Literature DB >> 21578090

Diiodido{4-nitro-2-[2-(piperidin-1-yl)ethyl-imino-meth-yl]phenolato}zinc(II).

Xue-Wen Zhu1, Xu-Zhao Yang, Chun-Xia Zhang, Gang-Sen Li, Zhi-Gang Yin.   

Abstract

In the title complex, [ZnI(2)(C(14)H(19)N(3)O(3))], the Zn(II) atom is four-coordinated by the imine N and phenolate O atoms of the Schiff base ligand, and by two iodide ions in a distorted tetra-hedral coordination. In the crystal structure, mol-ecules are linked through inter-molecular N-H⋯O hydrogen bonds, forming dimers.

Entities:  

Year:  2009        PMID: 21578090      PMCID: PMC2971035          DOI: 10.1107/S1600536809040495

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the chemistry of Schiff base complexes, see: Ali et al. (2008 ▶); Biswas et al. (2008 ▶); Chen et al. (2008 ▶); Darensbourg & Frantz (2007 ▶); Habibi et al. (2007 ▶); Kawamoto et al. (2008 ▶); Lipscomb & Sträter (1996 ▶); Tomat et al. (2007 ▶); Wu et al. (2008 ▶); Yuan et al. (2007 ▶). For related structures see: Zhu (2008 ▶); Zhu & Yang (2008a ▶,b ▶,c ▶); Qiu (2006a ▶,b ▶); Wei et al. (2007 ▶); Zhu et al. (2007 ▶).

Experimental

Crystal data

[ZnI2(C14H19N3O3)] M = 596.49 Triclinic, a = 8.7467 (2) Å b = 10.7114 (3) Å c = 10.9541 (2) Å α = 89.553 (2)° β = 89.334 (2)° γ = 68.984 (2)° V = 957.94 (4) Å3 Z = 2 Mo Kα radiation μ = 4.52 mm−1 T = 298 K 0.20 × 0.20 × 0.18 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.465, T max = 0.497 5795 measured reflections 4034 independent reflections 2994 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.080 S = 1.01 4034 reflections 211 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.50 e Å−3 Δρmin = −0.62 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809040495/om2281sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809040495/om2281Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[ZnI2(C14H19N3O3)]Z = 2
Mr = 596.49F(000) = 568
Triclinic, P1Dx = 2.068 Mg m3
a = 8.7467 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.7114 (3) ÅCell parameters from 1800 reflections
c = 10.9541 (2) Åθ = 2.6–25.5°
α = 89.553 (2)°µ = 4.52 mm1
β = 89.334 (2)°T = 298 K
γ = 68.984 (2)°Block, colorless
V = 957.94 (4) Å30.20 × 0.20 × 0.18 mm
Bruker APEXII CCD area-detector diffractometer4034 independent reflections
Radiation source: fine-focus sealed tube2994 reflections with I > 2σ(I)
graphiteRint = 0.017
ω scansθmax = 27.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −11→10
Tmin = 0.465, Tmax = 0.497k = −11→13
5795 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080H atoms treated by a mixture of independent and constrained refinement
S = 1.01w = 1/[σ2(Fo2) + (0.0311P)2 + 0.4408P] where P = (Fo2 + 2Fc2)/3
4034 reflections(Δ/σ)max = 0.001
211 parametersΔρmax = 0.50 e Å3
1 restraintΔρmin = −0.62 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.38637 (6)0.75022 (5)0.70365 (5)0.04264 (14)
I10.26005 (4)1.00680 (3)0.70856 (3)0.06259 (13)
I20.68572 (4)0.65555 (4)0.63039 (4)0.07424 (14)
N10.2296 (4)0.7001 (4)0.5954 (3)0.0390 (8)
N20.2722 (4)0.8331 (3)0.2827 (3)0.0363 (8)
N30.0106 (4)0.3085 (3)0.8808 (3)0.0435 (9)
O10.3662 (4)0.6417 (3)0.8421 (3)0.0533 (8)
O2−0.0766 (4)0.3055 (3)0.7938 (3)0.0579 (9)
O30.0124 (4)0.2483 (3)0.9762 (3)0.0587 (9)
C10.1913 (5)0.5441 (4)0.7469 (3)0.0345 (9)
C20.2852 (5)0.5627 (4)0.8453 (4)0.0355 (9)
C30.2900 (5)0.4870 (4)0.9535 (4)0.0415 (10)
H30.35340.49541.01830.050*
C40.2054 (5)0.4026 (4)0.9657 (4)0.0393 (10)
H40.21040.35491.03770.047*
C50.1107 (5)0.3891 (4)0.8682 (3)0.0344 (9)
C60.1057 (5)0.4572 (4)0.7614 (4)0.0378 (9)
H60.04380.44540.69700.045*
C70.1648 (5)0.6156 (4)0.6312 (4)0.0378 (10)
H70.09340.59850.57740.045*
C80.1724 (5)0.7702 (5)0.4791 (4)0.0482 (11)
H8A0.11460.86470.49390.058*
H8B0.09750.73460.44050.058*
C90.3181 (5)0.7512 (5)0.3965 (4)0.0459 (11)
H9A0.39890.77580.44010.055*
H9B0.36760.65750.37480.055*
C100.2279 (6)0.9798 (4)0.3042 (4)0.0508 (12)
H10A0.32080.99590.33850.061*
H10B0.13801.01030.36260.061*
C110.1785 (6)1.0575 (5)0.1866 (4)0.0569 (13)
H11A0.15271.15190.20220.068*
H11B0.08091.04620.15530.068*
C120.3150 (6)1.0100 (5)0.0919 (4)0.0537 (12)
H12A0.27931.05820.01590.064*
H12B0.41001.02770.12000.064*
C130.3597 (7)0.8626 (5)0.0713 (4)0.0609 (14)
H13A0.45040.83170.01370.073*
H13B0.26720.84640.03620.073*
C140.4070 (6)0.7853 (5)0.1887 (4)0.0609 (14)
H14A0.43140.69110.17300.073*
H14B0.50520.79540.22010.073*
H20.183 (4)0.825 (5)0.250 (4)0.080*
U11U22U33U12U13U23
Zn10.0420 (3)0.0466 (3)0.0436 (3)−0.0209 (2)−0.0078 (2)0.0040 (2)
I10.0622 (2)0.0466 (2)0.0738 (3)−0.01273 (16)−0.01062 (18)−0.00726 (17)
I20.03816 (19)0.0782 (3)0.0974 (3)−0.00982 (18)−0.00365 (18)−0.0088 (2)
N10.0397 (19)0.047 (2)0.0332 (19)−0.0191 (17)−0.0049 (16)0.0070 (16)
N20.040 (2)0.039 (2)0.0326 (19)−0.0174 (16)−0.0002 (15)0.0030 (15)
N30.042 (2)0.037 (2)0.048 (2)−0.0101 (17)−0.0009 (18)0.0072 (17)
O10.065 (2)0.070 (2)0.0409 (17)−0.0426 (19)−0.0175 (15)0.0099 (16)
O20.068 (2)0.062 (2)0.060 (2)−0.0424 (19)−0.0181 (18)0.0107 (17)
O30.063 (2)0.055 (2)0.059 (2)−0.0233 (17)−0.0031 (17)0.0232 (17)
C10.033 (2)0.042 (2)0.026 (2)−0.0120 (18)−0.0035 (17)0.0023 (17)
C20.033 (2)0.040 (2)0.034 (2)−0.0144 (19)−0.0044 (17)0.0017 (18)
C30.039 (2)0.051 (3)0.032 (2)−0.013 (2)−0.0081 (18)0.0002 (19)
C40.038 (2)0.040 (2)0.032 (2)−0.0050 (19)0.0018 (18)0.0087 (18)
C50.037 (2)0.032 (2)0.033 (2)−0.0111 (18)−0.0016 (18)0.0033 (17)
C60.039 (2)0.040 (2)0.035 (2)−0.0142 (19)−0.0066 (18)0.0030 (18)
C70.038 (2)0.048 (3)0.029 (2)−0.017 (2)−0.0046 (18)0.0038 (19)
C80.048 (3)0.064 (3)0.036 (2)−0.025 (2)−0.006 (2)0.012 (2)
C90.046 (3)0.047 (3)0.042 (3)−0.013 (2)0.000 (2)0.012 (2)
C100.068 (3)0.041 (3)0.043 (3)−0.020 (2)0.006 (2)0.003 (2)
C110.063 (3)0.043 (3)0.056 (3)−0.008 (2)0.011 (3)0.012 (2)
C120.053 (3)0.062 (3)0.048 (3)−0.024 (3)0.003 (2)0.014 (2)
C130.071 (3)0.066 (4)0.044 (3)−0.022 (3)0.014 (3)0.005 (2)
C140.067 (3)0.049 (3)0.055 (3)−0.007 (3)0.025 (3)0.004 (2)
Zn1—O11.948 (3)C5—C61.367 (5)
Zn1—N12.037 (3)C6—H60.9300
Zn1—I22.5666 (6)C7—H70.9300
Zn1—I12.5690 (6)C8—C91.508 (6)
N1—C71.284 (5)C8—H8A0.9700
N1—C81.473 (5)C8—H8B0.9700
N2—C91.492 (5)C9—H9A0.9700
N2—C101.496 (5)C9—H9B0.9700
N2—C141.503 (5)C10—C111.509 (6)
N2—H20.89 (4)C10—H10A0.9700
N3—O31.220 (4)C10—H10B0.9700
N3—O21.235 (5)C11—C121.518 (6)
N3—C51.439 (5)C11—H11A0.9700
O1—C21.285 (5)C11—H11B0.9700
C1—C61.396 (6)C12—C131.502 (7)
C1—C21.420 (5)C12—H12A0.9700
C1—C71.452 (5)C12—H12B0.9700
C2—C31.423 (5)C13—C141.503 (7)
C3—C41.363 (6)C13—H13A0.9700
C3—H30.9300C13—H13B0.9700
C4—C51.398 (6)C14—H14A0.9700
C4—H40.9300C14—H14B0.9700
O1—Zn1—N194.96 (13)N1—C8—H8A109.9
O1—Zn1—I2107.27 (10)C9—C8—H8A109.9
N1—Zn1—I2113.81 (10)N1—C8—H8B109.9
O1—Zn1—I1121.56 (10)C9—C8—H8B109.9
N1—Zn1—I1102.97 (10)H8A—C8—H8B108.3
I2—Zn1—I1114.61 (2)N2—C9—C8112.2 (3)
C7—N1—C8117.3 (4)N2—C9—H9A109.2
C7—N1—Zn1121.3 (3)C8—C9—H9A109.2
C8—N1—Zn1121.0 (3)N2—C9—H9B109.2
C9—N2—C10113.3 (3)C8—C9—H9B109.2
C9—N2—C14110.7 (3)H9A—C9—H9B107.9
C10—N2—C14110.1 (3)N2—C10—C11110.8 (4)
C9—N2—H2111 (3)N2—C10—H10A109.5
C10—N2—H2105 (3)C11—C10—H10A109.5
C14—N2—H2107 (3)N2—C10—H10B109.5
O3—N3—O2122.8 (4)C11—C10—H10B109.5
O3—N3—C5119.6 (4)H10A—C10—H10B108.1
O2—N3—C5117.6 (3)C10—C11—C12110.9 (4)
C2—O1—Zn1126.5 (3)C10—C11—H11A109.5
C6—C1—C2119.3 (4)C12—C11—H11A109.5
C6—C1—C7114.7 (4)C10—C11—H11B109.5
C2—C1—C7125.8 (4)C12—C11—H11B109.5
O1—C2—C1124.3 (4)H11A—C11—H11B108.0
O1—C2—C3118.5 (4)C13—C12—C11109.5 (4)
C1—C2—C3117.2 (4)C13—C12—H12A109.8
C4—C3—C2122.4 (4)C11—C12—H12A109.8
C4—C3—H3118.8C13—C12—H12B109.8
C2—C3—H3118.8C11—C12—H12B109.8
C3—C4—C5119.0 (4)H12A—C12—H12B108.2
C3—C4—H4120.5C12—C13—C14111.2 (4)
C5—C4—H4120.5C12—C13—H13A109.4
C6—C5—C4120.6 (4)C14—C13—H13A109.4
C6—C5—N3118.8 (4)C12—C13—H13B109.4
C4—C5—N3120.5 (4)C14—C13—H13B109.4
C5—C6—C1121.4 (4)H13A—C13—H13B108.0
C5—C6—H6119.3N2—C14—C13111.4 (4)
C1—C6—H6119.3N2—C14—H14A109.3
N1—C7—C1126.9 (4)C13—C14—H14A109.3
N1—C7—H7116.5N2—C14—H14B109.3
C1—C7—H7116.5C13—C14—H14B109.3
N1—C8—C9109.1 (4)H14A—C14—H14B108.0
D—H···AD—HH···AD···AD—H···A
N2—H2···O2i0.89 (4)2.00 (3)2.777 (5)144 (5)
Zn1—O11.948 (3)
Zn1—N12.037 (3)
Zn1—I22.5666 (6)
Zn1—I12.5690 (6)
O1—Zn1—N194.96 (13)
O1—Zn1—I2107.27 (10)
N1—Zn1—I2113.81 (10)
O1—Zn1—I1121.56 (10)
N1—Zn1—I1102.97 (10)
I2—Zn1—I1114.61 (2)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O2i0.89 (4)2.00 (3)2.777 (5)144 (5)

Symmetry code: (i) .

  14 in total

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Authors:  Chaitali Biswas; Michael G B Drew; Ashutosh Ghosh
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2.  Synthesis and characterization of luminescent zinc(II) and cadmium(II) complexes with N,S-chelating Schiff base ligands.

Authors:  Tatsuya Kawamoto; Masato Nishiwaki; Yasutaka Tsunekawa; Koichi Nozaki; Takumi Konno
Journal:  Inorg Chem       Date:  2008-03-18       Impact factor: 5.165

3.  Dichlorido{2-[3-(dimethyl-ammonio)-propyl-imino-meth-yl]phenolato}zinc(II) hemihydrate.

Authors:  Xue-Wen Zhu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-25

4.  Dibromido[N-propyl-N'-(2-pyridylmethyl-idene)ethane-1,2-diamine]zinc(II).

Authors:  Xue-Wen Zhu; Xu-Zhao Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-31

5.  Dibromido{(E)-2-eth-oxy-6-[3-(methyl-ammonio)propyl-iminometh-yl]phenol-ato}zinc(II).

Authors:  Xue-Wen Zhu; Xu-Zhao Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-31

6.  Dichloridobis(2-{1-[2-(1H-indol-3-yl)ethyl-iminio]eth-yl}phenolate-κO)zinc(II)-2-{1-[2-(1H-indol-3-yl)ethyl-iminio]eth-yl}phenolate (1/2).

Authors:  Hapipah M Ali; Mohamed Ibrahim Mohamed Mustafa; Mohd Razali Rizal; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-26

7.  Azide-bridged one-dimensional Mn(III) polymers: effects of side group of Schiff base ligands on structure and magnetism.

Authors:  Mei Yuan; Fei Zhao; Wen Zhang; Zhe-Ming Wang; Song Gao
Journal:  Inorg Chem       Date:  2007-11-22       Impact factor: 5.165

8.  Coordination chemistry of a pi-extended, rigid and redox-active tetrathiafulvalene-fused Schiff-base ligand.

Authors:  Jin-Cai Wu; Shi-Xia Liu; Tony D Keene; Antonia Neels; Valeriu Mereacre; Annie K Powell; Silvio Decurtins
Journal:  Inorg Chem       Date:  2008-04-21       Impact factor: 5.165

9.  Binuclear fluoro-bridged zinc and cadmium complexes of a schiff base expanded porphyrin: fluoride abstraction from the tetrafluoroborate anion.

Authors:  Elisa Tomat; Luciano Cuesta; Vincent M Lynch; Jonathan L Sessler
Journal:  Inorg Chem       Date:  2007-07-14       Impact factor: 5.165

10.  {(E)-2-[3-(Dimethyl-ammonio)propyl-iminometh-yl]phenolato}diiodidozinc(II).

Authors:  Xue-Wen Zhu; Xu-Zhao Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-31
View more
  2 in total

1.  {2-Eth-oxy-6-[2-(piperidinium-1-yl)ethyl-imino-meth-yl]phenolato}diiodidozinc(II).

Authors:  Jing-Yan Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-21

2.  Dichlorido{2-[(2-isopropyl-ammonio-ethyl)imino-meth-yl]-5-methoxy-phenolato}zinc(II).

Authors:  Zhen-Quan Han; Yuan Wang; Shuang Han
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-31
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