| Literature DB >> 21522956 |
Xiu-Mei Song, Jun-Jun Li, Xin-Hua Liu, Chun-Xia Ren, Shao-Ming Shang.
Abstract
In the title compound, C(12)H(16)N(4) (+)·2C(7)H(4)NO(4) (-), the complete 2,2'-(p-phenyl-ene)bis-(4,5-dihydro-1H-imidazol-3-ium) (bib) dication is generated by crystallographic inversion symmetry. The bib cations reside on crystallographic inversion centers, which coincide with the centroids of the respective benzene rings. In the cation, the imidazole ring adopts an envelop conformation with the flap atom displaced by 0.082 (3) Å from the plane through the other ring atoms. In the crystal, the cations and anions are linked through inter-molecular N-H⋯O hydrogen bonds, forming chains running along the a axis. C-H⋯O inter-actions also occur. Weak π-π contacts between the imidazole rings of bib and between the benzene rings of NB [centroid-centroid distances = 3.501 (1) and 3.281 (2) Å, respectively] may further stabilize the structure.Entities:
Year: 2011 PMID: 21522956 PMCID: PMC3051745 DOI: 10.1107/S1600536810053341
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H16N42+·2C7H4NO4− | |
| Triclinic, | |
| Hall symbol: -P 1 | |
| Mo | |
| µ = 0.12 mm−1 | |
| α = 81.343 (3)° | Block, colorless |
| β = 82.443 (3)° | 0.67 × 0.55 × 0.42 mm |
| γ = 62.699 (2)° |
| Bruker SMART APEX CCD area-detector diffractometer | 2575 independent reflections |
| Radiation source: fine-focus sealed tube | 1676 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.0°, θmin = 1.6° |
| Absorption correction: multi-scan ( | |
| 3714 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2575 reflections | (Δ/σ)max < 0.001 |
| 181 parameters | Δρmax = 0.20 e Å−3 |
| 1 restraint | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.7607 (4) | 0.1903 (4) | 0.18562 (17) | 0.0483 (6) | |
| H1A | 0.7398 | 0.2592 | 0.2458 | 0.058* | |
| H1B | 0.6839 | 0.1075 | 0.1981 | 0.058* | |
| C2 | 0.6871 (4) | 0.3430 (3) | 0.09029 (18) | 0.0492 (6) | |
| H2A | 0.5961 | 0.3147 | 0.0521 | 0.059* | |
| H2B | 0.6093 | 0.4820 | 0.1083 | 0.059* | |
| C3 | 1.0544 (3) | 0.1481 (3) | 0.07401 (15) | 0.0383 (5) | |
| C4 | 1.2831 (3) | 0.0707 (3) | 0.03509 (15) | 0.0373 (5) | |
| C5 | 1.3404 (3) | 0.1420 (3) | −0.06192 (15) | 0.0414 (5) | |
| H5 | 1.2337 | 0.2373 | −0.1034 | 0.050* | |
| C6 | 1.5554 (4) | 0.0716 (3) | −0.09660 (15) | 0.0416 (5) | |
| H6 | 1.5925 | 0.1195 | −0.1615 | 0.050* | |
| C7 | 0.1900 (4) | 0.5421 (5) | 0.2448 (2) | 0.0620 (8) | |
| C8 | 0.2163 (3) | 0.3932 (3) | 0.33993 (16) | 0.0437 (5) | |
| C9 | 0.1925 (4) | 0.2191 (4) | 0.33805 (19) | 0.0529 (6) | |
| H9 | 0.1691 | 0.1887 | 0.2765 | 0.064* | |
| C10 | 0.2027 (4) | 0.0885 (4) | 0.4264 (2) | 0.0639 (7) | |
| H10 | 0.1849 | −0.0275 | 0.4239 | 0.077* | |
| C11 | 0.2391 (4) | 0.1307 (4) | 0.5170 (2) | 0.0620 (7) | |
| H11 | 0.2445 | 0.0452 | 0.5769 | 0.074* | |
| C12 | 0.2671 (3) | 0.3009 (4) | 0.51797 (16) | 0.0507 (6) | |
| C13 | 0.2561 (3) | 0.4345 (3) | 0.43168 (17) | 0.0462 (5) | |
| H13 | 0.2750 | 0.5497 | 0.4350 | 0.055* | |
| N1 | 0.8925 (3) | 0.3081 (3) | 0.03187 (14) | 0.0482 (5) | |
| H1 | 0.9055 | 0.3822 | −0.0226 | 0.058* | |
| N2 | 0.9901 (3) | 0.0671 (3) | 0.15833 (13) | 0.0438 (5) | |
| H2 | 1.0721 | −0.0439 | 0.1930 | 0.053* | |
| N3 | 0.3060 (4) | 0.3471 (5) | 0.61616 (18) | 0.0776 (8) | |
| O1 | 0.1555 (3) | 0.4959 (3) | 0.16467 (14) | 0.0884 (7) | |
| O2 | 0.2025 (3) | 0.7013 (3) | 0.25649 (18) | 0.0916 (8) | |
| O3 | 0.3241 (4) | 0.5037 (6) | 0.6153 (2) | 0.1100 (10) | |
| O4 | 0.3135 (4) | 0.2288 (5) | 0.69216 (16) | 0.1205 (11) |
| C1 | 0.0495 (13) | 0.0543 (13) | 0.0410 (12) | −0.0242 (11) | −0.0023 (10) | −0.0025 (10) |
| C2 | 0.0456 (13) | 0.0468 (12) | 0.0473 (13) | −0.0152 (10) | −0.0034 (10) | −0.0009 (10) |
| C3 | 0.0477 (12) | 0.0387 (10) | 0.0286 (10) | −0.0187 (9) | −0.0089 (9) | −0.0010 (8) |
| C4 | 0.0446 (12) | 0.0356 (10) | 0.0298 (10) | −0.0160 (9) | −0.0068 (8) | −0.0011 (8) |
| C5 | 0.0472 (12) | 0.0380 (11) | 0.0323 (11) | −0.0142 (9) | −0.0099 (9) | 0.0053 (8) |
| C6 | 0.0516 (13) | 0.0424 (11) | 0.0273 (10) | −0.0197 (10) | −0.0045 (9) | 0.0040 (8) |
| C7 | 0.0410 (13) | 0.0717 (18) | 0.0494 (16) | −0.0137 (12) | −0.0021 (11) | 0.0233 (13) |
| C8 | 0.0359 (11) | 0.0477 (12) | 0.0367 (12) | −0.0129 (9) | −0.0031 (9) | 0.0074 (9) |
| C9 | 0.0513 (14) | 0.0599 (15) | 0.0463 (14) | −0.0226 (11) | −0.0085 (11) | −0.0052 (11) |
| C10 | 0.0610 (16) | 0.0510 (14) | 0.080 (2) | −0.0292 (13) | −0.0097 (14) | 0.0104 (13) |
| C11 | 0.0513 (15) | 0.0686 (17) | 0.0530 (16) | −0.0235 (13) | −0.0059 (12) | 0.0225 (13) |
| C12 | 0.0350 (12) | 0.0701 (16) | 0.0336 (12) | −0.0131 (11) | −0.0033 (9) | −0.0013 (11) |
| C13 | 0.0362 (11) | 0.0487 (12) | 0.0484 (13) | −0.0153 (10) | −0.0014 (9) | −0.0037 (10) |
| N1 | 0.0481 (11) | 0.0478 (10) | 0.0372 (10) | −0.0146 (9) | −0.0047 (8) | 0.0072 (8) |
| N2 | 0.0464 (10) | 0.0434 (10) | 0.0365 (10) | −0.0181 (8) | −0.0060 (8) | 0.0062 (8) |
| N3 | 0.0438 (13) | 0.124 (2) | 0.0481 (14) | −0.0212 (14) | −0.0029 (10) | −0.0174 (15) |
| O1 | 0.0837 (14) | 0.1023 (16) | 0.0365 (10) | −0.0115 (12) | −0.0080 (9) | 0.0177 (10) |
| O2 | 0.0766 (14) | 0.0759 (14) | 0.1167 (19) | −0.0418 (12) | −0.0346 (12) | 0.0561 (13) |
| O3 | 0.0816 (17) | 0.173 (3) | 0.0934 (19) | −0.0593 (18) | 0.0042 (13) | −0.0671 (19) |
| O4 | 0.0984 (18) | 0.183 (3) | 0.0363 (12) | −0.0305 (18) | −0.0134 (11) | 0.0122 (15) |
| C1—N2 | 1.462 (3) | C7—O2 | 1.257 (4) |
| C1—C2 | 1.531 (3) | C7—C8 | 1.514 (3) |
| C1—H1A | 0.9700 | C8—C9 | 1.380 (3) |
| C1—H1B | 0.9700 | C8—C13 | 1.387 (3) |
| C2—N1 | 1.468 (3) | C9—C10 | 1.388 (3) |
| C2—H2A | 0.9700 | C9—H9 | 0.9300 |
| C2—H2B | 0.9700 | C10—C11 | 1.367 (4) |
| C3—N2 | 1.312 (3) | C10—H10 | 0.9300 |
| C3—N1 | 1.317 (3) | C11—C12 | 1.366 (4) |
| C3—C4 | 1.476 (3) | C11—H11 | 0.9300 |
| C4—C6i | 1.393 (3) | C12—C13 | 1.380 (3) |
| C4—C5 | 1.394 (3) | C12—N3 | 1.481 (3) |
| C5—C6 | 1.383 (3) | C13—H13 | 0.9300 |
| C5—H5 | 0.9300 | N1—H1 | 0.8600 |
| C6—C4i | 1.393 (3) | N2—H2 | 0.8600 |
| C6—H6 | 0.9300 | N3—O4 | 1.221 (3) |
| C7—O1 | 1.246 (4) | N3—O3 | 1.222 (4) |
| N2—C1—C2 | 102.53 (17) | C9—C8—C13 | 118.9 (2) |
| N2—C1—H1A | 111.3 | C9—C8—C7 | 120.8 (2) |
| C2—C1—H1A | 111.3 | C13—C8—C7 | 120.2 (2) |
| N2—C1—H1B | 111.3 | C8—C9—C10 | 121.2 (2) |
| C2—C1—H1B | 111.3 | C8—C9—H9 | 119.4 |
| H1A—C1—H1B | 109.2 | C10—C9—H9 | 119.4 |
| N1—C2—C1 | 102.37 (17) | C11—C10—C9 | 119.9 (2) |
| N1—C2—H2A | 111.3 | C11—C10—H10 | 120.1 |
| C1—C2—H2A | 111.3 | C9—C10—H10 | 120.1 |
| N1—C2—H2B | 111.3 | C12—C11—C10 | 118.7 (2) |
| C1—C2—H2B | 111.3 | C12—C11—H11 | 120.7 |
| H2A—C2—H2B | 109.2 | C10—C11—H11 | 120.7 |
| N2—C3—N1 | 111.85 (19) | C11—C12—C13 | 122.8 (2) |
| N2—C3—C4 | 122.98 (18) | C11—C12—N3 | 118.7 (2) |
| N1—C3—C4 | 125.13 (18) | C13—C12—N3 | 118.4 (3) |
| C6i—C4—C5 | 119.30 (19) | C12—C13—C8 | 118.5 (2) |
| C6i—C4—C3 | 119.93 (18) | C12—C13—H13 | 120.7 |
| C5—C4—C3 | 120.75 (18) | C8—C13—H13 | 120.7 |
| C6—C5—C4 | 120.20 (19) | C3—N1—C2 | 110.95 (18) |
| C6—C5—H5 | 119.9 | C3—N1—H1 | 124.5 |
| C4—C5—H5 | 119.9 | C2—N1—H1 | 124.5 |
| C5—C6—C4i | 120.50 (19) | C3—N2—C1 | 111.14 (17) |
| C5—C6—H6 | 119.7 | C3—N2—H2 | 124.4 |
| C4i—C6—H6 | 119.7 | C1—N2—H2 | 124.4 |
| O1—C7—O2 | 127.2 (2) | O4—N3—O3 | 124.9 (3) |
| O1—C7—C8 | 117.2 (3) | O4—N3—C12 | 117.8 (3) |
| O2—C7—C8 | 115.6 (3) | O3—N3—C12 | 117.3 (3) |
| H··· | ||||
| C6—H6···O2ii | 0.93 | 2.48 | 3.283 (3) | 144 |
| N1—H1···O1iii | 0.86 | 1.97 | 2.763 (3) | 153 |
| N2—H2···O2iv | 0.86 | 1.80 | 2.646 (3) | 166 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C6—H6⋯O2i | 0.93 | 2.48 | 3.283 (3) | 144 |
| N1—H1⋯O1ii | 0.86 | 1.97 | 2.763 (3) | 153 |
| N2—H2⋯O2iii | 0.86 | 1.80 | 2.646 (3) | 166 |
Symmetry codes: (i) ; (ii) ; (iii) .