Literature DB >> 21581576

2-Phenoxy-pyrimidine.

Nasir Shah Bakhtiar1, Zanariah Abdullah, Seik Weng Ng.   

Abstract

There are two molecules in the asymmetric unit of, C(10)H(8)N(2)O, with dihedral angles between the aromatic ring planes of 75.9 (1) and 79.3 (1)°.

Entities:  

Year:  2008        PMID: 21581576      PMCID: PMC2968036          DOI: 10.1107/S1600536808041196

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For other phen­oxy-substituted N-heterocycles, see: Abdullah & Ng (2008 ▶); Hassan et al. (2008 ▶); Idris et al. (2009 ▶).

Experimental

Crystal data

C10H8N2O M = 172.18 Monoclinic, a = 10.859 (1) Å b = 20.181 (2) Å c = 8.1339 (8) Å β = 106.637 (2)° V = 1707.8 (3) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 100 (2) K 0.25 × 0.20 × 0.15 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: none 9752 measured reflections 3901 independent reflections 3026 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.102 S = 1.03 3901 reflections 235 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808041196/tk2342sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808041196/tk2342Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H8N2OF(000) = 720
Mr = 172.18Dx = 1.339 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2782 reflections
a = 10.859 (1) Åθ = 2.2–28.2°
b = 20.181 (2) ŵ = 0.09 mm1
c = 8.1339 (8) ÅT = 100 K
β = 106.637 (2)°Block, colorless
V = 1707.8 (3) Å30.25 × 0.20 × 0.15 mm
Z = 8
Bruker SMART APEX diffractometer3026 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.024
graphiteθmax = 27.5°, θmin = 2.0°
ω scansh = −11→14
9752 measured reflectionsk = −26→26
3901 independent reflectionsl = −10→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.102H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0497P)2 + 0.2571P] where P = (Fo2 + 2Fc2)/3
3901 reflections(Δ/σ)max = 0.001
235 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.22 e Å3
xyzUiso*/Ueq
O10.69295 (8)0.58216 (5)0.51546 (11)0.0274 (2)
O20.97744 (9)0.67233 (5)0.77250 (11)0.0281 (2)
N10.59037 (10)0.60351 (5)0.72195 (13)0.0245 (2)
N20.77301 (10)0.53229 (5)0.76936 (14)0.0253 (2)
N31.05326 (11)0.62385 (5)1.03911 (13)0.0264 (3)
N40.87443 (10)0.69812 (5)0.96601 (13)0.0247 (2)
C10.59965 (12)0.62116 (6)0.40077 (16)0.0213 (3)
C20.48239 (12)0.59386 (6)0.31580 (17)0.0256 (3)
H20.46170.55000.34080.031*
C30.39513 (13)0.63124 (7)0.19343 (18)0.0297 (3)
H30.31360.61330.13460.036*
C40.42700 (14)0.69480 (7)0.15706 (17)0.0311 (3)
H40.36710.72040.07290.037*
C50.54526 (14)0.72141 (6)0.24218 (18)0.0314 (3)
H15A0.56660.76500.21610.038*
C60.63298 (13)0.68443 (6)0.36592 (17)0.0263 (3)
H6B0.71440.70240.42540.032*
C70.68331 (12)0.57302 (6)0.67684 (16)0.0208 (3)
C80.58755 (14)0.59106 (7)0.88258 (17)0.0303 (3)
H80.52270.61150.92250.036*
C90.67458 (14)0.54993 (7)0.99239 (17)0.0295 (3)
H90.67110.54161.10590.035*
C100.76711 (13)0.52151 (6)0.92888 (17)0.0267 (3)
H100.82910.49311.00150.032*
C111.07433 (12)0.63814 (6)0.72453 (15)0.0235 (3)
C121.05906 (12)0.57148 (6)0.68472 (15)0.0235 (3)
H120.98590.54800.69540.028*
C131.15275 (12)0.53963 (6)0.62894 (15)0.0239 (3)
H131.14390.49390.60070.029*
C141.25931 (13)0.57413 (7)0.61407 (16)0.0258 (3)
H141.32390.55180.57730.031*
C151.27177 (13)0.64082 (7)0.65256 (18)0.0298 (3)
H151.34450.66440.64090.036*
C161.17853 (13)0.67363 (6)0.70825 (17)0.0284 (3)
H161.18650.71960.73450.034*
C170.96950 (12)0.66360 (6)0.93451 (15)0.0214 (3)
C181.03893 (14)0.61819 (7)1.19692 (17)0.0302 (3)
H181.09570.59001.27740.036*
C190.94557 (14)0.65152 (7)1.24657 (16)0.0293 (3)
H190.93680.64721.35900.035*
C200.86503 (13)0.69161 (6)1.12499 (17)0.0271 (3)
H200.79990.71571.15600.033*
U11U22U33U12U13U23
O10.0224 (5)0.0355 (5)0.0264 (5)0.0089 (4)0.0102 (4)0.0033 (4)
O20.0304 (5)0.0329 (5)0.0221 (5)0.0140 (4)0.0092 (4)0.0064 (4)
N10.0230 (6)0.0253 (5)0.0255 (6)0.0043 (4)0.0075 (5)−0.0019 (4)
N20.0205 (6)0.0237 (5)0.0302 (6)0.0025 (4)0.0050 (5)−0.0001 (4)
N30.0246 (6)0.0298 (6)0.0219 (5)0.0066 (5)0.0018 (4)0.0021 (4)
N40.0242 (6)0.0241 (5)0.0261 (6)0.0051 (4)0.0079 (5)0.0030 (4)
C10.0202 (6)0.0238 (6)0.0221 (6)0.0030 (5)0.0097 (5)−0.0010 (5)
C20.0237 (7)0.0206 (6)0.0340 (7)−0.0018 (5)0.0107 (6)0.0004 (5)
C30.0232 (7)0.0314 (7)0.0326 (7)0.0008 (5)0.0052 (6)−0.0040 (6)
C40.0389 (8)0.0280 (7)0.0260 (7)0.0102 (6)0.0084 (6)0.0020 (5)
C50.0441 (9)0.0198 (6)0.0346 (7)−0.0002 (6)0.0181 (7)0.0007 (5)
C60.0262 (7)0.0263 (6)0.0291 (7)−0.0069 (5)0.0121 (6)−0.0077 (5)
C70.0192 (6)0.0181 (5)0.0248 (6)−0.0026 (5)0.0059 (5)−0.0031 (5)
C80.0297 (7)0.0349 (7)0.0285 (7)0.0062 (6)0.0118 (6)−0.0031 (6)
C90.0321 (8)0.0323 (7)0.0231 (6)0.0014 (6)0.0059 (6)0.0008 (5)
C100.0239 (7)0.0236 (6)0.0288 (7)0.0007 (5)0.0015 (5)0.0012 (5)
C110.0232 (7)0.0282 (6)0.0175 (6)0.0075 (5)0.0034 (5)0.0034 (5)
C120.0213 (6)0.0276 (6)0.0209 (6)0.0000 (5)0.0052 (5)0.0034 (5)
C130.0246 (7)0.0248 (6)0.0205 (6)0.0010 (5)0.0037 (5)−0.0004 (5)
C140.0218 (7)0.0313 (7)0.0240 (6)0.0039 (5)0.0064 (5)0.0011 (5)
C150.0226 (7)0.0320 (7)0.0345 (7)−0.0030 (6)0.0077 (6)0.0028 (6)
C160.0298 (7)0.0234 (6)0.0292 (7)0.0006 (5)0.0039 (6)0.0005 (5)
C170.0218 (6)0.0202 (6)0.0204 (6)0.0007 (5)0.0031 (5)0.0000 (5)
C180.0308 (8)0.0343 (7)0.0210 (6)0.0057 (6)0.0001 (6)0.0038 (5)
C190.0357 (8)0.0316 (7)0.0200 (6)0.0016 (6)0.0069 (6)0.0015 (5)
C200.0275 (7)0.0268 (6)0.0291 (7)0.0024 (5)0.0113 (6)0.0007 (5)
O1—C71.3590 (15)C6—H6B0.9500
O1—C11.4053 (15)C8—C91.3771 (19)
O2—C171.3565 (14)C8—H80.9500
O2—C111.4037 (15)C9—C101.3793 (19)
N1—C71.3205 (16)C9—H90.9500
N1—C81.3394 (17)C10—H100.9500
N2—C71.3307 (16)C11—C161.3772 (19)
N2—C101.3352 (17)C11—C121.3824 (18)
N3—C171.3235 (16)C12—C131.3850 (17)
N3—C181.3414 (17)C12—H120.9500
N4—C171.3297 (16)C13—C141.3851 (18)
N4—C201.3324 (16)C13—H130.9500
C1—C21.3780 (18)C14—C151.3797 (18)
C1—C61.3785 (17)C14—H140.9500
C2—C31.3848 (19)C15—C161.3897 (19)
C2—H20.9500C15—H150.9500
C3—C41.3824 (19)C16—H160.9500
C3—H30.9500C18—C191.3703 (19)
C4—C51.381 (2)C18—H180.9500
C4—H40.9500C19—C201.3792 (18)
C5—C61.389 (2)C19—H190.9500
C5—H15A0.9500C20—H200.9500
C7—O1—C1118.48 (9)N2—C10—C9122.61 (12)
C17—O2—C11117.86 (9)N2—C10—H10118.7
C7—N1—C8114.61 (11)C9—C10—H10118.7
C7—N2—C10114.78 (11)C16—C11—C12122.03 (12)
C17—N3—C18114.85 (11)C16—C11—O2118.22 (11)
C17—N4—C20114.51 (11)C12—C11—O2119.62 (12)
C2—C1—C6121.77 (12)C11—C12—C13118.57 (12)
C2—C1—O1119.74 (11)C11—C12—H12120.7
C6—C1—O1118.26 (11)C13—C12—H12120.7
C1—C2—C3119.11 (12)C12—C13—C14120.38 (12)
C1—C2—H2120.4C12—C13—H13119.8
C3—C2—H2120.4C14—C13—H13119.8
C4—C3—C2119.85 (13)C15—C14—C13120.04 (12)
C4—C3—H3120.1C15—C14—H14120.0
C2—C3—H3120.1C13—C14—H14120.0
C5—C4—C3120.48 (13)C14—C15—C16120.37 (12)
C5—C4—H4119.8C14—C15—H15119.8
C3—C4—H4119.8C16—C15—H15119.8
C4—C5—C6120.05 (12)C11—C16—C15118.61 (12)
C4—C5—H15A120.0C11—C16—H16120.7
C6—C5—H15A120.0C15—C16—H16120.7
C1—C6—C5118.74 (12)N3—C17—N4128.48 (11)
C1—C6—H6B120.6N3—C17—O2118.70 (11)
C5—C6—H6B120.6N4—C17—O2112.82 (10)
N1—C7—N2128.65 (11)N3—C18—C19122.58 (12)
N1—C7—O1118.78 (11)N3—C18—H18118.7
N2—C7—O1112.56 (10)C19—C18—H18118.7
N1—C8—C9122.86 (12)C18—C19—C20116.58 (12)
N1—C8—H8118.6C18—C19—H19121.7
C9—C8—H8118.6C20—C19—H19121.7
C8—C9—C10116.48 (12)N4—C20—C19123.00 (12)
C8—C9—H9121.8N4—C20—H20118.5
C10—C9—H9121.8C19—C20—H20118.5
C7—O1—C1—C2−80.80 (14)C17—O2—C11—C16−106.60 (13)
C7—O1—C1—C6104.66 (13)C17—O2—C11—C1277.48 (15)
C6—C1—C2—C3−0.72 (19)C16—C11—C12—C130.84 (19)
O1—C1—C2—C3−175.06 (11)O2—C11—C12—C13176.60 (10)
C1—C2—C3—C40.64 (19)C11—C12—C13—C140.14 (18)
C2—C3—C4—C5−0.1 (2)C12—C13—C14—C15−0.92 (19)
C3—C4—C5—C6−0.3 (2)C13—C14—C15—C160.7 (2)
C2—C1—C6—C50.28 (18)C12—C11—C16—C15−1.03 (19)
O1—C1—C6—C5174.70 (11)O2—C11—C16—C15−176.84 (11)
C4—C5—C6—C10.24 (19)C14—C15—C16—C110.23 (19)
C8—N1—C7—N2−0.11 (19)C18—N3—C17—N40.05 (19)
C8—N1—C7—O1179.36 (11)C18—N3—C17—O2179.77 (11)
C10—N2—C7—N1−0.22 (19)C20—N4—C17—N30.79 (19)
C10—N2—C7—O1−179.71 (10)C20—N4—C17—O2−178.94 (11)
C1—O1—C7—N1−3.06 (16)C11—O2—C17—N30.36 (17)
C1—O1—C7—N2176.49 (10)C11—O2—C17—N4−179.88 (10)
C7—N1—C8—C90.14 (19)C17—N3—C18—C19−0.63 (19)
N1—C8—C9—C100.1 (2)N3—C18—C19—C200.3 (2)
C7—N2—C10—C90.52 (18)C17—N4—C20—C19−1.10 (19)
C8—C9—C10—N2−0.5 (2)C18—C19—C20—N40.6 (2)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A second monoclinic modification of phenyl quinoxalin-2-yl ether.

Authors:  Zanariah Abdullah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-22

3.  Phenyl pyrazin-2-yl ether.

Authors:  Azila Idris; Azhar Afiffin; Zanariah Abdullah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-12-03

4.  Phenyl quinoxalin-2-yl ether.

Authors:  Nor Duha Hassan; Hairul Anuar Tajuddin; Zanariah Abdullah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-23
  4 in total
  7 in total

1.  2-(p-Tol-yloxy)pyrimidine.

Authors:  Nasir Shah Bakhtiar; Zanariah Abdullah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-15

2.  2-(2-Naphth-yloxy)pyrimidine.

Authors:  Nasir Shah Bakhtiar; Maizathul Akmam A Bakar; Zanariah Abdullah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-18

3.  3-Nitro-phenyl pyrimidin-2-yl ether.

Authors:  Nasir Shah Bakhtiar; Zanariah Abdullah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-06

4.  4-Amino-2-phenoxy-pyrimidine.

Authors:  Nasir Shah Bakhtiar; Zanariah Abdullah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-15

5.  2-(o-Tol-yloxy)pyrimidine.

Authors:  Nasir Shah Bakhtiar; Zanariah Abdullah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-18

6.  1H-Benzimidazol-2-ylmethyl phenyl ether.

Authors:  Noor Doha Hassan; Hairul Anuar Tajuddin; Zanariah Abdullah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-11

7.  2-[4-(Chloro-meth-yl)phen-oxy]-4,6-dimeth-oxy-pyrimidine.

Authors:  Shi-Hong Shen; Kui Hu; Li Sun; Xiao-Long Fan; Hong Dai
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-16
  7 in total

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