Literature DB >> 21201698

Methyl 2-(5-methyl-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

The title compound, C(13)H(14)O(4)S, was prepared by oxidation of methyl 2-(5-methyl-3-methyl-sulfanyl-1-benzofuran-2-yl)acetate with 3-chloro-peroxy-benzoic acid. The O atom and methyl group of the methyl-sulfinyl substituent lie on opposite sides of the plane of the benzofuran system. The crystal structure is stabilized by inter-molecular aromatic π-π inter-actions between the benzene rings of neighbouring mol-ecules, with a centroid-centroid separation of 3.841 (3) Å.

Entities:  

Year:  2008        PMID: 21201698      PMCID: PMC2960547          DOI: 10.1107/S1600536808024689

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar ethyl 2-(3-methyl­sulfinyl-1-benzofuran-2-yl)acetate derivatives, see: Choi et al. (2007a ▶,b ▶).

Experimental

Crystal data

C13H14O4S M = 266.30 Triclinic, a = 7.9331 (6) Å b = 8.1097 (6) Å c = 10.7017 (8) Å α = 71.601 (1)° β = 81.107 (1)° γ = 84.303 (1)° V = 644.51 (8) Å3 Z = 2 Mo Kα radiation μ = 0.26 mm−1 T = 298 (2) K 0.40 × 0.20 × 0.20 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: none 3414 measured reflections 2237 independent reflections 1788 reflections with I > 2σ(I) R int = 0.052

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.123 S = 1.03 2237 reflections 166 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.35 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808024689/bh2186sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808024689/bh2186Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H14O4SZ = 2
Mr = 266.30F000 = 280
Triclinic, P1Dx = 1.372 Mg m3
Hall symbol: -P 1Melting point = 380–381 K
a = 7.9331 (6) ÅMo Kα radiation λ = 0.71073 Å
b = 8.1097 (6) ÅCell parameters from 1817 reflections
c = 10.7017 (8) Åθ = 2.6–27.3º
α = 71.601 (1)ºµ = 0.26 mm1
β = 81.107 (1)ºT = 298 (2) K
γ = 84.303 (1)ºBlock, colorless
V = 644.51 (8) Å30.40 × 0.20 × 0.20 mm
Bruker SMART CCD diffractometer2237 independent reflections
Radiation source: fine-focus sealed tube1788 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.052
Detector resolution: 10.0 pixels mm-1θmax = 25.0º
T = 298(2) Kθmin = 2.0º
φ and ω scansh = −9→9
Absorption correction: nonek = −9→9
3414 measured reflectionsl = −9→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.045H-atom parameters constrained
wR(F2) = 0.123  w = 1/[σ2(Fo2) + (0.0647P)2 + 0.1924P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
2237 reflectionsΔρmax = 0.34 e Å3
166 parametersΔρmin = −0.35 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
xyzUiso*/Ueq
S0.22227 (8)0.36975 (8)0.45695 (6)0.0430 (2)
O10.16435 (19)0.5432 (2)0.07927 (16)0.0392 (4)
O2−0.1560 (3)0.0853 (3)0.3071 (3)0.0850 (8)
O30.1251 (2)0.0969 (2)0.2923 (2)0.0565 (5)
O40.2489 (3)0.5059 (3)0.51807 (19)0.0597 (5)
C10.2418 (3)0.4676 (3)0.2838 (2)0.0348 (5)
C20.3713 (3)0.5757 (3)0.1944 (2)0.0342 (5)
C30.5246 (3)0.6396 (3)0.2059 (3)0.0410 (6)
H30.56470.61110.28770.049*
C40.6143 (3)0.7457 (3)0.0930 (3)0.0445 (6)
C50.5523 (3)0.7870 (3)−0.0291 (3)0.0486 (7)
H50.61470.8592−0.10380.058*
C60.4028 (3)0.7256 (3)−0.0442 (3)0.0460 (6)
H60.36280.7534−0.12600.055*
C70.3168 (3)0.6199 (3)0.0709 (2)0.0366 (5)
C80.1227 (3)0.4533 (3)0.2103 (2)0.0352 (5)
C9−0.0416 (3)0.3635 (3)0.2452 (3)0.0404 (6)
H9A−0.10490.40710.16970.048*
H9B−0.10810.39750.31810.048*
C10−0.0307 (3)0.1679 (3)0.2841 (3)0.0447 (6)
C110.1449 (4)−0.0918 (4)0.3298 (4)0.0801 (11)
H11A0.0761−0.14090.41320.120*
H11B0.2627−0.12800.33820.120*
H11C0.1090−0.13120.26290.120*
C120.7804 (3)0.8174 (4)0.1000 (3)0.0616 (8)
H12A0.81190.76770.18780.092*
H12B0.76610.94160.07970.092*
H12C0.86850.78840.03690.092*
C130.4142 (4)0.2333 (4)0.4661 (3)0.0573 (7)
H13A0.51120.30420.43960.086*
H13B0.41760.16350.40800.086*
H13C0.41670.15880.55560.086*
U11U22U33U12U13U23
S0.0403 (4)0.0487 (4)0.0362 (4)−0.0034 (3)−0.0055 (3)−0.0072 (3)
O10.0378 (9)0.0428 (9)0.0376 (9)−0.0039 (7)−0.0099 (7)−0.0104 (7)
O20.0557 (13)0.0589 (13)0.135 (2)−0.0209 (11)−0.0173 (13)−0.0150 (14)
O30.0415 (10)0.0357 (9)0.0832 (14)−0.0039 (8)0.0035 (9)−0.0100 (9)
O40.0708 (13)0.0711 (13)0.0456 (11)0.0066 (10)−0.0141 (10)−0.0297 (10)
C10.0363 (12)0.0338 (12)0.0349 (12)−0.0017 (9)−0.0056 (10)−0.0110 (10)
C20.0354 (12)0.0307 (11)0.0377 (13)0.0006 (9)−0.0047 (10)−0.0128 (10)
C30.0376 (13)0.0413 (13)0.0482 (15)−0.0020 (10)−0.0082 (11)−0.0182 (12)
C40.0369 (13)0.0363 (13)0.0611 (17)−0.0010 (10)−0.0039 (12)−0.0175 (12)
C50.0433 (14)0.0415 (14)0.0517 (16)−0.0044 (11)0.0054 (12)−0.0060 (12)
C60.0492 (15)0.0442 (14)0.0397 (14)−0.0006 (12)−0.0058 (12)−0.0065 (11)
C70.0337 (12)0.0341 (12)0.0435 (14)0.0006 (9)−0.0065 (10)−0.0139 (10)
C80.0354 (12)0.0317 (11)0.0381 (13)−0.0004 (9)−0.0038 (10)−0.0110 (10)
C90.0317 (12)0.0448 (14)0.0466 (15)−0.0027 (10)−0.0082 (11)−0.0152 (11)
C100.0423 (14)0.0478 (15)0.0453 (15)−0.0094 (11)−0.0040 (11)−0.0148 (12)
C110.070 (2)0.0385 (16)0.115 (3)−0.0043 (15)0.006 (2)−0.0086 (17)
C120.0427 (15)0.0532 (16)0.088 (2)−0.0115 (12)−0.0069 (15)−0.0182 (16)
C130.0571 (17)0.0524 (16)0.0596 (18)0.0078 (13)−0.0169 (14)−0.0116 (14)
S—O41.495 (2)C5—H50.9300
S—C11.759 (2)C6—C71.381 (3)
S—C131.788 (3)C6—H60.9300
O1—C81.366 (3)C8—C91.495 (3)
O1—C71.392 (3)C9—C101.505 (3)
O2—C101.204 (3)C9—H9A0.9700
O3—C101.315 (3)C9—H9B0.9700
O3—C111.453 (3)C11—H11A0.9600
C1—C81.354 (3)C11—H11B0.9600
C1—C21.444 (3)C11—H11C0.9600
C2—C71.382 (3)C12—H12A0.9600
C2—C31.405 (3)C12—H12B0.9600
C3—C41.381 (4)C12—H12C0.9600
C3—H30.9300C13—H13A0.9600
C4—C51.397 (4)C13—H13B0.9600
C4—C121.513 (3)C13—H13C0.9600
C5—C61.382 (4)
O4—S—C1107.63 (11)O1—C8—C9116.0 (2)
O4—S—C13105.85 (13)C8—C9—C10117.4 (2)
C1—S—C1398.82 (13)C8—C9—H9A108.0
C8—O1—C7106.00 (17)C10—C9—H9A108.0
C10—O3—C11117.3 (2)C8—C9—H9B108.0
C8—C1—C2107.3 (2)C10—C9—H9B108.0
C8—C1—S122.09 (18)H9A—C9—H9B107.2
C2—C1—S130.59 (18)O2—C10—O3123.6 (2)
C7—C2—C3119.0 (2)O2—C10—C9121.9 (2)
C7—C2—C1104.91 (19)O3—C10—C9114.4 (2)
C3—C2—C1136.1 (2)O3—C11—H11A109.5
C4—C3—C2118.5 (2)O3—C11—H11B109.5
C4—C3—H3120.8H11A—C11—H11B109.5
C2—C3—H3120.8O3—C11—H11C109.5
C3—C4—C5120.0 (2)H11A—C11—H11C109.5
C3—C4—C12120.5 (3)H11B—C11—H11C109.5
C5—C4—C12119.4 (2)C4—C12—H12A109.5
C6—C5—C4123.0 (2)C4—C12—H12B109.5
C6—C5—H5118.5H12A—C12—H12B109.5
C4—C5—H5118.5C4—C12—H12C109.5
C7—C6—C5115.3 (2)H12A—C12—H12C109.5
C7—C6—H6122.4H12B—C12—H12C109.5
C5—C6—H6122.4S—C13—H13A109.5
C6—C7—C2124.2 (2)S—C13—H13B109.5
C6—C7—O1125.2 (2)H13A—C13—H13B109.5
C2—C7—O1110.58 (19)S—C13—H13C109.5
C1—C8—O1111.21 (19)H13A—C13—H13C109.5
C1—C8—C9132.8 (2)H13B—C13—H13C109.5
O4—S—C1—C8−129.6 (2)C1—C2—C7—C6179.0 (2)
C13—S—C1—C8120.6 (2)C3—C2—C7—O1179.36 (19)
O4—S—C1—C248.5 (2)C1—C2—C7—O1−1.1 (2)
C13—S—C1—C2−61.4 (2)C8—O1—C7—C6−178.8 (2)
C8—C1—C2—C70.5 (2)C8—O1—C7—C21.2 (2)
S—C1—C2—C7−177.78 (18)C2—C1—C8—O10.3 (3)
C8—C1—C2—C3180.0 (3)S—C1—C8—O1178.70 (15)
S—C1—C2—C31.7 (4)C2—C1—C8—C9−178.3 (2)
C7—C2—C3—C40.5 (3)S—C1—C8—C90.1 (4)
C1—C2—C3—C4−178.9 (2)C7—O1—C8—C1−0.9 (2)
C2—C3—C4—C5−0.1 (4)C7—O1—C8—C9177.97 (19)
C2—C3—C4—C12−179.8 (2)C1—C8—C9—C10−72.1 (3)
C3—C4—C5—C6−0.3 (4)O1—C8—C9—C10109.3 (2)
C12—C4—C5—C6179.4 (2)C11—O3—C10—O20.7 (4)
C4—C5—C6—C70.3 (4)C11—O3—C10—C9179.8 (3)
C5—C6—C7—C20.2 (4)C8—C9—C10—O2−176.1 (3)
C5—C6—C7—O1−179.8 (2)C8—C9—C10—O34.8 (3)
C3—C2—C7—C6−0.6 (3)
  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  5 in total

1.  Methyl 2-(5-bromo-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-20

2.  Ethyl 2-(3-ethyl-sulfinyl-5-methyl-1-benzo-furan-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-14

3.  Methyl 2-(5-chloro-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-18

4.  2-(5-Methyl-3-methyl-sulfinyl-1-benzofuran-2-yl)acetic acid.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-29

5.  Isopropyl 2-(5-methyl-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-09
  5 in total

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