—Cl1—O1 | 84.9 (6) |
| N3—C3—C4 | 122.5 (3) | O2—Cl1—O1 | 110.6 (6) |
| N1—C4—C5 | 121.3 (4) | O3'—Cl1—O1 | 90.5 (5) |
| N1—C4—C3 | 111.9 (3) | O4—Cl1—O1 | 109.6 (6) |
| C5—C4—C3 | 126.8 (4) | O3—Cl1—O1 | 104.9 (6) |
| C4—C5—C6 | 118.1 (4) | O1'—Cl1—O4' | 104.9 (5) |
| C4—C5—H5 | 121.0 | O2'—Cl1—O4' | 106.6 (4) |
| C6—C5—H5 | 121.0 | O2—Cl1—O4' | 61.7 (5) |
| C7—C6—C5 | 120.4 (4) | O3'—Cl1—O4' | 101.6 (5) |
| C7—C6—H6 | 119.8 | O4—Cl1—O4' | 60.8 (7) |
| C5—C6—H6 | 119.8 | O3—Cl1—O4' | 96.7 (6) |
| C8—C7—C6 | 118.0 (4) | O1—Cl1—O4' | 158.3 (6) |
| H··· | ||||
| N5—H5A···O2ii | 0.86 | 2.50 | 3.237 (12) | 144 |
| N5—H5A···O3ii | 0.86 | 2.25 | 2.942 (12) | 137 |
| N5—H5A···O2'ii | 0.86 | 2.11 | 2.965 (8) | 176 |
| N3—H3A···O4iii | 0.86 | 2.52 | 3.26 (2) | 144 |
| N3—H3A···O3'iii | 0.86 | 2.16 | 3.015 (8) | 178 |
Selected geometric parameters (Å, °)
| Mn1—N4 | 2.247 (3) |
| Mn1—N2 | 2.283 (3) |
| Mn1—N1 | 2.287 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N5—H5 | 0.86 | 2.50 | 3.237 (12) | 144 |
| N5—H5 | 0.86 | 2.25 | 2.942 (12) | 137 |
| N5—H5 | 0.86 | 2.11 | 2.965 (8) | 176 |
| N3—H3 | 0.86 | 2.52 | 3.26 (2) | 144 |
| N3—H3 | 0.86 | 2.16 | 3.015 (8) | 178 |
Symmetry codes: (ii) ; (iii) .