| Literature DB >> 21583718 |
B Thimme Gowda, Sabine Foro, B S Saraswathi, Hartmut Fuess.
Abstract
The amide bond in the title compound {systematic name: 3-[(2,4,6-trimethyl-phen-yl)amino-carbon-yl]propionic acid}, C(13)H(17)NO(3), has a trans conformation. In the crystal, two mol-ecules form a centrosymmetric dimer connected by pairs of O-H⋯O hydrogen bonds. Inter-molecular N-H⋯O hydrogen bonds link the dimers into a three dimensional network.Entities:
Year: 2009 PMID: 21583718 PMCID: PMC2977192 DOI: 10.1107/S1600536809029791
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H17NO3 | |
| Triclinic, | |
| Hall symbol: -P 1 | Cu |
| Cell parameters from 25 reflections | |
| θ = 4.4–22.9° | |
| µ = 0.72 mm−1 | |
| α = 70.217 (8)° | |
| β = 86.158 (8)° | Plate, colourless |
| γ = 79.351 (8)° | 0.55 × 0.25 × 0.08 mm |
| Enraf–Nonius CAD-4 diffractometer | 1918 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 67.0°, θmin = 3.6° |
| ω/2θ scans | |
| Absorption correction: ψ scan (North | |
| 3109 measured reflections | 3 standard reflections every 120 min |
| 2234 independent reflections | intensity decay: 1.0% |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.004 | |
| 2234 reflections | Δρmax = 0.30 e Å−3 |
| 182 parameters | Δρmin = −0.30 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.016 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.3669 (3) | 0.77823 (17) | 0.30593 (13) | 0.0376 (4) | |
| C2 | 0.5805 (4) | 0.67491 (18) | 0.36121 (15) | 0.0452 (4) | |
| C3 | 0.6582 (5) | 0.6700 (2) | 0.46280 (16) | 0.0549 (5) | |
| H3 | 0.804 (5) | 0.598 (2) | 0.5015 (19) | 0.066* | |
| C4 | 0.5306 (4) | 0.7610 (2) | 0.51124 (15) | 0.0512 (5) | |
| C5 | 0.3135 (4) | 0.8597 (2) | 0.45520 (15) | 0.0469 (5) | |
| H5 | 0.225 (5) | 0.923 (2) | 0.4870 (18) | 0.056* | |
| C6 | 0.2278 (3) | 0.87030 (18) | 0.35308 (14) | 0.0400 (4) | |
| C7 | 0.4594 (3) | 0.81334 (16) | 0.11383 (13) | 0.0368 (4) | |
| C8 | 0.3304 (4) | 0.8203 (2) | 0.00956 (15) | 0.0494 (5) | |
| H8A | 0.214 (5) | 0.912 (2) | −0.0210 (18) | 0.059* | |
| H8B | 0.205 (5) | 0.749 (2) | 0.0314 (18) | 0.059* | |
| C9 | 0.5540 (4) | 0.8015 (2) | −0.07431 (16) | 0.0543 (5) | |
| H9A | 0.683 (5) | 0.867 (2) | −0.0887 (19) | 0.065* | |
| H9B | 0.474 (5) | 0.815 (2) | −0.142 (2) | 0.065* | |
| C10 | 0.7408 (4) | 0.6682 (2) | −0.04148 (15) | 0.0479 (5) | |
| C11 | 0.7206 (5) | 0.5687 (2) | 0.31581 (18) | 0.0607 (6) | |
| H11A | 0.8884 | 0.5946 | 0.2757 | 0.073* | |
| H11B | 0.5898 | 0.5570 | 0.2686 | 0.073* | |
| H11C | 0.7730 | 0.4868 | 0.3741 | 0.073* | |
| C12 | 0.6208 (6) | 0.7531 (3) | 0.62154 (18) | 0.0727 (7) | |
| H12A | 0.8203 | 0.7163 | 0.6316 | 0.087* | |
| H12B | 0.5120 | 0.6975 | 0.6763 | 0.087* | |
| H12C | 0.5875 | 0.8406 | 0.6270 | 0.087* | |
| C13 | −0.0127 (4) | 0.9782 (2) | 0.29629 (16) | 0.0508 (5) | |
| H13A | −0.1896 | 0.9451 | 0.3122 | 0.061* | |
| H13B | 0.0210 | 1.0057 | 0.2195 | 0.061* | |
| H13C | −0.0227 | 1.0527 | 0.3210 | 0.061* | |
| N1 | 0.2852 (3) | 0.78867 (15) | 0.20030 (11) | 0.0396 (4) | |
| H1N | 0.108 (5) | 0.790 (2) | 0.1887 (16) | 0.047* | |
| O1 | 0.7050 (2) | 0.83144 (14) | 0.11738 (10) | 0.0497 (4) | |
| O2 | 0.9467 (3) | 0.65764 (18) | −0.11116 (13) | 0.0680 (5) | |
| H2O | 1.049 (6) | 0.577 (3) | −0.091 (2) | 0.082* | |
| O3 | 0.7089 (3) | 0.57886 (15) | 0.04196 (13) | 0.0631 (4) |
| C1 | 0.0274 (8) | 0.0490 (9) | 0.0385 (9) | −0.0093 (7) | 0.0005 (6) | −0.0158 (7) |
| C2 | 0.0415 (9) | 0.0474 (9) | 0.0448 (9) | −0.0008 (8) | −0.0037 (7) | −0.0159 (8) |
| C3 | 0.0538 (12) | 0.0562 (11) | 0.0483 (11) | 0.0068 (9) | −0.0139 (9) | −0.0151 (9) |
| C4 | 0.0503 (11) | 0.0610 (11) | 0.0425 (10) | −0.0052 (9) | −0.0069 (8) | −0.0188 (8) |
| C5 | 0.0424 (10) | 0.0570 (11) | 0.0450 (10) | −0.0039 (8) | 0.0014 (8) | −0.0244 (9) |
| C6 | 0.0280 (8) | 0.0502 (10) | 0.0417 (9) | −0.0060 (7) | 0.0020 (6) | −0.0159 (7) |
| C7 | 0.0226 (8) | 0.0466 (9) | 0.0426 (9) | −0.0003 (6) | −0.0025 (6) | −0.0190 (7) |
| C8 | 0.0281 (9) | 0.0769 (13) | 0.0448 (10) | 0.0025 (9) | −0.0051 (7) | −0.0273 (9) |
| C9 | 0.0417 (10) | 0.0776 (14) | 0.0417 (10) | 0.0032 (9) | −0.0022 (8) | −0.0241 (9) |
| C10 | 0.0373 (9) | 0.0713 (12) | 0.0450 (10) | −0.0081 (8) | 0.0019 (7) | −0.0332 (10) |
| C11 | 0.0688 (14) | 0.0530 (11) | 0.0553 (12) | 0.0092 (10) | −0.0086 (10) | −0.0202 (9) |
| C12 | 0.0836 (17) | 0.0828 (16) | 0.0519 (12) | 0.0025 (13) | −0.0207 (11) | −0.0276 (11) |
| C13 | 0.0356 (10) | 0.0627 (12) | 0.0517 (10) | 0.0049 (8) | −0.0025 (8) | −0.0226 (9) |
| N1 | 0.0213 (7) | 0.0588 (9) | 0.0420 (8) | −0.0074 (6) | −0.0022 (6) | −0.0206 (7) |
| O1 | 0.0221 (6) | 0.0789 (9) | 0.0516 (7) | −0.0109 (6) | −0.0004 (5) | −0.0249 (7) |
| O2 | 0.0600 (10) | 0.0758 (10) | 0.0631 (9) | 0.0032 (8) | 0.0198 (7) | −0.0280 (8) |
| O3 | 0.0569 (9) | 0.0678 (9) | 0.0624 (9) | −0.0033 (7) | 0.0161 (7) | −0.0256 (8) |
| C1—C6 | 1.393 (2) | C8—H8B | 1.02 (2) |
| C1—C2 | 1.395 (2) | C9—C10 | 1.491 (3) |
| C1—N1 | 1.426 (2) | C9—H9A | 0.99 (3) |
| C2—C3 | 1.387 (3) | C9—H9B | 0.94 (3) |
| C2—C11 | 1.502 (3) | C10—O3 | 1.215 (2) |
| C3—C4 | 1.378 (3) | C10—O2 | 1.311 (2) |
| C3—H3 | 0.96 (2) | C11—H11A | 0.9600 |
| C4—C5 | 1.385 (3) | C11—H11B | 0.9600 |
| C4—C12 | 1.507 (3) | C11—H11C | 0.9600 |
| C5—C6 | 1.387 (2) | C12—H12A | 0.9600 |
| C5—H5 | 0.94 (2) | C12—H12B | 0.9600 |
| C6—C13 | 1.506 (2) | C12—H12C | 0.9600 |
| C7—O1 | 1.228 (2) | C13—H13A | 0.9600 |
| C7—N1 | 1.341 (2) | C13—H13B | 0.9600 |
| C7—C8 | 1.509 (2) | C13—H13C | 0.9600 |
| C8—C9 | 1.517 (3) | N1—H1N | 0.86 (2) |
| C8—H8A | 1.01 (2) | O2—H2O | 0.88 (3) |
| C6—C1—C2 | 121.06 (15) | C8—C9—H9A | 110.4 (14) |
| C6—C1—N1 | 119.24 (15) | C10—C9—H9B | 107.1 (14) |
| C2—C1—N1 | 119.69 (15) | C8—C9—H9B | 112.8 (15) |
| C3—C2—C1 | 117.88 (17) | H9A—C9—H9B | 106 (2) |
| C3—C2—C11 | 119.76 (17) | O3—C10—O2 | 123.15 (19) |
| C1—C2—C11 | 122.34 (17) | O3—C10—C9 | 123.67 (17) |
| C4—C3—C2 | 122.86 (18) | O2—C10—C9 | 113.17 (18) |
| C4—C3—H3 | 119.0 (14) | C2—C11—H11A | 109.5 |
| C2—C3—H3 | 118.1 (14) | C2—C11—H11B | 109.5 |
| C3—C4—C5 | 117.53 (17) | H11A—C11—H11B | 109.5 |
| C3—C4—C12 | 121.54 (19) | C2—C11—H11C | 109.5 |
| C5—C4—C12 | 120.93 (19) | H11A—C11—H11C | 109.5 |
| C4—C5—C6 | 122.27 (17) | H11B—C11—H11C | 109.5 |
| C4—C5—H5 | 118.5 (14) | C4—C12—H12A | 109.5 |
| C6—C5—H5 | 119.2 (14) | C4—C12—H12B | 109.5 |
| C5—C6—C1 | 118.35 (16) | H12A—C12—H12B | 109.5 |
| C5—C6—C13 | 120.18 (16) | C4—C12—H12C | 109.5 |
| C1—C6—C13 | 121.46 (15) | H12A—C12—H12C | 109.5 |
| O1—C7—N1 | 123.22 (15) | H12B—C12—H12C | 109.5 |
| O1—C7—C8 | 121.66 (15) | C6—C13—H13A | 109.5 |
| N1—C7—C8 | 115.11 (14) | C6—C13—H13B | 109.5 |
| C7—C8—C9 | 112.74 (15) | H13A—C13—H13B | 109.5 |
| C7—C8—H8A | 106.9 (13) | C6—C13—H13C | 109.5 |
| C9—C8—H8A | 107.8 (13) | H13A—C13—H13C | 109.5 |
| C7—C8—H8B | 105.4 (13) | H13B—C13—H13C | 109.5 |
| C9—C8—H8B | 112.3 (13) | C7—N1—C1 | 123.64 (14) |
| H8A—C8—H8B | 111.7 (18) | C7—N1—H1N | 117.1 (14) |
| C10—C9—C8 | 114.18 (18) | C1—N1—H1N | 118.7 (14) |
| C10—C9—H9A | 106.1 (14) | C10—O2—H2O | 111.1 (18) |
| C6—C1—C2—C3 | −2.6 (3) | N1—C1—C6—C5 | −179.01 (15) |
| N1—C1—C2—C3 | 178.60 (16) | C2—C1—C6—C13 | −177.02 (16) |
| C6—C1—C2—C11 | 175.73 (18) | N1—C1—C6—C13 | 1.8 (2) |
| N1—C1—C2—C11 | −3.1 (3) | O1—C7—C8—C9 | 20.7 (3) |
| C1—C2—C3—C4 | 1.1 (3) | N1—C7—C8—C9 | −160.51 (18) |
| C11—C2—C3—C4 | −177.3 (2) | C7—C8—C9—C10 | 63.5 (3) |
| C2—C3—C4—C5 | 0.9 (3) | C8—C9—C10—O3 | 4.2 (3) |
| C2—C3—C4—C12 | −179.8 (2) | C8—C9—C10—O2 | −174.88 (17) |
| C3—C4—C5—C6 | −1.3 (3) | O1—C7—N1—C1 | −1.2 (3) |
| C12—C4—C5—C6 | 179.3 (2) | C8—C7—N1—C1 | 179.97 (16) |
| C4—C5—C6—C1 | −0.2 (3) | C6—C1—N1—C7 | 116.28 (19) |
| C4—C5—C6—C13 | 179.05 (18) | C2—C1—N1—C7 | −64.9 (2) |
| C2—C1—C6—C5 | 2.2 (3) |
| H··· | ||||
| N1—H1N···O1i | 0.86 (2) | 2.10 (2) | 2.9368 (18) | 163.6 (19) |
| O2—H2O···O3ii | 0.88 (3) | 1.80 (3) | 2.679 (2) | 172 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 (2) | 2.10 (2) | 2.9368 (18) | 163.6 (19) |
| O2—H2 | 0.88 (3) | 1.80 (3) | 2.679 (2) | 172 (3) |
Symmetry codes: (i) ; (ii) .