Literature DB >> 21578399

N-(2,6-Dimethyl-phen-yl)maleamic acid.

B Thimme Gowda, Miroslav Tokarčík, Jozef Kožíšek, K Shakuntala, Hartmut Fuess.   

Abstract

The asymmetric unit of the title compound, C(12)H(13)NO(3), contains two independent mol-ecules. The conformation of the N-H bond and the C=O bond in the amide segment are anti to each other. The mol-ecular conformation of each mol-ecule is stabilized by an intra-molecular O-H⋯O hydrogen bond. In the crystal, mol-ecules are connected through intermolecular N-H⋯O hydrogen bonds. In addition, there is a carbon-yl-carbonyl dipolar inter-action with an O⋯C contact of 2.926 (3) Å.

Entities:  

Year:  2009        PMID: 21578399      PMCID: PMC2971056          DOI: 10.1107/S1600536809042470

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For our sudies on the effect of ring- and side-chain substitutions on the crystal structures of amides, see: Gowda et al. (2009a ▶,b ▶,c ▶); Prasad et al. (2002 ▶). For bond-length data, see: Allen et al. (1998 ▶). For modes of inter­linking carboxylic acids by hydrogen bonds, see: Leiserowitz (1976 ▶); Jagannathan et al. (1994 ▶).

Experimental

Crystal data

C12H13NO3 M = 219.23 Orthorhombic, a = 12.5268 (4) Å b = 12.9226 (4) Å c = 14.6835 (5) Å V = 2376.95 (13) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 295 K 0.56 × 0.54 × 0.48 mm

Data collection

Oxford Diffraction Xcalibur Ruby Gemini diffractometer Absorption correction: multi-scan (CrysAlis Pro; Oxford Diffraction, 2009 ▶) T min = 0.940, T max = 0.955 38472 measured reflections 2533 independent reflections 2201 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.089 S = 1.07 2533 reflections 305 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.14 e Å−3 Δρmin = −0.12 e Å−3 Data collection: CrysAlis Pro (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis Pro; data reduction: CrysAlis Pro; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2002 ▶); software used to prepare material for publication: SHELXL97, PLATON (Spek, 2009 ▶) and WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809042470/bt5099sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809042470/bt5099Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H13NO3F(000) = 928
Mr = 219.23Dx = 1.225 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 20238 reflections
a = 12.5268 (4) Åθ = 2.1–29.4°
b = 12.9226 (4) ŵ = 0.09 mm1
c = 14.6835 (5) ÅT = 295 K
V = 2376.95 (13) Å3Prism, colourless
Z = 80.56 × 0.54 × 0.48 mm
Oxford Diffraction Xcalibur Ruby Gemini diffractometer2533 independent reflections
graphite2201 reflections with I > 2σ(I)
Detector resolution: 10.434 pixels mm-1Rint = 0.025
ω scansθmax = 25.6°, θmin = 2.1°
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)h = −15→15
Tmin = 0.940, Tmax = 0.955k = −15→15
38472 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.089H atoms treated by a mixture of independent and constrained refinement
S = 1.07w = 1/[σ2(Fo2) + (0.0646P)2] where P = (Fo2 + 2Fc2)/3
2533 reflections(Δ/σ)max < 0.001
305 parametersΔρmax = 0.14 e Å3
2 restraintsΔρmin = −0.12 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.25341 (16)0.39170 (14)0.10573 (14)0.0489 (5)
C20.34832 (18)0.37146 (16)0.15245 (15)0.0570 (5)
C30.44161 (19)0.3689 (2)0.10282 (19)0.0703 (7)
H30.50570.35340.13170.084*
C40.4408 (2)0.3891 (2)0.0114 (2)0.0824 (8)
H40.50450.3875−0.02110.099*
C50.3477 (2)0.4115 (2)−0.03281 (17)0.0767 (7)
H50.34940.4271−0.09460.092*
C60.2509 (2)0.41152 (16)0.01250 (16)0.0617 (6)
C70.10578 (16)0.47012 (14)0.18861 (14)0.0486 (5)
C80.00863 (15)0.44838 (14)0.24183 (14)0.0475 (4)
H8−0.00790.37870.24930.057*
C9−0.05843 (15)0.51409 (14)0.28054 (14)0.0469 (5)
H9−0.11520.48290.31070.056*
C10−0.05898 (16)0.62944 (15)0.28426 (14)0.0483 (5)
C110.3486 (3)0.3555 (2)0.25411 (18)0.0814 (7)
H11A0.41850.33420.27340.122*
H11B0.29760.3030.26980.122*
H11C0.32990.41910.28390.122*
C120.1475 (3)0.4315 (3)−0.0362 (2)0.0929 (9)
H12A0.11690.495−0.01460.139*
H12B0.09890.3755−0.02460.139*
H12C0.16050.4365−0.10050.139*
N10.15528 (13)0.38779 (12)0.15561 (12)0.0514 (4)
H1N0.1307 (18)0.3268 (17)0.1688 (16)0.062*
O10.14060 (13)0.55904 (11)0.17420 (12)0.0726 (5)
O20.01844 (12)0.68259 (10)0.24839 (12)0.0591 (4)
H2A0.067 (2)0.640 (2)0.2168 (18)0.071*
O3−0.13208 (14)0.67180 (12)0.32315 (12)0.0728 (5)
C210.69266 (14)0.49032 (15)0.15611 (12)0.0432 (4)
C220.64858 (15)0.48672 (16)0.24349 (13)0.0500 (5)
C230.65844 (19)0.39448 (19)0.29159 (15)0.0641 (6)
H230.62920.38960.34960.077*
C240.7103 (2)0.3108 (2)0.25536 (18)0.0734 (7)
H240.71750.25040.28930.088*
C250.7512 (2)0.31594 (19)0.16950 (16)0.0676 (6)
H250.78510.25810.14530.081*
C260.74363 (16)0.40489 (16)0.11727 (14)0.0517 (5)
C270.76542 (15)0.64136 (16)0.07866 (12)0.0452 (4)
C280.73911 (15)0.73479 (15)0.02517 (12)0.0455 (4)
H280.66690.75050.02050.055*
C290.80542 (15)0.79940 (14)−0.01721 (13)0.0459 (4)
H290.77180.8548−0.04570.055*
C300.92344 (16)0.79890 (17)−0.02710 (16)0.0556 (5)
C310.5931 (2)0.5778 (2)0.28480 (16)0.0700 (6)
H31A0.56640.55930.34390.105*
H31B0.53470.59820.24650.105*
H31C0.64250.63420.29060.105*
C320.7872 (2)0.4054 (2)0.02141 (17)0.0750 (7)
H32A0.85460.44080.02050.112*
H32B0.73790.4403−0.01810.112*
H32C0.79690.33550.00090.112*
N20.68287 (12)0.58427 (13)0.10535 (11)0.0455 (4)
H2N0.6232 (16)0.6091 (17)0.0914 (15)0.055*
O40.85813 (11)0.61612 (13)0.09830 (11)0.0665 (4)
O50.96486 (13)0.85754 (14)−0.08053 (13)0.0768 (5)
O60.98128 (12)0.73556 (19)0.02073 (15)0.0970 (8)
H6A0.944 (3)0.685 (3)0.057 (3)0.116*
U11U22U33U12U13U23
C10.0508 (11)0.0374 (9)0.0585 (11)−0.0027 (9)0.0129 (10)−0.0054 (9)
C20.0592 (12)0.0494 (12)0.0623 (12)−0.0093 (10)0.0059 (11)−0.0118 (10)
C30.0507 (12)0.0769 (16)0.0835 (17)−0.0117 (12)0.0087 (12)−0.0201 (14)
C40.0672 (16)0.0939 (19)0.0861 (19)−0.0245 (15)0.0330 (15)−0.0243 (16)
C50.0903 (19)0.0815 (17)0.0581 (13)−0.0216 (15)0.0227 (14)−0.0082 (12)
C60.0706 (14)0.0523 (12)0.0622 (13)−0.0056 (11)0.0079 (12)−0.0023 (10)
C70.0476 (11)0.0342 (10)0.0641 (12)−0.0011 (9)0.0063 (9)0.0024 (9)
C80.0450 (10)0.0319 (9)0.0654 (11)−0.0024 (8)0.0027 (9)0.0004 (9)
C90.0408 (10)0.0411 (10)0.0587 (11)−0.0007 (8)0.0003 (9)0.0018 (9)
C100.0509 (11)0.0404 (10)0.0536 (11)0.0064 (10)−0.0065 (10)−0.0059 (9)
C110.0836 (17)0.0905 (18)0.0702 (15)0.0041 (15)−0.0008 (14)−0.0064 (14)
C120.096 (2)0.107 (2)0.0757 (17)0.0050 (18)−0.0048 (17)0.0136 (16)
N10.0520 (9)0.0336 (8)0.0688 (10)−0.0028 (7)0.0148 (8)0.0015 (8)
O10.0681 (10)0.0378 (7)0.1120 (13)−0.0057 (7)0.0323 (10)0.0003 (8)
O20.0579 (9)0.0351 (7)0.0843 (10)−0.0007 (7)0.0032 (8)−0.0074 (7)
O30.0757 (11)0.0502 (8)0.0924 (12)0.0134 (8)0.0203 (10)−0.0100 (8)
C210.0318 (8)0.0537 (11)0.0440 (9)−0.0060 (8)−0.0052 (8)0.0082 (8)
C220.0418 (10)0.0618 (12)0.0464 (10)−0.0055 (9)−0.0012 (9)0.0078 (9)
C230.0655 (14)0.0739 (14)0.0528 (11)−0.0056 (13)−0.0001 (11)0.0197 (11)
C240.0832 (17)0.0629 (14)0.0742 (15)0.0040 (13)−0.0054 (14)0.0225 (13)
C250.0729 (14)0.0562 (12)0.0738 (14)0.0096 (12)−0.0027 (14)0.0035 (11)
C260.0468 (10)0.0558 (11)0.0525 (10)−0.0011 (10)−0.0035 (9)0.0008 (9)
C270.0366 (10)0.0582 (11)0.0407 (9)−0.0030 (9)−0.0040 (8)0.0062 (8)
C280.0344 (9)0.0538 (11)0.0484 (10)0.0008 (9)0.0007 (9)0.0040 (9)
C290.0424 (9)0.0460 (10)0.0494 (10)−0.0002 (8)0.0023 (9)0.0035 (9)
C300.0449 (11)0.0578 (12)0.0643 (12)−0.0118 (10)0.0003 (10)0.0091 (11)
C310.0711 (14)0.0823 (16)0.0565 (12)0.0068 (13)0.0147 (11)0.0056 (12)
C320.0820 (17)0.0803 (16)0.0626 (13)0.0058 (14)0.0126 (13)−0.0049 (13)
N20.0311 (7)0.0567 (10)0.0486 (8)0.0000 (7)0.0006 (7)0.0115 (8)
O40.0365 (7)0.0845 (11)0.0784 (10)−0.0085 (8)−0.0110 (7)0.0377 (9)
O50.0529 (9)0.0795 (11)0.0979 (13)−0.0113 (8)0.0134 (8)0.0336 (10)
O60.0379 (8)0.1251 (17)0.1281 (16)−0.0123 (10)−0.0069 (9)0.0741 (15)
C1—C61.393 (3)C21—C261.397 (3)
C1—C21.397 (3)C21—C221.398 (3)
C1—N11.432 (3)C21—N21.430 (2)
C2—C31.378 (3)C22—C231.391 (3)
C2—C111.507 (4)C22—C311.495 (3)
C3—C41.368 (4)C23—C241.369 (4)
C3—H30.93C23—H230.93
C4—C51.365 (4)C24—C251.362 (4)
C4—H40.93C24—H240.93
C5—C61.383 (4)C25—C261.385 (3)
C5—H50.93C25—H250.93
C6—C121.502 (4)C26—C321.510 (3)
C7—O11.247 (2)C27—O41.240 (2)
C7—N11.323 (3)C27—N21.329 (2)
C7—C81.473 (3)C27—C281.478 (3)
C8—C91.323 (3)C28—C291.332 (3)
C8—H80.93C28—H280.93
C9—C101.492 (3)C29—C301.486 (3)
C9—H90.93C29—H290.93
C10—O31.210 (2)C30—O51.208 (2)
C10—O21.300 (3)C30—O61.299 (3)
C11—H11A0.96C31—H31A0.96
C11—H11B0.96C31—H31B0.96
C11—H11C0.96C31—H31C0.96
C12—H12A0.96C32—H32A0.96
C12—H12B0.96C32—H32B0.96
C12—H12C0.96C32—H32C0.96
N1—H1N0.87 (2)N2—H2N0.839 (19)
O2—H2A0.94 (3)O6—H6A0.96 (4)
C6—C1—C2122.42 (19)C26—C21—C22121.93 (17)
C6—C1—N1119.32 (19)C26—C21—N2119.83 (16)
C2—C1—N1118.21 (18)C22—C21—N2118.22 (18)
C3—C2—C1117.8 (2)C23—C22—C21117.4 (2)
C3—C2—C11121.3 (2)C23—C22—C31120.63 (18)
C1—C2—C11120.9 (2)C21—C22—C31122.01 (18)
C4—C3—C2120.5 (3)C24—C23—C22121.5 (2)
C4—C3—H3119.7C24—C23—H23119.3
C2—C3—H3119.7C22—C23—H23119.3
C5—C4—C3120.9 (2)C25—C24—C23119.9 (2)
C5—C4—H4119.5C25—C24—H24120
C3—C4—H4119.5C23—C24—H24120
C4—C5—C6121.3 (2)C24—C25—C26121.8 (2)
C4—C5—H5119.3C24—C25—H25119.1
C6—C5—H5119.3C26—C25—H25119.1
C5—C6—C1116.9 (2)C25—C26—C21117.45 (19)
C5—C6—C12121.8 (2)C25—C26—C32119.7 (2)
C1—C6—C12121.3 (2)C21—C26—C32122.85 (19)
O1—C7—N1120.98 (18)O4—C27—N2120.93 (17)
O1—C7—C8123.68 (17)O4—C27—C28123.18 (17)
N1—C7—C8115.34 (16)N2—C27—C28115.89 (16)
C9—C8—C7129.05 (17)C29—C28—C27128.42 (18)
C9—C8—H8115.5C29—C28—H28115.8
C7—C8—H8115.5C27—C28—H28115.8
C8—C9—C10131.31 (19)C28—C29—C30131.57 (18)
C8—C9—H9114.3C28—C29—H29114.2
C10—C9—H9114.3C30—C29—H29114.2
O3—C10—O2121.11 (18)O5—C30—O6120.45 (19)
O3—C10—C9118.2 (2)O5—C30—C29119.2 (2)
O2—C10—C9120.65 (18)O6—C30—C29120.32 (19)
C2—C11—H11A109.5C22—C31—H31A109.5
C2—C11—H11B109.5C22—C31—H31B109.5
H11A—C11—H11B109.5H31A—C31—H31B109.5
C2—C11—H11C109.5C22—C31—H31C109.5
H11A—C11—H11C109.5H31A—C31—H31C109.5
H11B—C11—H11C109.5H31B—C31—H31C109.5
C6—C12—H12A109.5C26—C32—H32A109.5
C6—C12—H12B109.5C26—C32—H32B109.5
H12A—C12—H12B109.5H32A—C32—H32B109.5
C6—C12—H12C109.5C26—C32—H32C109.5
H12A—C12—H12C109.5H32A—C32—H32C109.5
H12B—C12—H12C109.5H32B—C32—H32C109.5
C7—N1—C1124.14 (16)C27—N2—C21123.92 (16)
C7—N1—H1N118.8 (16)C27—N2—H2N114.2 (16)
C1—N1—H1N116.8 (15)C21—N2—H2N121.9 (16)
C10—O2—H2A111.5 (15)C30—O6—H6A117 (2)
C6—C1—C2—C3−1.6 (3)C26—C21—C22—C230.8 (3)
N1—C1—C2—C3175.98 (19)N2—C21—C22—C23179.67 (18)
C6—C1—C2—C11177.0 (2)C26—C21—C22—C31−179.38 (19)
N1—C1—C2—C11−5.4 (3)N2—C21—C22—C31−0.5 (3)
C1—C2—C3—C42.1 (3)C21—C22—C23—C240.7 (3)
C11—C2—C3—C4−176.5 (3)C31—C22—C23—C24−179.1 (2)
C2—C3—C4—C5−0.4 (4)C22—C23—C24—C25−1.7 (4)
C3—C4—C5—C6−2.0 (4)C23—C24—C25—C261.1 (4)
C4—C5—C6—C12.5 (4)C24—C25—C26—C210.3 (4)
C4—C5—C6—C12−177.3 (3)C24—C25—C26—C32−178.1 (2)
C2—C1—C6—C5−0.7 (3)C22—C21—C26—C25−1.3 (3)
N1—C1—C6—C5−178.2 (2)N2—C21—C26—C25179.84 (18)
C2—C1—C6—C12179.1 (2)C22—C21—C26—C32177.0 (2)
N1—C1—C6—C121.5 (3)N2—C21—C26—C32−1.8 (3)
O1—C7—C8—C91.8 (4)O4—C27—C28—C297.2 (3)
N1—C7—C8—C9−177.9 (2)N2—C27—C28—C29−172.82 (19)
C7—C8—C9—C10−0.4 (4)C27—C28—C29—C301.7 (4)
C8—C9—C10—O3178.4 (2)C28—C29—C30—O5168.9 (2)
C8—C9—C10—O2−3.2 (3)C28—C29—C30—O6−10.7 (4)
O1—C7—N1—C13.2 (3)O4—C27—N2—C21−1.2 (3)
C8—C7—N1—C1−177.03 (18)C28—C27—N2—C21178.79 (17)
C6—C1—N1—C7−84.2 (3)C26—C21—N2—C27−64.1 (3)
C2—C1—N1—C798.2 (2)C22—C21—N2—C27117.1 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O3i0.87 (2)2.01 (2)2.824 (2)156 (2)
N2—H2N···O5ii0.84 (2)2.04 (2)2.856 (2)166 (2)
O2—H2A···O10.94 (3)1.53 (3)2.465 (2)173 (2)
O6—H6A···O40.96 (4)1.52 (4)2.462 (2)163 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O3i0.87 (2)2.01 (2)2.824 (2)156 (2)
N2—H2N⋯O5ii0.839 (19)2.04 (2)2.856 (2)166 (2)
O2—H2A⋯O10.94 (3)1.53 (3)2.465 (2)173 (2)
O6—H6A⋯O40.96 (4)1.52 (4)2.462 (2)163 (4)

Symmetry codes: (i) ; (ii) .

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3.  N-(2,4,6-Trimethyl-phen-yl)succinamic acid.

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  5 in total
  6 in total

1.  N-(2,5-Dichloro-phen-yl)maleamic acid.

Authors:  K Shakuntala; B Thimme Gowda; Miroslav Tokarčík; Jozef Kožíšek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-18

2.  N-(3,4-Dimethyl-phen-yl)maleamic acid.

Authors:  B Thimme Gowda; Miroslav Tokarčík; Jozef Kožíšek; K Shakuntala; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-28

3.  N-(2,4,6-Trimethyl-phen-yl)maleamic acid.

Authors:  B Thimme Gowda; Miroslav Tokarčík; Jozef Kožíšek; K Shakuntala; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-31

4.  N-(2-Methyl-phen-yl)maleamic acid.

Authors:  B Thimme Gowda; Miroslav Tokarčík; K Shakuntala; Jozef Kožíšek; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-05

5.  N-(4-Meth-oxy-phen-yl)maleamic acid.

Authors:  B Thimme Gowda; Miroslav Tokarčík; K Shakuntala; Jozef Kožíšek; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-05

6.  (Z)-3-(Benzyl-carbamo-yl)prop-2-enoic acid.

Authors:  Su-Lan Dong; Xiao-Chun Cheng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-23
  6 in total

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