Literature DB >> 21580944

Isopropyl 2-(5-methyl-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

The title compound, C(15)H(18)O(4)S, was prepared by the oxidation of isopropyl 2-(5-methyl-3-methyl-sulfanyl-1-benzofuran-2-yl)acetate with 3-chloro-peroxy-benzoic acid. The crystal structure is stabilized by inter-molecular π-π inter-actions between the benzene rings; the centroid-centroid distance between the adjacent benzene rings (symmetry code: ) is 3.713 (2) Å. In addition, C-H⋯π and weak inter-molecular C-H⋯O inter-actions are present in the structure.

Entities:  

Year:  2008        PMID: 21580944      PMCID: PMC2959682          DOI: 10.1107/S1600536808031796

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar 2-(5-methyl-3-methyl­sulfinyl-1-benzofuran-2-yl)acetic acid derivatives, see: Choi et al. (2007 ▶, 2008 ▶).

Experimental

Crystal data

C15H18O4S M = 294.35 Triclinic, a = 8.1829 (5) Å b = 9.7027 (6) Å c = 10.6545 (7) Å α = 73.057 (1)° β = 77.463 (1)° γ = 66.421 (1)° V = 736.76 (8) Å3 Z = 2 Mo Kα radiation μ = 0.23 mm−1 T = 298 (2) K 0.40 × 0.30 × 0.30 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: none 5802 measured reflections 2838 independent reflections 2479 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.105 S = 1.07 2838 reflections 185 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.24 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808031796/fb2111sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808031796/fb2111Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H18O4SZ = 2
Mr = 294.35F(000) = 312
Triclinic, P1Dx = 1.327 Mg m3
Hall symbol: -P_1Melting point = 403–404 K
a = 8.1829 (5) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.7027 (6) ÅCell parameters from 4030 reflections
c = 10.6545 (7) Åθ = 2.4–28.2°
α = 73.057 (1)°µ = 0.23 mm1
β = 77.463 (1)°T = 298 K
γ = 66.421 (1)°Block, colourless
V = 736.76 (8) Å30.40 × 0.30 × 0.30 mm
Bruker SMART CCD diffractometer2479 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.035
graphiteθmax = 26.0°, θmin = 2.7°
Detector resolution: 10.0 pixels mm-1h = −10→10
φ and ω scansk = −11→11
5802 measured reflectionsl = −13→13
2838 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: difference Fourier map
wR(F2) = 0.105H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0509P)2 + 0.2101P] where P = (Fo2 + 2Fc2)/3
2838 reflections(Δ/σ)max < 0.001
185 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.24 e Å3
68 constraints
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.74200 (6)0.64759 (5)0.04151 (4)0.04706 (16)
O10.84827 (15)0.47478 (12)0.40980 (11)0.0378 (3)
O20.7528 (2)0.53592 (18)−0.03283 (14)0.0705 (4)
O30.73496 (17)0.88857 (15)0.23749 (16)0.0603 (4)
O41.00780 (15)0.88109 (12)0.25158 (12)0.0422 (3)
C10.7543 (2)0.55223 (18)0.20899 (15)0.0356 (3)
C20.6619 (2)0.45172 (16)0.29204 (15)0.0336 (3)
C30.5364 (2)0.39518 (18)0.27713 (16)0.0380 (4)
H30.49130.42330.19670.046*
C40.4806 (2)0.29641 (19)0.38454 (17)0.0405 (4)
C50.5499 (2)0.25528 (19)0.50517 (17)0.0424 (4)
H50.51090.18880.57610.051*
C60.6736 (2)0.30967 (18)0.52246 (16)0.0401 (4)
H60.71890.28180.60270.048*
C70.7260 (2)0.40767 (17)0.41396 (15)0.0343 (3)
C80.8622 (2)0.56095 (18)0.28352 (15)0.0361 (3)
C90.9868 (2)0.64659 (18)0.25585 (18)0.0405 (4)
H9A1.06070.63210.17280.049*
H9B1.06570.60290.32470.049*
C100.8915 (2)0.81825 (18)0.24831 (16)0.0384 (4)
C110.3469 (3)0.2312 (3)0.3719 (2)0.0598 (5)
H11A0.29590.28460.29020.090*
H11B0.25330.24430.44430.090*
H11C0.40660.12320.37310.090*
C120.5114 (3)0.7722 (3)0.0561 (2)0.0717 (6)
H12A0.48140.8392−0.02840.108*
H12B0.49260.83320.11820.108*
H12C0.43670.71120.08650.108*
C130.9392 (2)1.04906 (18)0.24297 (18)0.0426 (4)
H130.82391.07910.29820.051*
C140.9158 (3)1.1356 (2)0.1023 (2)0.0603 (5)
H14A0.83231.11040.07070.090*
H14B1.02941.10710.04880.090*
H14C0.87081.24460.09740.090*
C151.0762 (3)1.0762 (2)0.2963 (3)0.0692 (6)
H15A1.19071.04070.24530.104*
H15B1.08501.02060.38680.104*
H15C1.04071.18460.29100.104*
U11U22U33U12U13U23
S0.0572 (3)0.0469 (3)0.0365 (2)−0.0241 (2)−0.00906 (19)0.00182 (17)
O10.0416 (6)0.0381 (6)0.0392 (6)−0.0204 (5)−0.0113 (5)−0.0035 (5)
O20.0994 (12)0.0694 (9)0.0444 (8)−0.0262 (9)−0.0159 (8)−0.0158 (7)
O30.0408 (7)0.0449 (7)0.0966 (11)−0.0190 (6)−0.0103 (7)−0.0113 (7)
O40.0420 (6)0.0328 (6)0.0568 (7)−0.0177 (5)−0.0114 (5)−0.0075 (5)
C10.0406 (8)0.0324 (7)0.0355 (8)−0.0163 (7)−0.0064 (6)−0.0040 (6)
C20.0373 (8)0.0292 (7)0.0352 (8)−0.0128 (6)−0.0055 (6)−0.0067 (6)
C30.0411 (9)0.0370 (8)0.0415 (8)−0.0167 (7)−0.0096 (7)−0.0098 (7)
C40.0394 (9)0.0362 (8)0.0512 (10)−0.0175 (7)−0.0047 (7)−0.0124 (7)
C50.0458 (9)0.0356 (8)0.0454 (9)−0.0205 (7)−0.0016 (7)−0.0031 (7)
C60.0449 (9)0.0377 (8)0.0375 (8)−0.0165 (7)−0.0095 (7)−0.0024 (6)
C70.0357 (8)0.0304 (7)0.0394 (8)−0.0140 (6)−0.0076 (6)−0.0063 (6)
C80.0395 (8)0.0312 (7)0.0386 (8)−0.0159 (6)−0.0057 (6)−0.0040 (6)
C90.0396 (9)0.0376 (8)0.0490 (9)−0.0200 (7)−0.0070 (7)−0.0068 (7)
C100.0394 (9)0.0387 (8)0.0397 (8)−0.0206 (7)−0.0038 (7)−0.0038 (6)
C110.0605 (12)0.0615 (12)0.0731 (13)−0.0393 (10)−0.0128 (10)−0.0095 (10)
C120.0665 (14)0.0616 (13)0.0692 (14)−0.0084 (11)−0.0246 (11)0.0023 (11)
C130.0444 (9)0.0327 (8)0.0540 (10)−0.0160 (7)−0.0051 (8)−0.0119 (7)
C140.0797 (15)0.0395 (10)0.0607 (12)−0.0235 (10)−0.0124 (10)−0.0039 (8)
C150.0745 (15)0.0483 (11)0.1006 (18)−0.0231 (11)−0.0311 (13)−0.0232 (11)
S—O21.4839 (15)C8—C91.490 (2)
S—C11.7583 (16)C9—C101.516 (2)
S—C121.790 (2)C9—H9A0.9700
O1—C81.3698 (18)C9—H9B0.9700
O1—C71.3830 (18)C11—H11A0.9600
O3—C101.199 (2)C11—H11B0.9600
O4—C101.3305 (19)C11—H11C0.9600
O4—C131.4774 (19)C12—H12A0.9600
C1—C81.349 (2)C12—H12B0.9600
C1—C21.450 (2)C12—H12C0.9600
C2—C71.392 (2)C13—C151.500 (3)
C2—C31.397 (2)C13—C141.500 (3)
C3—C41.386 (2)C13—H130.9800
C3—H30.9300C14—H14A0.9600
C4—C51.403 (2)C14—H14B0.9600
C4—C111.511 (2)C14—H14C0.9600
C5—C61.379 (2)C15—H15A0.9600
C5—H50.9300C15—H15B0.9600
C6—C71.376 (2)C15—H15C0.9600
C6—H60.9300
O2—S—C1108.11 (8)H9A—C9—H9B107.7
O2—S—C12106.21 (11)O3—C10—O4124.63 (15)
C1—S—C1297.74 (9)O3—C10—C9125.20 (14)
C8—O1—C7106.03 (11)O4—C10—C9110.14 (13)
C10—O4—C13117.80 (13)C4—C11—H11A109.5
C8—C1—C2107.31 (13)C4—C11—H11B109.5
C8—C1—S123.03 (12)H11A—C11—H11B109.5
C2—C1—S129.65 (12)C4—C11—H11C109.5
C7—C2—C3119.08 (14)H11A—C11—H11C109.5
C7—C2—C1104.42 (13)H11B—C11—H11C109.5
C3—C2—C1136.50 (15)S—C12—H12A109.5
C4—C3—C2118.66 (15)S—C12—H12B109.5
C4—C3—H3120.7H12A—C12—H12B109.5
C2—C3—H3120.7S—C12—H12C109.5
C3—C4—C5119.95 (15)H12A—C12—H12C109.5
C3—C4—C11120.26 (16)H12B—C12—H12C109.5
C5—C4—C11119.79 (16)O4—C13—C15105.45 (14)
C6—C5—C4122.50 (15)O4—C13—C14109.85 (14)
C6—C5—H5118.7C15—C13—C14112.29 (17)
C4—C5—H5118.7O4—C13—H13109.7
C7—C6—C5116.08 (15)C15—C13—H13109.7
C7—C6—H6122.0C14—C13—H13109.7
C5—C6—H6122.0C13—C14—H14A109.5
C6—C7—O1125.47 (14)C13—C14—H14B109.5
C6—C7—C2123.73 (14)H14A—C14—H14B109.5
O1—C7—C2110.80 (13)C13—C14—H14C109.5
C1—C8—O1111.44 (13)H14A—C14—H14C109.5
C1—C8—C9132.89 (15)H14B—C14—H14C109.5
O1—C8—C9115.66 (13)C13—C15—H15A109.5
C8—C9—C10113.54 (14)C13—C15—H15B109.5
C8—C9—H9A108.9H15A—C15—H15B109.5
C10—C9—H9A108.9C13—C15—H15C109.5
C8—C9—H9B108.9H15A—C15—H15C109.5
C10—C9—H9B108.9H15B—C15—H15C109.5
O2—S—C1—C8133.07 (16)C3—C2—C7—C60.4 (2)
C12—S—C1—C8−117.00 (17)C1—C2—C7—C6−179.35 (15)
O2—S—C1—C2−45.61 (17)C3—C2—C7—O1−179.98 (13)
C12—S—C1—C264.32 (17)C1—C2—C7—O10.30 (17)
C8—C1—C2—C70.00 (18)C2—C1—C8—O1−0.30 (19)
S—C1—C2—C7178.83 (13)S—C1—C8—O1−179.23 (11)
C8—C1—C2—C3−179.65 (18)C2—C1—C8—C9−178.84 (17)
S—C1—C2—C3−0.8 (3)S—C1—C8—C92.2 (3)
C7—C2—C3—C4−0.3 (2)C7—O1—C8—C10.48 (18)
C1—C2—C3—C4179.36 (17)C7—O1—C8—C9179.29 (13)
C2—C3—C4—C50.1 (2)C1—C8—C9—C1074.3 (2)
C2—C3—C4—C11−179.20 (16)O1—C8—C9—C10−104.20 (16)
C3—C4—C5—C60.0 (3)C13—O4—C10—O30.8 (2)
C11—C4—C5—C6179.31 (17)C13—O4—C10—C9179.02 (13)
C4—C5—C6—C70.1 (3)C8—C9—C10—O3−14.9 (2)
C5—C6—C7—O1−179.86 (15)C8—C9—C10—O4166.85 (14)
C5—C6—C7—C2−0.3 (2)C10—O4—C13—C15160.41 (17)
C8—O1—C7—C6179.16 (15)C10—O4—C13—C14−78.39 (19)
C8—O1—C7—C2−0.48 (17)
D—H···AD—HH···AD···AD—H···A
C9—H9A···O2i0.972.383.249 (2)149
C13—H13···Cg1ii0.982.913.656 (2)134
C15—H15C···Cg2ii0.962.963.837 (2)152
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C2–C7 and C1/C2/C7/C8/O1 rings, respectively.

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9A⋯O2i0.972.383.249 (2)149
C13—H13⋯Cg1ii0.982.913.656 (2)134
C15—H15CCg2ii0.962.963.837 (2)152

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Methyl 2-(5-methyl-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-06
  2 in total
  6 in total

1.  Isopropyl 2-(5-bromo-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-08

2.  Ethyl 2-(3-ethyl-sulfinyl-5-methyl-1-benzo-furan-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-14

3.  Isopropyl 2-(5-iodo-7-methyl-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-26

4.  Isopropyl 2-(4,6-dimethyl-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-25

5.  Isopropyl 2-(5-iodo-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-20

6.  2-(5-Methyl-3-methyl-sulfinyl-1-benzofuran-2-yl)acetic acid.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-29
  6 in total

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