| Literature DB >> 21577622 |
Shao-Ming Shang, Chun-Xia Ren, Xin Wang, Lu-De Lu, Xu-Jie Yang.
Abstract
The asymmetric unit of the title compound, C(12)H(14)N(4)·2C(6)H(7)NO(3)S·2H(2)O, contains one half of a centrosymmetric 1,4-bis-(4,5-dihydro-1H-imidazol-2-yl)benzene (bib) molecule, one 4-amino-benzene-sulfonic acid molecule and one water mol-ecule. In the bib molecule, the imidazole ring adopts an envelope conformation. The benzene rings of bib and 4-aminobenzenesulfonic acid are oriented at a dihedral angle of 21.89 (4)°. In the crystal structure, inter-molecular N-H⋯O, O-H⋯N and O-H⋯O inter-actions link the mol-ecules into a three-dimensional network. Weak π-π contacts between the benzene and imidazole rings and between the benzene rings [centroid-centroid distances = 3.895 (1) and 3.833 (1) Å, respectively] may further stabilize the structure.Entities:
Year: 2009 PMID: 21577622 PMCID: PMC2969902 DOI: 10.1107/S1600536809032504
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H14N4·2C6H7NO3S·2H2O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 3721 reflections |
| θ = 2.6–26.3° | |
| µ = 0.26 mm−1 | |
| Block, yellow | |
| 0.15 × 0.12 × 0.10 mm |
| Bruker SMART CCD area-detector diffractometer | 2346 independent reflections |
| Radiation source: fine-focus sealed tube | 1856 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.1°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 11859 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| All H-atom parameters refined | |
| (Δ/σ)max < 0.001 | |
| 2346 reflections | Δρmax = 0.45 e Å−3 |
| 182 parameters | Δρmin = −0.42 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0010 (5) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.20619 (5) | 0.82812 (5) | 0.31074 (4) | 0.0423 (3) | |
| O1 | 0.29197 (15) | 0.8625 (2) | 0.26382 (13) | 0.0688 (7) | |
| O2 | 0.1875 (2) | 0.71668 (16) | 0.30647 (13) | 0.0681 (7) | |
| O3 | 0.12151 (14) | 0.88982 (15) | 0.28322 (11) | 0.0536 (5) | |
| H3A | 0.0729 | 0.8714 | 0.3104 | 0.080* | |
| O4 | −0.06007 (17) | 0.8498 (2) | 0.36193 (13) | 0.0774 (8) | |
| H4A | −0.0646 | 0.8028 | 0.4006 | 0.093* | |
| H4B | −0.1105 | 0.8846 | 0.3470 | 0.093* | |
| N1 | 0.2770 (2) | 0.9242 (2) | 0.67696 (14) | 0.0615 (8) | |
| H1A | 0.2775 | 0.8740 | 0.7140 | 0.074* | |
| H1B | 0.2884 | 0.9878 | 0.6930 | 0.074* | |
| N2 | 0.51620 (17) | 0.7721 (2) | 0.34661 (15) | 0.0518 (6) | |
| H1 | 0.5368 | 0.8180 | 0.3103 | 0.062* | |
| N3 | 0.46812 (18) | 0.70826 (19) | 0.46926 (16) | 0.0530 (6) | |
| C1 | 0.25816 (19) | 0.90302 (19) | 0.59303 (15) | 0.0384 (6) | |
| C2 | 0.2594 (2) | 0.98296 (19) | 0.53090 (16) | 0.0398 (6) | |
| H2 | 0.2705 | 1.0522 | 0.5476 | 0.048* | |
| C3 | 0.24456 (19) | 0.96036 (18) | 0.44548 (15) | 0.0368 (6) | |
| H3 | 0.2470 | 1.0141 | 0.4050 | 0.044* | |
| C4 | 0.22603 (17) | 0.85807 (18) | 0.41959 (15) | 0.0327 (5) | |
| C5 | 0.22330 (18) | 0.77832 (18) | 0.48013 (15) | 0.0362 (6) | |
| H5 | 0.2105 | 0.7095 | 0.4631 | 0.043* | |
| C6 | 0.2394 (2) | 0.80063 (19) | 0.56551 (15) | 0.0392 (6) | |
| H6 | 0.2378 | 0.7463 | 0.6055 | 0.047* | |
| C7 | 0.49343 (18) | 0.7937 (2) | 0.42682 (17) | 0.0441 (7) | |
| C8 | 0.4824 (3) | 0.6141 (3) | 0.4154 (2) | 0.0657 (9) | |
| H8A | 0.4241 | 0.5703 | 0.4149 | 0.079* | |
| H8B | 0.5377 | 0.5726 | 0.4351 | 0.079* | |
| C9 | 0.5021 (3) | 0.6610 (3) | 0.3270 (2) | 0.0604 (8) | |
| H9A | 0.5604 | 0.6307 | 0.3013 | 0.073* | |
| H9B | 0.4468 | 0.6506 | 0.2889 | 0.073* | |
| C10 | 0.49700 (19) | 0.8996 (2) | 0.46426 (16) | 0.0446 (7) | |
| C11 | 0.5064 (2) | 0.9132 (2) | 0.55335 (17) | 0.0513 (7) | |
| H11 | 0.5105 | 0.8546 | 0.5890 | 0.062* | |
| C12 | 0.4905 (2) | 0.9878 (2) | 0.41216 (17) | 0.0514 (7) | |
| H12 | 0.4839 | 0.9796 | 0.3532 | 0.062* |
| S1 | 0.0514 (5) | 0.0491 (4) | 0.0264 (4) | −0.0001 (3) | 0.0007 (3) | −0.0023 (3) |
| O1 | 0.0604 (14) | 0.1066 (17) | 0.0396 (12) | −0.0006 (13) | 0.0178 (10) | 0.0025 (11) |
| O2 | 0.114 (2) | 0.0497 (12) | 0.0407 (12) | −0.0013 (12) | −0.0076 (11) | −0.0109 (9) |
| O3 | 0.0497 (12) | 0.0712 (13) | 0.0399 (10) | −0.0024 (10) | −0.0102 (9) | 0.0053 (9) |
| O4 | 0.0590 (14) | 0.128 (2) | 0.0449 (13) | 0.0017 (14) | −0.0103 (10) | 0.0270 (13) |
| N1 | 0.097 (2) | 0.0549 (15) | 0.0321 (12) | −0.0210 (14) | −0.0048 (12) | −0.0035 (10) |
| N2 | 0.0504 (14) | 0.0678 (16) | 0.0371 (13) | −0.0018 (12) | 0.0070 (11) | 0.0087 (11) |
| N3 | 0.0438 (14) | 0.0646 (15) | 0.0507 (14) | −0.0019 (12) | 0.0108 (11) | 0.0103 (12) |
| C1 | 0.0396 (14) | 0.0445 (13) | 0.0312 (13) | −0.0052 (12) | 0.0007 (11) | −0.0021 (10) |
| C2 | 0.0468 (16) | 0.0335 (12) | 0.0390 (14) | −0.0056 (11) | 0.0020 (11) | −0.0019 (10) |
| C3 | 0.0389 (14) | 0.0360 (12) | 0.0356 (13) | 0.0004 (11) | 0.0006 (11) | 0.0053 (10) |
| C4 | 0.0317 (13) | 0.0359 (12) | 0.0304 (12) | 0.0021 (10) | 0.0005 (10) | 0.0013 (9) |
| C5 | 0.0457 (15) | 0.0315 (12) | 0.0314 (13) | −0.0014 (11) | −0.0010 (10) | −0.0005 (9) |
| C6 | 0.0466 (15) | 0.0374 (12) | 0.0335 (13) | −0.0011 (12) | −0.0016 (12) | 0.0068 (10) |
| C7 | 0.0290 (14) | 0.0668 (17) | 0.0366 (14) | 0.0049 (13) | 0.0043 (11) | 0.0116 (12) |
| C8 | 0.063 (2) | 0.071 (2) | 0.063 (2) | −0.0182 (17) | 0.0129 (16) | 0.0054 (16) |
| C9 | 0.058 (2) | 0.072 (2) | 0.0507 (18) | −0.0093 (16) | 0.0045 (15) | −0.0012 (15) |
| C10 | 0.0330 (14) | 0.0646 (17) | 0.0361 (14) | 0.0076 (13) | 0.0063 (11) | 0.0110 (12) |
| C11 | 0.0509 (17) | 0.0654 (18) | 0.0377 (15) | 0.0104 (14) | 0.0065 (12) | 0.0146 (13) |
| C12 | 0.0494 (17) | 0.0729 (19) | 0.0318 (14) | 0.0101 (15) | 0.0042 (12) | 0.0094 (13) |
| S1—O2 | 1.439 (2) | C3—C4 | 1.383 (3) |
| S1—O1 | 1.447 (2) | C3—H3 | 0.9300 |
| S1—O3 | 1.460 (2) | C4—C5 | 1.385 (3) |
| S1—C4 | 1.760 (2) | C5—C6 | 1.379 (3) |
| O3—H3A | 0.8200 | C5—H5 | 0.9300 |
| O4—H4A | 0.8501 | C6—H6 | 0.9300 |
| O4—H4B | 0.8501 | C7—C10 | 1.467 (4) |
| N1—C1 | 1.360 (3) | C8—C9 | 1.525 (4) |
| N1—H1A | 0.8600 | C8—H8A | 0.9700 |
| N1—H1B | 0.8600 | C8—H8B | 0.9700 |
| N2—C7 | 1.317 (3) | C9—H9A | 0.9700 |
| N2—C9 | 1.455 (4) | C9—H9B | 0.9700 |
| N2—H1 | 0.8600 | C10—C12 | 1.387 (4) |
| N3—C7 | 1.317 (3) | C10—C11 | 1.405 (4) |
| N3—C8 | 1.474 (4) | C11—C12i | 1.368 (4) |
| C1—C6 | 1.393 (3) | C11—H11 | 0.9300 |
| C1—C2 | 1.403 (3) | C12—C11i | 1.368 (4) |
| C2—C3 | 1.377 (3) | C12—H12 | 0.9300 |
| C2—H2 | 0.9300 | ||
| O2—S1—O1 | 114.61 (15) | C4—C5—H5 | 119.9 |
| O2—S1—O3 | 111.99 (14) | C5—C6—C1 | 121.2 (2) |
| O1—S1—O3 | 109.17 (13) | C5—C6—H6 | 119.4 |
| O2—S1—C4 | 106.51 (12) | C1—C6—H6 | 119.4 |
| O1—S1—C4 | 107.34 (13) | N3—C7—N2 | 111.6 (3) |
| O3—S1—C4 | 106.79 (11) | N3—C7—C10 | 124.3 (2) |
| S1—O3—H3A | 109.5 | N2—C7—C10 | 124.1 (2) |
| H4A—O4—H4B | 120.0 | N3—C8—C9 | 102.8 (3) |
| C1—N1—H1A | 120.0 | N3—C8—H8A | 111.2 |
| C1—N1—H1B | 120.0 | C9—C8—H8A | 111.2 |
| H1A—N1—H1B | 120.0 | N3—C8—H8B | 111.2 |
| C7—N2—C9 | 111.7 (2) | C9—C8—H8B | 111.2 |
| C7—N2—H1 | 124.2 | H8A—C8—H8B | 109.1 |
| C9—N2—H1 | 124.2 | N2—C9—C8 | 102.3 (2) |
| C7—N3—C8 | 110.3 (2) | N2—C9—H9A | 111.3 |
| N1—C1—C6 | 121.0 (2) | C8—C9—H9A | 111.3 |
| N1—C1—C2 | 121.2 (2) | N2—C9—H9B | 111.3 |
| C6—C1—C2 | 117.7 (2) | C8—C9—H9B | 111.3 |
| C3—C2—C1 | 121.0 (2) | H9A—C9—H9B | 109.2 |
| C3—C2—H2 | 119.5 | C12—C10—C11 | 119.0 (3) |
| C1—C2—H2 | 119.5 | C12—C10—C7 | 120.4 (2) |
| C2—C3—C4 | 120.3 (2) | C11—C10—C7 | 120.6 (2) |
| C2—C3—H3 | 119.8 | C12i—C11—C10 | 120.3 (3) |
| C4—C3—H3 | 119.8 | C12i—C11—H11 | 119.9 |
| C3—C4—C5 | 119.5 (2) | C10—C11—H11 | 119.9 |
| C3—C4—S1 | 120.81 (18) | C11i—C12—C10 | 120.7 (3) |
| C5—C4—S1 | 119.67 (18) | C11i—C12—H12 | 119.7 |
| C6—C5—C4 | 120.2 (2) | C10—C12—H12 | 119.7 |
| C6—C5—H5 | 119.9 |
| H··· | ||||
| O3—H3A···O4 | 0.82 | 2.00 | 2.809 (3) | 168 |
| N1—H1A···O2ii | 0.86 | 2.22 | 2.960 (3) | 145 |
| N1—H1B···O3iii | 0.86 | 2.43 | 3.200 (3) | 150 |
| N1—H1B···O1iii | 0.86 | 2.46 | 3.170 (4) | 141 |
| N2—H1···O3iv | 0.86 | 2.07 | 2.897 (3) | 161 |
| O4—H4A···N3v | 0.85 | 2.08 | 2.760 (3) | 136 |
| O4—H4B···O1vi | 0.85 | 2.20 | 2.817 (3) | 130 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3 | 0.82 | 2.00 | 2.809 (3) | 168 |
| N1—H1 | 0.86 | 2.22 | 2.960 (3) | 145 |
| N1—H1 | 0.86 | 2.43 | 3.200 (3) | 150 |
| N1—H1 | 0.86 | 2.46 | 3.170 (4) | 141 |
| N2—H1⋯O3iii | 0.86 | 2.07 | 2.897 (3) | 161 |
| O4—H4 | 0.85 | 2.08 | 2.760 (3) | 136 |
| O4—H4 | 0.85 | 2.20 | 2.817 (3) | 130 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .