Literature DB >> 21583574

2-(2-Naphth-yloxy)pyrimidine.

Nasir Shah Bakhtiar1, Maizathul Akmam A Bakar, Zanariah Abdullah, Seik Weng Ng.   

Abstract

In the title compound, C(14)H(10)N(2)O, the organic rings are inclined at an angle of 86.1 (1)°. The angle at the ether O atom is widened to 117.18 (14)°.

Entities:  

Year:  2009        PMID: 21583574      PMCID: PMC2977450          DOI: 10.1107/S1600536809026592

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For 2-phenoxy­pyrimidine, see: Shah Bakhtiar et al. (2009 ▶).

Experimental

Crystal data

C14H10N2O M = 222.24 Orthorhombic, a = 13.0119 (3) Å b = 22.4944 (5) Å c = 7.5355 (2) Å V = 2205.60 (9) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 120 K 0.35 × 0.25 × 0.15 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: none 7375 measured reflections 1366 independent reflections 1271 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.081 S = 1.03 1366 reflections 154 parameters 1 restraint H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.18 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809026592/bt2997sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809026592/bt2997Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H10N2OF(000) = 928
Mr = 222.24Dx = 1.339 Mg m3
Orthorhombic, Aba2Mo Kα radiation, λ = 0.71073 Å
Hall symbol: A 2 -2acCell parameters from 3105 reflections
a = 13.0119 (3) Åθ = 2.4–28.0°
b = 22.4944 (5) ŵ = 0.09 mm1
c = 7.5355 (2) ÅT = 120 K
V = 2205.60 (9) Å3Block, colorless
Z = 80.35 × 0.25 × 0.15 mm
Bruker SMART APEX diffractometer1271 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.026
graphiteθmax = 27.5°, θmin = 1.8°
ω scansh = −16→16
7375 measured reflectionsk = −29→29
1366 independent reflectionsl = −9→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.081H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0476P)2 + 0.7203P] where P = (Fo2 + 2Fc2)/3
1366 reflections(Δ/σ)max = 0.001
154 parametersΔρmax = 0.19 e Å3
1 restraintΔρmin = −0.18 e Å3
xyzUiso*/Ueq
O10.05750 (10)0.07574 (6)0.49878 (19)0.0292 (3)
N10.15301 (12)0.04684 (7)0.7306 (2)0.0289 (4)
N2−0.00893 (12)0.09426 (7)0.7772 (2)0.0282 (3)
C10.06580 (13)0.07234 (7)0.6787 (2)0.0225 (4)
C20.16628 (15)0.04528 (9)0.9060 (3)0.0343 (5)
H20.22750.02800.95130.041*
C30.09591 (17)0.06737 (10)1.0241 (3)0.0394 (5)
H30.10740.06631.14860.047*
C40.00719 (16)0.09122 (10)0.9522 (3)0.0362 (5)
H4−0.04420.10601.03020.043*
C5−0.02862 (13)0.10606 (8)0.4298 (2)0.0247 (4)
C6−0.01790 (13)0.16416 (8)0.3824 (3)0.0246 (4)
H60.04600.18390.39850.030*
C7−0.10287 (13)0.19501 (7)0.3090 (2)0.0233 (4)
C8−0.09853 (15)0.25595 (8)0.2640 (3)0.0306 (4)
H8−0.03560.27700.27630.037*
C9−0.18366 (15)0.28497 (8)0.2030 (3)0.0326 (4)
H9−0.17950.32600.17470.039*
C10−0.27770 (14)0.25454 (8)0.1818 (3)0.0292 (4)
H10−0.33670.27530.14070.035*
C11−0.28390 (13)0.19533 (8)0.2202 (3)0.0266 (4)
H11−0.34710.17490.20320.032*
C12−0.19730 (13)0.16397 (7)0.2850 (2)0.0226 (3)
C13−0.20239 (14)0.10272 (8)0.3295 (3)0.0271 (4)
H13−0.26410.08130.30860.033*
C14−0.11979 (14)0.07416 (7)0.4021 (3)0.0277 (4)
H14−0.12410.03330.43330.033*
U11U22U33U12U13U23
O10.0250 (6)0.0400 (7)0.0225 (6)0.0093 (5)0.0003 (5)−0.0022 (6)
N10.0250 (7)0.0328 (8)0.0290 (9)0.0070 (6)−0.0002 (6)−0.0046 (7)
N20.0237 (7)0.0350 (8)0.0260 (8)0.0053 (6)0.0005 (7)−0.0019 (7)
C10.0219 (8)0.0222 (7)0.0235 (9)−0.0017 (6)−0.0003 (7)−0.0034 (7)
C20.0309 (10)0.0381 (10)0.0339 (12)0.0091 (8)−0.0079 (9)−0.0034 (8)
C30.0435 (12)0.0513 (13)0.0234 (11)0.0129 (10)−0.0051 (9)−0.0014 (9)
C40.0331 (10)0.0500 (12)0.0255 (11)0.0115 (9)0.0047 (9)−0.0026 (9)
C50.0227 (8)0.0335 (9)0.0180 (8)0.0034 (7)0.0001 (7)−0.0016 (7)
C60.0198 (8)0.0323 (8)0.0218 (9)−0.0040 (6)0.0013 (7)−0.0037 (7)
C70.0245 (8)0.0275 (8)0.0177 (8)−0.0040 (7)0.0020 (7)−0.0029 (7)
C80.0296 (9)0.0299 (9)0.0322 (10)−0.0082 (7)0.0042 (8)−0.0005 (8)
C90.0380 (10)0.0240 (8)0.0358 (11)−0.0032 (7)0.0041 (10)0.0029 (8)
C100.0300 (9)0.0314 (8)0.0263 (10)0.0050 (7)−0.0013 (8)0.0007 (8)
C110.0236 (8)0.0318 (8)0.0243 (9)−0.0029 (6)−0.0013 (7)−0.0005 (7)
C120.0231 (8)0.0261 (8)0.0186 (8)−0.0032 (6)0.0007 (7)−0.0011 (7)
C130.0254 (8)0.0275 (8)0.0285 (10)−0.0066 (7)−0.0034 (8)0.0012 (7)
C140.0293 (9)0.0236 (8)0.0303 (11)−0.0007 (7)0.0006 (9)0.0009 (7)
O1—C11.362 (2)C7—C81.413 (2)
O1—C51.411 (2)C7—C121.425 (2)
N1—C11.330 (2)C8—C91.365 (3)
N1—C21.334 (3)C8—H80.9500
N2—C11.319 (2)C9—C101.411 (3)
N2—C41.337 (3)C9—H90.9500
C2—C31.370 (3)C10—C111.365 (3)
C2—H20.9500C10—H100.9500
C3—C41.383 (3)C11—C121.416 (2)
C3—H30.9500C11—H110.9500
C4—H40.9500C12—C131.420 (2)
C5—C61.362 (2)C13—C141.366 (3)
C5—C141.402 (2)C13—H130.9500
C6—C71.418 (2)C14—H140.9500
C6—H60.9500
C1—O1—C5117.18 (14)C6—C7—C12118.81 (14)
C1—N1—C2114.41 (16)C9—C8—C7120.79 (16)
C1—N2—C4114.86 (16)C9—C8—H8119.6
N2—C1—N1128.65 (17)C7—C8—H8119.6
N2—C1—O1118.73 (15)C8—C9—C10120.66 (16)
N1—C1—O1112.61 (15)C8—C9—H9119.7
N1—C2—C3123.22 (19)C10—C9—H9119.7
N1—C2—H2118.4C11—C10—C9120.02 (17)
C3—C2—H2118.4C11—C10—H10120.0
C2—C3—C4116.4 (2)C9—C10—H10120.0
C2—C3—H3121.8C10—C11—C12120.80 (16)
C4—C3—H3121.8C10—C11—H11119.6
N2—C4—C3122.46 (19)C12—C11—H11119.6
N2—C4—H4118.8C11—C12—C13121.86 (16)
C3—C4—H4118.8C11—C12—C7119.05 (14)
C6—C5—C14122.60 (16)C13—C12—C7119.08 (16)
C6—C5—O1118.62 (16)C14—C13—C12120.94 (16)
C14—C5—O1118.65 (15)C14—C13—H13119.5
C5—C6—C7119.48 (15)C12—C13—H13119.5
C5—C6—H6120.3C13—C14—C5118.99 (15)
C7—C6—H6120.3C13—C14—H14120.5
C8—C7—C6122.49 (15)C5—C14—H14120.5
C8—C7—C12118.66 (16)
C4—N2—C1—N11.5 (3)C6—C7—C8—C9−176.20 (19)
C4—N2—C1—O1−177.46 (18)C12—C7—C8—C91.6 (3)
C2—N1—C1—N2−2.1 (3)C7—C8—C9—C10−0.7 (3)
C2—N1—C1—O1176.91 (17)C8—C9—C10—C11−0.8 (3)
C5—O1—C1—N23.8 (2)C9—C10—C11—C121.3 (3)
C5—O1—C1—N1−175.36 (14)C10—C11—C12—C13178.62 (19)
C1—N1—C2—C30.7 (3)C10—C11—C12—C7−0.3 (3)
N1—C2—C3—C41.0 (3)C8—C7—C12—C11−1.1 (3)
C1—N2—C4—C30.5 (3)C6—C7—C12—C11176.80 (17)
C2—C3—C4—N2−1.7 (4)C8—C7—C12—C13179.90 (17)
C1—O1—C5—C696.5 (2)C6—C7—C12—C13−2.2 (3)
C1—O1—C5—C14−87.6 (2)C11—C12—C13—C14−175.94 (19)
C14—C5—C6—C72.8 (3)C7—C12—C13—C143.0 (3)
O1—C5—C6—C7178.52 (16)C12—C13—C14—C5−1.0 (3)
C5—C6—C7—C8177.22 (18)C6—C5—C14—C13−2.0 (3)
C5—C6—C7—C12−0.6 (3)O1—C5—C14—C13−177.73 (17)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-Phenoxy-pyrimidine.

Authors:  Nasir Shah Bakhtiar; Zanariah Abdullah; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-12-13
  2 in total

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