Literature DB >> 21582584

3-[(3,5-Dichloro-anilino)carbon-yl]propionic acid.

B Thimme Gowda, Sabine Foro, B S Saraswathi, Hiromitsu Terao, Hartmut Fuess.   

Abstract

In the crystal structure of the title compound, C(10)H(9)Cl(2)NO(3), the conformations of the amide O atom and the carbonyl O atom of the acid segment are anti to the H atoms of the adjacent -CH(2) groups. The C=O and O-H bonds of the acid group are in relatively rare anti positions with respect to each other. This is an obvious consequence of the concerted effects of both the all-anti mol-ecular conformation and the intermolecular hydrogen bond donated to the amide carbonyl group. In the crystal, mol-ecules are packed into infinite chains through inter-molecular N-H⋯O and O-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21582584      PMCID: PMC2968869          DOI: 10.1107/S1600536809010319

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the effect of ring and side-chain substitutions on the structures of amide compounds, see: Gowda et al. (2009 ▶). For the packing of mol­ecules involving dimeric hydrogen-bonded association of each carboxyl group with a centrosymmetrically related neighbor, see: Jagannathan et al. (1994 ▶). For the various modes of inter­linking carboxylic acids by hydrogen bonds, see: Leiserowitz (1976 ▶).

Experimental

Crystal data

C10H9Cl2NO3 M = 262.08 Monoclinic, a = 7.350 (1) Å b = 10.318 (2) Å c = 15.031 (3) Å β = 99.44 (2)° V = 1124.5 (3) Å3 Z = 4 Cu Kα radiation μ = 5.15 mm−1 T = 299 K 0.48 × 0.30 × 0.28 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.142, T max = 0.242 4204 measured reflections 2005 independent reflections 1794 reflections with I > 2σ(I) R int = 0.111 3 standard reflections frequency: 120 min intensity decay: 1.0%

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.170 S = 1.13 2005 reflections 151 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.37 e Å−3 Δρmin = −0.54 e Å−3 Data collection: CAD-4-PC (Enraf–Nonius, 1996 ▶); cell refinement: CAD-4-PC; data reduction: REDU4 (Stoe & Cie, 1987 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809010319/cs2111sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809010319/cs2111Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H9Cl2NO3F(000) = 536
Mr = 262.08Dx = 1.548 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54180 Å
Hall symbol: -P 2ynCell parameters from 25 reflections
a = 7.350 (1) Åθ = 7.4–20.6°
b = 10.318 (2) ŵ = 5.15 mm1
c = 15.031 (3) ÅT = 299 K
β = 99.44 (2)°Prism, colourless
V = 1124.5 (3) Å30.48 × 0.30 × 0.28 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer1794 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.111
graphiteθmax = 67.1°, θmin = 5.2°
ω/2θ scansh = 0→8
Absorption correction: ψ scan (North et al., 1968)k = −12→12
Tmin = 0.142, Tmax = 0.242l = −17→17
4204 measured reflections3 standard reflections every 120 min
2005 independent reflections intensity decay: 1.0%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.170H atoms treated by a mixture of independent and constrained refinement
S = 1.13w = 1/[σ2(Fo2) + (0.0804P)2 + 0.4071P] where P = (Fo2 + 2Fc2)/3
2005 reflections(Δ/σ)max = 0.009
151 parametersΔρmax = 0.37 e Å3
1 restraintΔρmin = −0.54 e Å3
xyzUiso*/Ueq
C10.2687 (3)0.5234 (3)0.51327 (16)0.0360 (6)
C20.1971 (3)0.4036 (3)0.48363 (18)0.0390 (6)
H20.16680.38630.42230.047*
C30.1715 (4)0.3108 (3)0.54585 (19)0.0415 (6)
C40.2153 (4)0.3313 (3)0.63743 (19)0.0453 (7)
H40.19710.26760.67890.054*
C50.2872 (4)0.4502 (4)0.66443 (18)0.0453 (7)
C60.3155 (4)0.5480 (3)0.60551 (17)0.0435 (7)
H60.36420.62760.62660.052*
C70.3499 (3)0.7371 (3)0.45487 (16)0.0374 (6)
C80.3313 (4)0.8125 (3)0.36730 (17)0.0421 (7)
H8A0.39960.76850.32630.051*
H8B0.20250.81480.33950.051*
C90.4014 (4)0.9480 (3)0.38180 (17)0.0447 (7)
H9A0.53220.94510.40550.054*
H9B0.34000.98910.42680.054*
C100.3724 (4)1.0293 (3)0.29825 (18)0.0436 (7)
N10.2863 (3)0.6158 (3)0.44600 (15)0.0403 (6)
H1N0.242 (4)0.584 (4)0.387 (3)0.048*
O10.4152 (3)0.7867 (3)0.52683 (13)0.0543 (6)
O20.4186 (4)1.1531 (3)0.30787 (14)0.0622 (7)
H2O0.459 (5)1.167 (5)0.3609 (15)0.075*
O30.3114 (4)0.9893 (3)0.22424 (13)0.0620 (7)
Cl10.07961 (12)0.16217 (8)0.50728 (6)0.0580 (3)
Cl20.34909 (13)0.47994 (11)0.77952 (5)0.0696 (4)
U11U22U33U12U13U23
C10.0448 (12)0.0368 (17)0.0252 (12)0.0015 (11)0.0026 (9)0.0014 (11)
C20.0487 (13)0.0390 (17)0.0287 (12)0.0004 (12)0.0050 (10)−0.0022 (11)
C30.0490 (13)0.0379 (17)0.0382 (14)−0.0009 (12)0.0089 (10)−0.0034 (12)
C40.0589 (16)0.044 (2)0.0339 (14)−0.0048 (13)0.0098 (11)0.0050 (12)
C50.0585 (15)0.051 (2)0.0265 (13)−0.0048 (13)0.0071 (10)0.0019 (12)
C60.0590 (15)0.0454 (19)0.0254 (13)−0.0089 (13)0.0044 (10)−0.0008 (12)
C70.0463 (12)0.0401 (17)0.0242 (11)−0.0013 (12)0.0007 (9)0.0008 (11)
C80.0598 (15)0.0408 (17)0.0237 (12)−0.0014 (13)0.0007 (10)0.0025 (11)
C90.0643 (15)0.0440 (19)0.0230 (12)−0.0036 (14)−0.0009 (10)0.0038 (12)
C100.0611 (15)0.0426 (18)0.0252 (12)−0.0021 (13)0.0012 (10)0.0043 (12)
N10.0602 (12)0.0370 (15)0.0220 (10)−0.0033 (11)0.0019 (8)−0.0001 (9)
O10.0824 (13)0.0483 (15)0.0272 (10)−0.0156 (11)−0.0056 (9)0.0019 (9)
O20.1047 (17)0.0458 (15)0.0289 (11)−0.0123 (13)−0.0107 (10)0.0092 (10)
O30.1032 (17)0.0545 (16)0.0224 (10)−0.0094 (13)−0.0071 (10)0.0031 (9)
Cl10.0808 (6)0.0403 (6)0.0533 (5)−0.0134 (4)0.0127 (4)−0.0065 (3)
Cl20.1032 (7)0.0795 (8)0.0243 (4)−0.0260 (5)0.0056 (4)0.0014 (3)
C1—C21.388 (4)C7—N11.335 (4)
C1—C61.396 (4)C7—C81.516 (4)
C1—N11.411 (4)C8—C91.494 (5)
C2—C31.372 (4)C8—H8A0.97
C2—H20.93C8—H8B0.97
C3—C41.378 (4)C9—C101.496 (4)
C3—Cl11.737 (3)C9—H9A0.97
C4—C51.371 (5)C9—H9B0.97
C4—H40.93C10—O31.202 (4)
C5—C61.381 (4)C10—O21.323 (4)
C5—Cl21.742 (3)N1—H1N0.95 (4)
C6—H60.93O2—H2O0.82 (2)
C7—O11.221 (3)
C2—C1—C6120.0 (3)N1—C7—C8114.5 (2)
C2—C1—N1116.5 (2)C9—C8—C7112.0 (2)
C6—C1—N1123.5 (3)C9—C8—H8A109
C3—C2—C1119.3 (2)C7—C8—H8A109
C3—C2—H2120.3C9—C8—H8B109
C1—C2—H2120.3C7—C8—H8B109
C2—C3—C4122.6 (3)H8A—C8—H8B108
C2—C3—Cl1118.5 (2)C8—C9—C10113.8 (2)
C4—C3—Cl1118.9 (2)C8—C9—H9A109
C5—C4—C3116.7 (3)C10—C9—H9A109
C5—C4—H4121.7C8—C9—H9B109
C3—C4—H4121.7C10—C9—H9B109
C4—C5—C6123.7 (3)H9A—C9—H9B108
C4—C5—Cl2118.5 (2)O3—C10—O2118.8 (3)
C6—C5—Cl2117.8 (3)O3—C10—C9124.4 (3)
C5—C6—C1117.7 (3)O2—C10—C9116.8 (3)
C5—C6—H6121.1C7—N1—C1129.3 (2)
C1—C6—H6121.1C7—N1—H1N118 (2)
O1—C7—N1124.2 (3)C1—N1—H1N112 (2)
O1—C7—C8121.3 (3)C10—O2—H2O109 (3)
O1—C7—C8—C90.2 (4)O1—C7—N1—C14.3 (5)
N1—C7—C8—C9178.9 (2)C8—C7—N1—C1−174.4 (3)
C7—C8—C9—C10−175.5 (2)C2—C1—N1—C7180.0 (3)
C8—C9—C10—O3−5.3 (5)C6—C1—N1—C71.3 (4)
C8—C9—C10—O2175.0 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O3i0.95 (4)1.93 (4)2.857 (3)167 (3)
O2—H2O···O1ii0.82 (2)1.85 (2)2.656 (3)170 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O3i0.95 (4)1.93 (4)2.857 (3)167 (3)
O2—H2O⋯O1ii0.82 (2)1.85 (2)2.656 (3)170 (4)

Symmetry codes: (i) ; (ii) .

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