| Literature DB >> 21580895 |
Abstract
The title complex, [ZnCl(2)(C(12)H(18)N(2)O)]·0.5H(2)O, is a mononuclear zinc(II) compound derived from the zwitterionic form of the Schiff base 2-[3-(dimethyl-amino)propyl-imino-meth-yl]-phenol. The Zn(II) atom is four-coordinated by the imine N and the phenolate O atoms of the Schiff base ligand, and by two chloride ions, in a distorted tetra-hedral coordination geometry. The dimethyl-ammonio group is disordered over two positions with site occupancies of 0.51 (3) and 0.49 (3). In the asymmetric unit, there is also a disordered water mol-ecule with a partial occupancy of 0.5. In the crystal structure, the water mol-ecules are linked to the Schiff base complex mol-ecules through inter-molecular N-H⋯O hydrogen bonds. Mol-ecules are further linked through additional inter-molecular N-H⋯O hydrogen bonds, forming chains running along the b axis.Entities:
Year: 2008 PMID: 21580895 PMCID: PMC2959570 DOI: 10.1107/S1600536808033977
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [ZnCl2(C12H18N2O)]·0.5H2O | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2n | Cell parameters from 3872 reflections |
| θ = 2.4–25.3° | |
| µ = 1.89 mm−1 | |
| Block, colorless | |
| 0.23 × 0.23 × 0.22 mm |
| Bruker APEXII CCD area-detector diffractometer | 3426 independent reflections |
| Radiation source: fine-focus sealed tube | 2915 reflections with |
| graphite | |
| ω scans | θmax = 27.0°, θmin = 2.0° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | |
| 12635 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 3426 reflections | Δρmax = 0.42 e Å−3 |
| 206 parameters | Δρmin = −0.40 e Å−3 |
| 4 restraints | Absolute structure: Flack (1983), 1569 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.03 (2) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| Zn1 | 0.73458 (3) | 1.10664 (2) | 1.00222 (10) | 0.04900 (15) | |
| Cl1 | 0.59091 (11) | 1.09513 (7) | 1.1550 (2) | 0.0746 (4) | |
| Cl2 | 0.86270 (14) | 1.03257 (11) | 1.1229 (3) | 0.1022 (5) | |
| N1 | 0.7159 (3) | 1.0824 (2) | 0.7323 (5) | 0.0449 (7) | |
| O1 | 0.7749 (2) | 1.21988 (16) | 0.9610 (4) | 0.0563 (8) | |
| O2 | 0.9856 (5) | 0.9368 (4) | 0.1435 (12) | 0.0704 (18) | 0.50 |
| C1 | 0.8128 (3) | 1.2011 (2) | 0.6371 (6) | 0.0488 (9) | |
| C2 | 0.8218 (3) | 1.2425 (2) | 0.8055 (6) | 0.0464 (9) | |
| C3 | 0.8817 (4) | 1.3118 (3) | 0.8081 (9) | 0.0656 (13) | |
| H3 | 0.8897 | 1.3401 | 0.9189 | 0.079* | |
| C4 | 0.9288 (4) | 1.3393 (3) | 0.6546 (10) | 0.0783 (16) | |
| H4 | 0.9668 | 1.3868 | 0.6615 | 0.094* | |
| C5 | 0.9217 (4) | 1.2989 (3) | 0.4892 (11) | 0.0835 (17) | |
| H5 | 0.9564 | 1.3172 | 0.3853 | 0.100* | |
| C6 | 0.8631 (4) | 1.2317 (3) | 0.4807 (8) | 0.0736 (14) | |
| H6 | 0.8558 | 1.2049 | 0.3678 | 0.088* | |
| C7 | 0.7537 (3) | 1.1280 (3) | 0.6068 (6) | 0.0506 (10) | |
| H7 | 0.7423 | 1.1129 | 0.4843 | 0.061* | |
| C8 | 0.6601 (3) | 1.0080 (2) | 0.6728 (7) | 0.0575 (11) | |
| H8A | 0.5968 | 1.0053 | 0.7389 | 0.069* | |
| H8B | 0.6455 | 1.0117 | 0.5413 | 0.069* | |
| C9 | 0.7184 (4) | 0.9327 (3) | 0.7093 (7) | 0.0674 (13) | |
| H9A | 0.6748 | 0.8858 | 0.6947 | 0.081* | |
| H9B | 0.7419 | 0.9335 | 0.8365 | 0.081* | |
| N2 | 0.8576 (13) | 0.8452 (7) | 0.543 (2) | 0.055 (4) | 0.51 (3) |
| H2C | 0.8090 | 0.8071 | 0.5247 | 0.066* | 0.51 (3) |
| C10 | 0.8059 (4) | 0.9240 (3) | 0.5831 (9) | 0.0800 (18) | 0.51 (3) |
| H10A | 0.8570 | 0.9608 | 0.6296 | 0.096* | 0.51 (3) |
| H10B | 0.7849 | 0.9456 | 0.4641 | 0.096* | 0.51 (3) |
| C11 | 0.9122 (17) | 0.8214 (9) | 0.713 (4) | 0.091 (8) | 0.51 (3) |
| H11A | 0.8683 | 0.8257 | 0.8176 | 0.137* | 0.51 (3) |
| H11B | 0.9687 | 0.8569 | 0.7296 | 0.137* | 0.51 (3) |
| H11C | 0.9351 | 0.7661 | 0.7008 | 0.137* | 0.51 (3) |
| C12 | 0.9244 (10) | 0.8403 (9) | 0.389 (3) | 0.082 (6) | 0.51 (3) |
| H12A | 0.9523 | 0.7864 | 0.3816 | 0.123* | 0.51 (3) |
| H12B | 0.9775 | 0.8793 | 0.4036 | 0.123* | 0.51 (3) |
| H12C | 0.8883 | 0.8519 | 0.2765 | 0.123* | 0.51 (3) |
| N2' | 0.8443 (12) | 0.8327 (9) | 0.641 (4) | 0.071 (5) | 0.49 (3) |
| H2'A | 0.7970 | 0.7970 | 0.5998 | 0.085* | 0.49 (3) |
| C10' | 0.8059 (4) | 0.9240 (3) | 0.5831 (9) | 0.0800 (18) | 0.49 (3) |
| H10C | 0.8566 | 0.9650 | 0.6072 | 0.096* | 0.49 (3) |
| H10D | 0.7860 | 0.9265 | 0.4538 | 0.096* | 0.49 (3) |
| C11' | 0.8661 (16) | 0.8106 (11) | 0.824 (4) | 0.101 (8) | 0.49 (3) |
| H11D | 0.8812 | 0.7534 | 0.8288 | 0.152* | 0.49 (3) |
| H11E | 0.8091 | 0.8220 | 0.9010 | 0.152* | 0.49 (3) |
| H11F | 0.9228 | 0.8413 | 0.8668 | 0.152* | 0.49 (3) |
| C12' | 0.9351 (17) | 0.8164 (14) | 0.534 (6) | 0.139 (12) | 0.49 (3) |
| H12D | 0.9592 | 0.7626 | 0.5629 | 0.209* | 0.49 (3) |
| H12E | 0.9855 | 0.8559 | 0.5658 | 0.209* | 0.49 (3) |
| H12F | 0.9203 | 0.8199 | 0.4044 | 0.209* | 0.49 (3) |
| H2A | 0.984 (7) | 0.973 (5) | 0.228 (11) | 0.080* | 0.50 |
| H2B | 0.930 (4) | 0.911 (5) | 0.146 (15) | 0.080* | 0.50 |
| Zn1 | 0.0640 (3) | 0.0390 (2) | 0.0440 (2) | −0.00734 (18) | 0.0112 (3) | −0.0061 (3) |
| Cl1 | 0.0750 (8) | 0.0720 (8) | 0.0768 (8) | −0.0113 (6) | 0.0324 (7) | −0.0094 (6) |
| Cl2 | 0.1140 (13) | 0.1004 (11) | 0.0921 (11) | −0.0145 (9) | −0.0136 (10) | 0.0143 (9) |
| N1 | 0.0476 (18) | 0.0393 (16) | 0.0478 (18) | 0.0030 (14) | 0.0062 (15) | −0.0058 (14) |
| O1 | 0.0774 (18) | 0.0361 (12) | 0.055 (2) | −0.0102 (12) | 0.0190 (14) | −0.0142 (12) |
| O2 | 0.056 (4) | 0.054 (4) | 0.102 (6) | 0.011 (3) | 0.005 (4) | 0.015 (4) |
| C1 | 0.052 (2) | 0.0417 (19) | 0.053 (2) | 0.0019 (17) | 0.0052 (18) | 0.0038 (18) |
| C2 | 0.051 (2) | 0.0308 (17) | 0.058 (2) | −0.0004 (16) | 0.0125 (19) | 0.0006 (16) |
| C3 | 0.067 (3) | 0.042 (2) | 0.088 (4) | −0.008 (2) | 0.011 (3) | −0.014 (2) |
| C4 | 0.064 (3) | 0.048 (2) | 0.123 (5) | −0.009 (2) | 0.031 (3) | 0.009 (3) |
| C5 | 0.079 (3) | 0.072 (3) | 0.100 (4) | 0.002 (2) | 0.041 (4) | 0.019 (4) |
| C6 | 0.088 (3) | 0.070 (3) | 0.063 (3) | 0.001 (2) | 0.030 (3) | 0.010 (3) |
| C7 | 0.062 (3) | 0.049 (2) | 0.041 (2) | −0.0007 (18) | 0.0022 (19) | −0.0092 (19) |
| C8 | 0.059 (3) | 0.046 (2) | 0.068 (3) | −0.0111 (19) | 0.001 (2) | −0.018 (2) |
| C9 | 0.098 (4) | 0.043 (2) | 0.061 (3) | −0.021 (2) | −0.006 (3) | −0.010 (2) |
| N2 | 0.070 (7) | 0.026 (3) | 0.069 (9) | −0.004 (3) | −0.020 (7) | −0.001 (5) |
| C10 | 0.078 (3) | 0.037 (2) | 0.124 (5) | −0.002 (2) | −0.008 (3) | −0.020 (3) |
| C11 | 0.085 (14) | 0.052 (7) | 0.136 (19) | 0.000 (7) | −0.051 (14) | 0.024 (9) |
| C12 | 0.072 (8) | 0.049 (7) | 0.125 (14) | 0.020 (5) | 0.017 (9) | −0.028 (7) |
| N2' | 0.067 (8) | 0.044 (7) | 0.101 (14) | 0.004 (5) | −0.006 (9) | −0.029 (8) |
| C10' | 0.078 (3) | 0.037 (2) | 0.124 (5) | −0.002 (2) | −0.008 (3) | −0.020 (3) |
| C11' | 0.094 (12) | 0.051 (8) | 0.16 (2) | 0.014 (8) | −0.054 (13) | −0.027 (10) |
| C12' | 0.094 (12) | 0.127 (16) | 0.20 (4) | 0.010 (12) | 0.068 (19) | −0.002 (19) |
| Zn1—O1 | 1.954 (3) | C9—C10 | 1.487 (8) |
| Zn1—N1 | 2.003 (4) | C9—H9A | 0.9700 |
| Zn1—Cl1 | 2.2182 (13) | C9—H9B | 0.9700 |
| Zn1—Cl2 | 2.2692 (18) | N2—C12 | 1.430 (19) |
| N1—C7 | 1.277 (6) | N2—C11 | 1.47 (2) |
| N1—C8 | 1.491 (5) | N2—C10 | 1.491 (15) |
| O1—C2 | 1.336 (5) | N2—H2C | 0.9100 |
| O2—H2A | 0.852 (10) | C10—H10A | 0.9700 |
| O2—H2B | 0.848 (10) | C10—H10B | 0.9700 |
| C1—C2 | 1.396 (6) | C11—H11A | 0.9600 |
| C1—C6 | 1.405 (6) | C11—H11B | 0.9600 |
| C1—C7 | 1.451 (6) | C11—H11C | 0.9600 |
| C2—C3 | 1.389 (6) | C12—H12A | 0.9600 |
| C3—C4 | 1.350 (8) | C12—H12B | 0.9600 |
| C3—H3 | 0.9300 | C12—H12C | 0.9600 |
| C4—C5 | 1.368 (9) | N2'—C11' | 1.40 (3) |
| C4—H4 | 0.9300 | N2'—C12' | 1.46 (2) |
| C5—C6 | 1.352 (7) | N2'—H2'A | 0.9100 |
| C5—H5 | 0.9300 | C11'—H11D | 0.9600 |
| C6—H6 | 0.9300 | C11'—H11E | 0.9600 |
| C7—H7 | 0.9300 | C11'—H11F | 0.9600 |
| C8—C9 | 1.481 (7) | C12'—H12D | 0.9600 |
| C8—H8A | 0.9700 | C12'—H12E | 0.9600 |
| C8—H8B | 0.9700 | C12'—H12F | 0.9600 |
| O1—Zn1—N1 | 94.29 (13) | C10—C9—H9B | 109.1 |
| O1—Zn1—Cl1 | 113.19 (9) | H9A—C9—H9B | 107.8 |
| N1—Zn1—Cl1 | 111.04 (11) | C12—N2—C11 | 108.9 (14) |
| O1—Zn1—Cl2 | 111.03 (11) | C12—N2—C10 | 119.2 (9) |
| N1—Zn1—Cl2 | 111.10 (11) | C11—N2—C10 | 107.3 (12) |
| Cl1—Zn1—Cl2 | 114.48 (7) | C12—N2—H2C | 106.9 |
| C7—N1—C8 | 118.1 (4) | C11—N2—H2C | 106.9 |
| C7—N1—Zn1 | 121.6 (3) | C10—N2—H2C | 106.9 |
| C8—N1—Zn1 | 120.3 (3) | C9—C10—N2 | 124.4 (8) |
| C2—O1—Zn1 | 121.3 (2) | C9—C10—H10A | 106.2 |
| H2A—O2—H2B | 108 (3) | N2—C10—H10A | 106.2 |
| C2—C1—C6 | 119.0 (4) | C9—C10—H10B | 106.2 |
| C2—C1—C7 | 125.4 (4) | N2—C10—H10B | 106.2 |
| C6—C1—C7 | 115.6 (4) | H10A—C10—H10B | 106.4 |
| O1—C2—C3 | 119.0 (4) | N2—C11—H11A | 109.5 |
| O1—C2—C1 | 123.7 (3) | N2—C11—H11B | 109.5 |
| C3—C2—C1 | 117.2 (4) | H11A—C11—H11B | 109.5 |
| C4—C3—C2 | 122.0 (5) | N2—C11—H11C | 109.5 |
| C4—C3—H3 | 119.0 | H11A—C11—H11C | 109.5 |
| C2—C3—H3 | 119.0 | H11B—C11—H11C | 109.5 |
| C3—C4—C5 | 121.4 (5) | N2—C12—H12A | 109.5 |
| C3—C4—H4 | 119.3 | N2—C12—H12B | 109.5 |
| C5—C4—H4 | 119.3 | H12A—C12—H12B | 109.5 |
| C6—C5—C4 | 118.3 (5) | N2—C12—H12C | 109.5 |
| C6—C5—H5 | 120.8 | H12A—C12—H12C | 109.5 |
| C4—C5—H5 | 120.8 | H12B—C12—H12C | 109.5 |
| C5—C6—C1 | 122.0 (6) | C11'—N2'—C12' | 106.1 (19) |
| C5—C6—H6 | 119.0 | C11'—N2'—H2'A | 106.6 |
| C1—C6—H6 | 119.0 | C12'—N2'—H2'A | 106.6 |
| N1—C7—C1 | 126.2 (4) | N2'—C11'—H11D | 109.5 |
| N1—C7—H7 | 116.9 | N2'—C11'—H11E | 109.5 |
| C1—C7—H7 | 116.9 | H11D—C11'—H11E | 109.5 |
| C9—C8—N1 | 111.5 (4) | N2'—C11'—H11F | 109.5 |
| C9—C8—H8A | 109.3 | H11D—C11'—H11F | 109.5 |
| N1—C8—H8A | 109.3 | H11E—C11'—H11F | 109.5 |
| C9—C8—H8B | 109.3 | N2'—C12'—H12D | 109.5 |
| N1—C8—H8B | 109.3 | N2'—C12'—H12E | 109.5 |
| H8A—C8—H8B | 108.0 | H12D—C12'—H12E | 109.5 |
| C8—C9—C10 | 112.6 (4) | N2'—C12'—H12F | 109.5 |
| C8—C9—H9A | 109.1 | H12D—C12'—H12F | 109.5 |
| C10—C9—H9A | 109.1 | H12E—C12'—H12F | 109.5 |
| C8—C9—H9B | 109.1 |
| H··· | ||||
| N2'—H2'A···O1i | 0.91 | 1.88 | 2.762 (14) | 164 |
| N2—H2C···O1i | 0.91 | 1.87 | 2.773 (12) | 170 |
Selected bond lengths (Å)
| Zn1—O1 | 1.954 (3) |
| Zn1—N1 | 2.003 (4) |
| Zn1—Cl1 | 2.2182 (13) |
| Zn1—Cl2 | 2.2692 (18) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2′—H2′ | 0.91 | 1.88 | 2.762 (14) | 164 |
| N2—H2 | 0.91 | 1.87 | 2.773 (12) | 170 |
Symmetry code: (i) .