Literature DB >> 21203068

{(E)-2-[3-(Dimethyl-ammonio)propyl-iminometh-yl]phenolato}diiodidozinc(II).

Xue-Wen Zhu1, Xu-Zhao Yang.   

Abstract

The title complex, [ZnI(2)(C(12)H(18)N(2)O)], is a mononuclear zinc(II) compound derived from the zwitterionic form of the Schiff base (E)-2-[(3-dimethyl-amino-propyl-imino)meth-yl]phenol. The Zn(II) atom is four-coordinated by the imine N and phenolate O atoms of the Schiff base ligand, and by two iodide ions in a tetra-hedral coordination geometry. In the crystal structure, mol-ecules are linked through inter-molecular N-H⋯O hydrogen bonds, forming chains running along the b axis.

Entities:  

Year:  2008        PMID: 21203068      PMCID: PMC2961998          DOI: 10.1107/S1600536808023659

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the chemistry of Schiff base complexes, see: Ali et al. (2008 ▶); Biswas et al. (2008 ▶); Chen et al. (2008 ▶); Darensbourg & Frantz (2007 ▶); Habibi et al. (2007 ▶); Kawamoto et al. (2008 ▶); Lipscomb & Sträter (1996 ▶); Tomat et al. (2007 ▶); Wu et al. (2008 ▶); Yuan et al. (2007 ▶). For related structures, see: Qiu (2006a ▶,b ▶); Wei et al. (2007 ▶); Zhu et al. (2007 ▶).

Experimental

Crystal data

[ZnI2(C12H18N2O)] M = 525.45 Orthorhombic, a = 13.892 (3) Å b = 16.640 (2) Å c = 7.372 (3) Å V = 1704.1 (8) Å3 Z = 4 Mo Kα radiation μ = 5.06 mm−1 T = 298 (2) K 0.20 × 0.20 × 0.18 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.431, T max = 0.463 (expected range = 0.375–0.402) 12154 measured reflections 3669 independent reflections 3271 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.100 S = 1.04 3669 reflections 165 parameters 1 restraint H-atom parameters constrained Δρmax = 1.82 e Å−3 Δρmin = −0.47 e Å−3 Absolute structure: Flack (1983 ▶), 1660 Friedel pairs Flack parameter: 0.00 (4) Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808023659/sj2522sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808023659/sj2522Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[ZnI2(C12H18N2O)]F000 = 992
Mr = 525.45Dx = 2.048 Mg m3
Orthorhombic, Pna21Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 4125 reflections
a = 13.892 (3) Åθ = 2.4–25.0º
b = 16.640 (2) ŵ = 5.06 mm1
c = 7.372 (3) ÅT = 298 (2) K
V = 1704.1 (8) Å3Block, colorless
Z = 40.20 × 0.20 × 0.18 mm
Bruker APEXII CCD area-detector diffractometer3669 independent reflections
Radiation source: fine-focus sealed tube3271 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.048
T = 298(2) Kθmax = 27.0º
ω scansθmin = 1.9º
Absorption correction: multi-scan(SADABS; Sheldrick, 2004)h = −17→17
Tmin = 0.431, Tmax = 0.463k = −20→21
12154 measured reflectionsl = −9→9
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.043  w = 1/[σ2(Fo2) + (0.0426P)2 + 0.9395P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.100(Δ/σ)max = 0.001
S = 1.04Δρmax = 1.82 e Å3
3669 reflectionsΔρmin = −0.46 e Å3
165 parametersExtinction correction: none
1 restraintAbsolute structure: Flack (1983), 1660 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.00 (4)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.75194 (6)0.90239 (4)0.72869 (14)0.03631 (19)
I10.58993 (3)0.92236 (3)0.88834 (9)0.04992 (15)
I20.89258 (4)0.98333 (3)0.85716 (9)0.05741 (18)
N10.7294 (4)0.9228 (3)0.4634 (8)0.0379 (13)
N20.8361 (5)1.1716 (3)0.3321 (11)0.0544 (19)
H2A0.78571.20520.31060.065*
O10.7847 (4)0.7893 (3)0.6946 (7)0.0429 (12)
C10.8309 (5)0.7664 (4)0.5451 (11)0.0385 (16)
C20.8869 (6)0.6960 (5)0.5496 (14)0.053 (2)
H20.89230.66720.65730.063*
C30.9338 (6)0.6691 (5)0.396 (2)0.070 (3)
H30.97220.62340.40300.084*
C40.9256 (7)0.7066 (5)0.2392 (16)0.063 (3)
H40.95750.68650.13800.075*
C50.8701 (7)0.7758 (5)0.2225 (15)0.063 (2)
H50.86530.80190.11130.075*
C60.8209 (5)0.8061 (4)0.3760 (13)0.0422 (15)
C70.7648 (5)0.8782 (4)0.3445 (10)0.0389 (16)
H70.75420.89260.22430.047*
C80.6691 (5)0.9919 (4)0.4056 (12)0.0456 (19)
H8A0.60740.98890.46670.055*
H8B0.65740.98800.27610.055*
C90.7143 (6)1.0712 (4)0.4458 (11)0.0459 (19)
H9A0.73581.07210.57100.055*
H9B0.66681.11340.43050.055*
C100.7992 (6)1.0871 (4)0.3217 (13)0.049 (2)
H10A0.85101.05050.35310.059*
H10B0.78021.07580.19770.059*
C110.8730 (10)1.1894 (6)0.5117 (19)0.100 (5)
H11A0.91641.14760.54880.150*
H11B0.82051.19260.59600.150*
H11C0.90661.23980.50920.150*
C120.9089 (8)1.1848 (6)0.186 (2)0.101 (5)
H12A0.92691.24050.18340.151*
H12B0.88191.16990.07110.151*
H12C0.96481.15250.20990.151*
U11U22U33U12U13U23
Zn10.0426 (5)0.0328 (3)0.0335 (4)0.0041 (3)0.0026 (4)0.0028 (3)
I10.0415 (3)0.0491 (2)0.0591 (3)0.00396 (18)0.0126 (3)−0.0002 (3)
I20.0486 (3)0.0603 (3)0.0633 (4)−0.0039 (2)−0.0084 (3)−0.0062 (3)
N10.037 (3)0.042 (3)0.035 (3)−0.012 (2)−0.001 (3)−0.004 (3)
N20.048 (4)0.029 (3)0.086 (6)0.005 (3)−0.002 (4)0.007 (3)
O10.052 (3)0.032 (2)0.045 (3)0.008 (2)0.007 (3)0.006 (2)
C10.034 (4)0.033 (3)0.048 (5)−0.008 (3)0.005 (3)−0.002 (3)
C20.055 (5)0.040 (4)0.063 (6)0.008 (4)0.016 (4)0.005 (4)
C30.059 (5)0.040 (4)0.111 (9)0.008 (4)0.019 (7)−0.003 (6)
C40.063 (6)0.052 (5)0.073 (7)0.010 (4)0.028 (5)−0.016 (5)
C50.070 (6)0.063 (5)0.055 (6)0.001 (4)0.014 (5)−0.012 (5)
C60.040 (4)0.040 (3)0.046 (4)0.003 (3)0.008 (4)−0.004 (4)
C70.049 (4)0.044 (3)0.024 (4)0.001 (3)0.003 (3)0.001 (3)
C80.041 (4)0.045 (3)0.051 (5)0.001 (3)−0.004 (4)0.017 (4)
C90.051 (5)0.039 (4)0.047 (5)0.016 (3)−0.006 (4)0.005 (3)
C100.051 (5)0.027 (3)0.070 (6)0.005 (3)0.005 (4)0.006 (3)
C110.111 (10)0.054 (6)0.135 (11)−0.023 (6)−0.078 (9)0.026 (6)
C120.074 (7)0.052 (5)0.177 (15)0.007 (5)0.051 (8)0.028 (8)
Zn1—O11.952 (4)C5—C61.415 (12)
Zn1—N12.010 (6)C5—H50.9300
Zn1—I22.5550 (11)C6—C71.449 (9)
Zn1—I12.5615 (11)C7—H70.9300
N1—C71.250 (9)C8—C91.491 (10)
N1—C81.485 (9)C8—H8A0.9700
N2—C111.451 (14)C8—H8B0.9700
N2—C121.493 (15)C9—C101.516 (12)
N2—C101.498 (8)C9—H9A0.9700
N2—H2A0.9100C9—H9B0.9700
O1—C11.331 (9)C10—H10A0.9700
C1—C21.406 (10)C10—H10B0.9700
C1—C61.417 (12)C11—H11A0.9600
C2—C31.384 (15)C11—H11B0.9600
C2—H20.9300C11—H11C0.9600
C3—C41.317 (17)C12—H12A0.9600
C3—H30.9300C12—H12B0.9600
C4—C51.392 (12)C12—H12C0.9600
C4—H40.9300
O1—Zn1—N194.3 (2)N1—C7—C6126.2 (7)
O1—Zn1—I2112.17 (16)N1—C7—H7116.9
N1—Zn1—I2113.02 (16)C6—C7—H7116.9
O1—Zn1—I1112.90 (16)N1—C8—C9113.0 (6)
N1—Zn1—I1106.74 (18)N1—C8—H8A109.0
I2—Zn1—I1115.67 (4)C9—C8—H8A109.0
C7—N1—C8118.8 (7)N1—C8—H8B109.0
C7—N1—Zn1121.4 (5)C9—C8—H8B109.0
C8—N1—Zn1119.9 (5)H8A—C8—H8B107.8
C11—N2—C12112.8 (9)C8—C9—C10111.2 (6)
C11—N2—C10111.1 (7)C8—C9—H9A109.4
C12—N2—C10109.5 (8)C10—C9—H9A109.4
C11—N2—H2A107.8C8—C9—H9B109.4
C12—N2—H2A107.8C10—C9—H9B109.4
C10—N2—H2A107.8H9A—C9—H9B108.0
C1—O1—Zn1119.6 (4)N2—C10—C9113.5 (6)
O1—C1—C2119.0 (7)N2—C10—H10A108.9
O1—C1—C6123.2 (6)C9—C10—H10A108.9
C2—C1—C6117.6 (7)N2—C10—H10B108.9
C3—C2—C1120.7 (9)C9—C10—H10B108.9
C3—C2—H2119.6H10A—C10—H10B107.7
C1—C2—H2119.6N2—C11—H11A109.5
C4—C3—C2121.6 (8)N2—C11—H11B109.5
C4—C3—H3119.2H11A—C11—H11B109.5
C2—C3—H3119.2N2—C11—H11C109.5
C3—C4—C5121.2 (9)H11A—C11—H11C109.5
C3—C4—H4119.4H11B—C11—H11C109.5
C5—C4—H4119.4N2—C12—H12A109.5
C4—C5—C6119.5 (10)N2—C12—H12B109.5
C4—C5—H5120.3H12A—C12—H12B109.5
C6—C5—H5120.3N2—C12—H12C109.5
C5—C6—C1119.3 (7)H12A—C12—H12C109.5
C5—C6—C7115.2 (8)H12B—C12—H12C109.5
C1—C6—C7125.4 (7)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O1i0.911.912.772 (8)157
Zn1—O11.952 (4)
Zn1—N12.010 (6)
Zn1—I22.5550 (11)
Zn1—I12.5615 (11)
O1—Zn1—N194.3 (2)
O1—Zn1—I2112.17 (16)
N1—Zn1—I2113.02 (16)
O1—Zn1—I1112.90 (16)
N1—Zn1—I1106.74 (18)
I2—Zn1—I1115.67 (4)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O1i0.911.912.772 (8)157

Symmetry code: (i) .

  10 in total

1.  Recent Advances in Zinc Enzymology.

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Stabilization of a helical water chain in a metal-organic host of a trinuclear Schiff base complex.

Authors:  Chaitali Biswas; Michael G B Drew; Ashutosh Ghosh
Journal:  Inorg Chem       Date:  2008-05-06       Impact factor: 5.165

4.  Manganese(III) Schiff base complexes: chemistry relevant to the copolymerization of epoxides and carbon dioxide.

Authors:  Donald J Darensbourg; Eric B Frantz
Journal:  Inorg Chem       Date:  2007-06-19       Impact factor: 5.165

5.  Synthesis and characterization of luminescent zinc(II) and cadmium(II) complexes with N,S-chelating Schiff base ligands.

Authors:  Tatsuya Kawamoto; Masato Nishiwaki; Yasutaka Tsunekawa; Koichi Nozaki; Takumi Konno
Journal:  Inorg Chem       Date:  2008-03-18       Impact factor: 5.165

6.  Dichloridobis(2-{1-[2-(1H-indol-3-yl)ethyl-iminio]eth-yl}phenolate-κO)zinc(II)-2-{1-[2-(1H-indol-3-yl)ethyl-iminio]eth-yl}phenolate (1/2).

Authors:  Hapipah M Ali; Mohamed Ibrahim Mohamed Mustafa; Mohd Razali Rizal; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-26

7.  Azide-bridged one-dimensional Mn(III) polymers: effects of side group of Schiff base ligands on structure and magnetism.

Authors:  Mei Yuan; Fei Zhao; Wen Zhang; Zhe-Ming Wang; Song Gao
Journal:  Inorg Chem       Date:  2007-11-22       Impact factor: 5.165

8.  Coordination chemistry of a pi-extended, rigid and redox-active tetrathiafulvalene-fused Schiff-base ligand.

Authors:  Jin-Cai Wu; Shi-Xia Liu; Tony D Keene; Antonia Neels; Valeriu Mereacre; Annie K Powell; Silvio Decurtins
Journal:  Inorg Chem       Date:  2008-04-21       Impact factor: 5.165

9.  A bench-stable homodinuclear Ni2-Schiff base complex for catalytic asymmetric synthesis of alpha-tetrasubstituted anti-alpha,beta-diamino acid surrogates.

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Journal:  J Am Chem Soc       Date:  2008-01-29       Impact factor: 15.419

10.  Binuclear fluoro-bridged zinc and cadmium complexes of a schiff base expanded porphyrin: fluoride abstraction from the tetrafluoroborate anion.

Authors:  Elisa Tomat; Luciano Cuesta; Vincent M Lynch; Jonathan L Sessler
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  10 in total
  7 in total

1.  {4-Bromo-2-[2-(piperidin-1-ium-1yl)ethyl-iminometh-yl]phenolato}diiodido-zinc(II).

Authors:  Xue-Wen Zhu; Zhi-Gang Yin; Gang-Sen Li; Xu-Zhao Yang; Chun-Xia Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-19

2.  {4-Bromo-2-[3-(diethyl-ammonio)propyl-imino-meth-yl]phenolato}diiodidozinc(II) methanol solvate.

Authors:  Xue-Wen Zhu; Zhi-Gang Yin; Xu-Zhao Yang; Gang-Sen Li; Chun-Xia Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-03

3.  Diiodido{4-nitro-2-[2-(piperidin-1-yl)ethyl-imino-meth-yl]phenolato}zinc(II).

Authors:  Xue-Wen Zhu; Xu-Zhao Yang; Chun-Xia Zhang; Gang-Sen Li; Zhi-Gang Yin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-10

4.  Dichlorido{2-[3-(dimethyl-ammonio)-propyl-imino-meth-yl]phenolato}zinc(II) hemihydrate.

Authors:  Xue-Wen Zhu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-25

5.  {4-Bromo-2-[(2-morpholinoeth-yl)imino-meth-yl]phenolato}iodido(methanol)zinc(II).

Authors:  Cheng-Li Han
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-19

6.  Diiodido[N'-(2-methoxy-benzyl-idene)-N,N-dimethyl-ethane-1,2-diamine]zinc(II).

Authors:  Xue-Wen Zhu; Zhi-Gang Yin; Chun-Xia Zhang; Xu-Zhao Yang; Gang-Sen Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-19

7.  (Acetato-κO)(2-bromo-6-{[3-(dimethyl-aza-nium-yl)propyl-imino-κN]meth-yl}phenolato-κO)(thio-cyanato-κN)zinc.

Authors:  Cheng-Li Han
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-25
  7 in total

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