| Literature DB >> 21583439 |
B Thimme Gowda, Sabine Foro, B S Saraswathi, Hartmut Fuess.
Abstract
In the crystal structure of the title compound, C(10)H(9)Cl(2)NO(3)·H(2)O, the conformations of the amide O atom and the carbonyl O atom of the acid segment are anti to the H atoms of adjacent -CH(2) groups. In the crystal, the mol-ecules are linked into a three-dimensional network through N-H⋯O and O-H⋯O inter-molecular hydrogen bonds.Entities:
Year: 2009 PMID: 21583439 PMCID: PMC2977205 DOI: 10.1107/S1600536809024519
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H9Cl2NO3·H2O | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| θ = 4.8–20.7° | |
| µ = 4.95 mm−1 | |
| β = 104.35 (2)° | Prism, colourless |
| 0.55 × 0.50 × 0.40 mm | |
| Enraf–Nonius CAD-4 diffractometer | 2052 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 67.0°, θmin = 4.8° |
| ω/2θ scans | |
| Absorption correction: ψ scan (North | |
| 2508 measured reflections | 3 standard reflections every 120 min |
| 2129 independent reflections | intensity decay: 1.0% |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.003 | |
| 2129 reflections | Δρmax = 0.92 e Å−3 |
| 167 parameters | Δρmin = −0.69 e Å−3 |
| 5 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.014 (2) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | −0.35278 (8) | 0.10598 (12) | 0.56662 (5) | 0.0441 (4) | |
| Cl2 | −0.33021 (8) | 0.03602 (12) | 0.38996 (4) | 0.0449 (4) | |
| O1 | 0.1190 (2) | 0.2952 (3) | 0.33626 (13) | 0.0417 (6) | |
| O2 | 0.5845 (3) | 0.4233 (4) | 0.26373 (15) | 0.0534 (7) | |
| H2O | 0.674 (4) | 0.448 (6) | 0.262 (3) | 0.064* | |
| O3 | 0.6264 (3) | 0.5188 (4) | 0.38871 (15) | 0.0543 (7) | |
| N1 | 0.1755 (3) | 0.3197 (3) | 0.47092 (15) | 0.0331 (6) | |
| H1N | 0.240 (4) | 0.353 (5) | 0.511 (2) | 0.040* | |
| C1 | 0.0452 (3) | 0.2667 (4) | 0.48923 (17) | 0.0301 (7) | |
| C2 | 0.0368 (3) | 0.2923 (4) | 0.56697 (18) | 0.0345 (7) | |
| H2 | 0.1138 | 0.3446 | 0.6036 | 0.041* | |
| C3 | −0.0840 (3) | 0.2416 (4) | 0.59077 (18) | 0.0367 (7) | |
| H3 | −0.0879 | 0.2582 | 0.6435 | 0.044* | |
| C4 | −0.2005 (3) | 0.1652 (4) | 0.53626 (17) | 0.0319 (7) | |
| C5 | −0.1905 (3) | 0.1364 (4) | 0.45895 (17) | 0.0315 (7) | |
| C6 | −0.0693 (3) | 0.1877 (4) | 0.43433 (17) | 0.0325 (7) | |
| H6 | −0.0646 | 0.1696 | 0.3818 | 0.039* | |
| C7 | 0.2060 (3) | 0.3302 (4) | 0.39971 (17) | 0.0311 (7) | |
| C8 | 0.3601 (3) | 0.3889 (4) | 0.40446 (18) | 0.0360 (7) | |
| H8A | 0.3773 | 0.5034 | 0.4319 | 0.043* | |
| H8B | 0.4260 | 0.3022 | 0.4359 | 0.043* | |
| C9 | 0.3923 (4) | 0.4068 (7) | 0.3247 (2) | 0.0566 (11) | |
| H9A | 0.3294 | 0.4973 | 0.2939 | 0.068* | |
| H9B | 0.3717 | 0.2938 | 0.2963 | 0.068* | |
| C10 | 0.5465 (3) | 0.4577 (5) | 0.33053 (19) | 0.0400 (8) | |
| O4 | 0.1421 (3) | 0.9875 (5) | 0.23932 (16) | 0.0570 (8) | |
| H41 | 0.070 (4) | 0.945 (6) | 0.209 (3) | 0.068* | |
| H42 | 0.116 (5) | 1.059 (6) | 0.271 (3) | 0.068* |
| Cl1 | 0.0340 (5) | 0.0587 (6) | 0.0425 (6) | −0.0077 (3) | 0.0149 (4) | 0.0020 (3) |
| Cl2 | 0.0329 (5) | 0.0645 (7) | 0.0332 (6) | −0.0134 (3) | 0.0003 (4) | −0.0034 (3) |
| O1 | 0.0306 (11) | 0.0668 (15) | 0.0259 (11) | −0.0049 (10) | 0.0035 (9) | −0.0020 (9) |
| O2 | 0.0391 (13) | 0.0936 (19) | 0.0297 (13) | −0.0109 (13) | 0.0123 (10) | 0.0014 (12) |
| O3 | 0.0375 (13) | 0.0839 (19) | 0.0395 (14) | −0.0159 (13) | 0.0058 (11) | −0.0119 (13) |
| N1 | 0.0270 (12) | 0.0455 (14) | 0.0256 (13) | −0.0077 (10) | 0.0045 (10) | −0.0018 (10) |
| C1 | 0.0263 (13) | 0.0343 (14) | 0.0291 (15) | 0.0006 (10) | 0.0057 (11) | 0.0034 (11) |
| C2 | 0.0326 (15) | 0.0411 (15) | 0.0279 (15) | −0.0056 (12) | 0.0039 (12) | −0.0048 (11) |
| C3 | 0.0392 (16) | 0.0438 (16) | 0.0281 (15) | −0.0024 (12) | 0.0103 (12) | −0.0045 (12) |
| C4 | 0.0273 (14) | 0.0380 (14) | 0.0310 (14) | −0.0010 (11) | 0.0085 (11) | 0.0037 (11) |
| C5 | 0.0265 (14) | 0.0372 (14) | 0.0272 (14) | −0.0027 (11) | −0.0001 (11) | 0.0022 (11) |
| C6 | 0.0313 (14) | 0.0417 (16) | 0.0237 (14) | −0.0022 (11) | 0.0055 (11) | 0.0017 (11) |
| C7 | 0.0255 (14) | 0.0359 (14) | 0.0301 (14) | 0.0002 (11) | 0.0039 (11) | 0.0017 (11) |
| C8 | 0.0299 (15) | 0.0489 (17) | 0.0288 (16) | −0.0071 (12) | 0.0063 (12) | 0.0003 (12) |
| C9 | 0.0322 (18) | 0.110 (3) | 0.0274 (17) | −0.0167 (18) | 0.0062 (13) | −0.0016 (17) |
| C10 | 0.0315 (16) | 0.060 (2) | 0.0281 (15) | −0.0061 (13) | 0.0071 (12) | 0.0040 (13) |
| O4 | 0.0364 (13) | 0.094 (2) | 0.0387 (14) | −0.0004 (13) | 0.0064 (11) | −0.0163 (14) |
| Cl1—C4 | 1.723 (3) | C3—H3 | 0.93 |
| Cl2—C5 | 1.726 (3) | C4—C5 | 1.381 (4) |
| O1—C7 | 1.229 (4) | C5—C6 | 1.384 (4) |
| O2—C10 | 1.319 (4) | C6—H6 | 0.93 |
| O2—H2O | 0.88 (3) | C7—C8 | 1.520 (4) |
| O3—C10 | 1.193 (4) | C8—C9 | 1.492 (5) |
| N1—C7 | 1.337 (4) | C8—H8A | 0.97 |
| N1—C1 | 1.415 (4) | C8—H8B | 0.97 |
| N1—H1N | 0.84 (3) | C9—C10 | 1.501 (4) |
| C1—C2 | 1.380 (4) | C9—H9A | 0.97 |
| C1—C6 | 1.390 (4) | C9—H9B | 0.97 |
| C2—C3 | 1.372 (4) | O4—H41 | 0.82 (3) |
| C2—H2 | 0.93 | O4—H42 | 0.84 (3) |
| C3—C4 | 1.390 (4) | ||
| C10—O2—H2O | 118 (3) | C1—C6—H6 | 120.5 |
| C7—N1—C1 | 128.9 (2) | O1—C7—N1 | 123.8 (3) |
| C7—N1—H1N | 117 (3) | O1—C7—C8 | 122.8 (3) |
| C1—N1—H1N | 114 (3) | N1—C7—C8 | 113.4 (3) |
| C2—C1—C6 | 119.8 (3) | C9—C8—C7 | 113.3 (3) |
| C2—C1—N1 | 116.5 (3) | C9—C8—H8A | 108.9 |
| C6—C1—N1 | 123.6 (3) | C7—C8—H8A | 108.9 |
| C3—C2—C1 | 120.7 (3) | C9—C8—H8B | 108.9 |
| C3—C2—H2 | 119.6 | C7—C8—H8B | 108.9 |
| C1—C2—H2 | 119.6 | H8A—C8—H8B | 107.7 |
| C2—C3—C4 | 120.2 (3) | C8—C9—C10 | 112.6 (3) |
| C2—C3—H3 | 119.9 | C8—C9—H9A | 109.1 |
| C4—C3—H3 | 119.9 | C10—C9—H9A | 109.1 |
| C5—C4—C3 | 118.9 (3) | C8—C9—H9B | 109.1 |
| C5—C4—Cl1 | 121.4 (2) | C10—C9—H9B | 109.1 |
| C3—C4—Cl1 | 119.6 (2) | H9A—C9—H9B | 107.8 |
| C4—C5—C6 | 121.3 (3) | O3—C10—O2 | 123.7 (3) |
| C4—C5—Cl2 | 120.6 (2) | O3—C10—C9 | 124.5 (3) |
| C6—C5—Cl2 | 118.1 (2) | O2—C10—C9 | 111.8 (3) |
| C5—C6—C1 | 119.0 (3) | H41—O4—H42 | 109 (4) |
| C5—C6—H6 | 120.5 | ||
| C7—N1—C1—C2 | −171.2 (3) | C4—C5—C6—C1 | 1.2 (4) |
| C7—N1—C1—C6 | 10.6 (5) | Cl2—C5—C6—C1 | −179.2 (2) |
| C6—C1—C2—C3 | −0.3 (5) | C2—C1—C6—C5 | 0.1 (4) |
| N1—C1—C2—C3 | −178.6 (3) | N1—C1—C6—C5 | 178.3 (3) |
| C1—C2—C3—C4 | −0.8 (5) | C1—N1—C7—O1 | 1.1 (5) |
| C2—C3—C4—C5 | 2.1 (5) | C1—N1—C7—C8 | −178.6 (3) |
| C2—C3—C4—Cl1 | −178.8 (3) | O1—C7—C8—C9 | 2.4 (5) |
| C3—C4—C5—C6 | −2.3 (4) | N1—C7—C8—C9 | −177.9 (3) |
| Cl1—C4—C5—C6 | 178.6 (2) | C7—C8—C9—C10 | −177.7 (3) |
| C3—C4—C5—Cl2 | 178.1 (2) | C8—C9—C10—O3 | −16.9 (6) |
| Cl1—C4—C5—Cl2 | −1.0 (4) | C8—C9—C10—O2 | 161.8 (3) |
| H··· | ||||
| O2—H2O···O4i | 0.88 (3) | 1.79 (3) | 2.672 (4) | 177 (5) |
| N1—H1N···O3ii | 0.84 (3) | 2.11 (3) | 2.941 (4) | 168 (4) |
| O4—H41···O1iii | 0.82 (3) | 2.11 (4) | 2.894 (4) | 162 (5) |
| O4—H42···O1iv | 0.84 (3) | 2.09 (3) | 2.881 (4) | 156 (5) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2 | 0.88 (3) | 1.79 (3) | 2.672 (4) | 177 (5) |
| N1—H1 | 0.84 (3) | 2.11 (3) | 2.941 (4) | 168 (4) |
| O4—H41⋯O1iii | 0.82 (3) | 2.11 (4) | 2.894 (4) | 162 (5) |
| O4—H42⋯O1iv | 0.84 (3) | 2.09 (3) | 2.881 (4) | 156 (5) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .