Literature DB >> 21836916

Dichlorido(2-{[3-(morpholin-4-ium-4-yl)prop-yl]imino-meth-yl}phenolate)zinc.

Nurul Azimah Ikmal Hisham1, Hamid Khaledi, Hapipah Mohd Ali.   

Abstract

In the zwitterionic zinc title complex, [ZnCl(2)(n class="Disease">C(14)H(20)N(2)O(2))], the Zn(II) ion is four-coordinated in a distorted tetra-hedral geometry. The Schiff base ligand employs its phenolate O and imine N atoms to coordinate the metal atom in a bidentate mode. Two Cl atoms complete the tetra-hedral coordination environment. In the crystal, a pair of N-H⋯O hydrogen bonds connect the mol-ecules into a centrosymmetric dimer. C-H⋯O, C-H⋯Cl and C-H⋯π inter-actions are also observed.

Entities:  

Year:  2011        PMID: 21836916      PMCID: PMC3151802          DOI: 10.1107/S1600536811022021

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures of similar zwitterionic ZnCl2 complexes, see: Qiu (2006 ▶); Ye & You (2008 ▶); Zhu (2008 ▶).

Experimental

Crystal data

[ZnCl2(C14H20N2O2)] M = 384.59 Monoclinic, a = 8.11276 (10) Å b = 11.21021 (13) Å c = 18.4097 (2) Å β = 92.0168 (6)° V = 1673.24 (4) Å3 Z = 4 Mo Kα radiation μ = 1.79 mm−1 T = 100 K 0.37 × 0.32 × 0.25 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.557, T max = 0.663 14420 measured reflections 3824 independent reflections 3557 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.020 wR(F 2) = 0.051 S = 1.07 3824 reflections 193 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.34 e Å−3 Δρmin = −0.33 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAIn class="Chemical">NT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811022021/is2701sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811022021/is2701Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[ZnCl2(C14H20N2O2)]F(000) = 792
Mr = 384.59Dx = 1.527 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9373 reflections
a = 8.11276 (10) Åθ = 2.2–30.4°
b = 11.21021 (13) ŵ = 1.79 mm1
c = 18.4097 (2) ÅT = 100 K
β = 92.0168 (6)°Block, yellow
V = 1673.24 (4) Å30.37 × 0.32 × 0.25 mm
Z = 4
Bruker APEXII CCD diffractometer3824 independent reflections
Radiation source: fine-focus sealed tube3557 reflections with I > 2σ(I)
graphiteRint = 0.017
φ and ω scansθmax = 27.5°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.557, Tmax = 0.663k = −14→14
14420 measured reflectionsl = −23→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.020Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.051H atoms treated by a mixture of independent and constrained refinement
S = 1.07w = 1/[σ2(Fo2) + (0.0237P)2 + 0.6991P] where P = (Fo2 + 2Fc2)/3
3824 reflections(Δ/σ)max = 0.003
193 parametersΔρmax = 0.34 e Å3
1 restraintΔρmin = −0.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.187917 (17)0.093296 (13)1.107214 (8)0.01475 (5)
Cl10.22466 (4)−0.09919 (3)1.084342 (19)0.02075 (8)
Cl20.33968 (4)0.15593 (3)1.205005 (18)0.01907 (7)
O1−0.04186 (11)0.13291 (8)1.12739 (5)0.01608 (18)
O20.13093 (14)−0.02283 (10)0.65039 (5)0.0276 (2)
N10.20412 (13)0.20247 (10)1.02150 (6)0.0159 (2)
N20.16476 (13)0.05293 (10)0.79901 (6)0.0135 (2)
H2N0.1344 (19)−0.0140 (12)0.8218 (8)0.016*
C1−0.12380 (15)0.22475 (11)1.09867 (7)0.0137 (2)
C2−0.28113 (16)0.25169 (12)1.12420 (7)0.0163 (2)
H2−0.32530.20321.16110.020*
C3−0.37327 (16)0.34666 (12)1.09714 (7)0.0186 (3)
H3−0.47870.36271.11580.022*
C4−0.31222 (17)0.41883 (12)1.04277 (8)0.0196 (3)
H4−0.37430.48491.02470.024*
C5−0.16034 (17)0.39287 (12)1.01564 (7)0.0173 (3)
H5−0.12030.44050.97740.021*
C6−0.06264 (15)0.29814 (11)1.04276 (7)0.0142 (2)
C70.09231 (16)0.28065 (11)1.00702 (7)0.0159 (2)
H70.11340.33360.96820.019*
C80.34713 (16)0.19638 (13)0.97446 (7)0.0194 (3)
H8A0.44730.17691.00440.023*
H8B0.36410.27530.95180.023*
C90.32253 (16)0.10212 (12)0.91483 (7)0.0170 (3)
H9A0.42960.08470.89290.020*
H9B0.28120.02740.93630.020*
C100.20034 (15)0.14566 (11)0.85628 (7)0.0152 (2)
H10A0.09600.16820.87900.018*
H10B0.24520.21780.83310.018*
C110.02330 (16)0.09176 (11)0.74944 (7)0.0171 (3)
H11A0.05090.16790.72550.020*
H11B−0.07630.10450.77800.020*
C12−0.01012 (18)−0.00338 (13)0.69264 (7)0.0224 (3)
H12A−0.0405−0.07870.71680.027*
H12B−0.10420.02140.66040.027*
C130.26442 (19)−0.06439 (14)0.69587 (8)0.0253 (3)
H13A0.3610−0.08010.66590.030*
H13B0.2328−0.14030.71900.030*
C140.31118 (16)0.02596 (12)0.75431 (7)0.0180 (3)
H14A0.4018−0.00620.78600.022*
H14B0.35050.10020.73150.022*
U11U22U33U12U13U23
Zn10.01268 (8)0.01573 (8)0.01592 (9)0.00041 (5)0.00142 (6)−0.00096 (5)
Cl10.01746 (15)0.01744 (15)0.02752 (17)0.00001 (11)0.00307 (13)−0.00615 (12)
Cl20.01577 (14)0.02111 (16)0.02017 (16)0.00145 (11)−0.00147 (11)−0.00506 (12)
O10.0137 (4)0.0163 (4)0.0184 (5)0.0015 (3)0.0024 (3)0.0039 (4)
O20.0390 (6)0.0322 (6)0.0117 (5)0.0108 (5)0.0007 (4)−0.0017 (4)
N10.0148 (5)0.0191 (5)0.0140 (5)−0.0042 (4)0.0023 (4)−0.0036 (4)
N20.0153 (5)0.0139 (5)0.0114 (5)0.0016 (4)0.0022 (4)0.0009 (4)
C10.0147 (6)0.0137 (6)0.0127 (6)−0.0014 (4)−0.0014 (4)−0.0014 (4)
C20.0153 (6)0.0170 (6)0.0165 (6)−0.0005 (5)0.0010 (5)0.0012 (5)
C30.0137 (6)0.0202 (6)0.0219 (7)0.0011 (5)−0.0010 (5)−0.0014 (5)
C40.0192 (6)0.0171 (6)0.0220 (7)0.0014 (5)−0.0066 (5)0.0019 (5)
C50.0219 (6)0.0165 (6)0.0134 (6)−0.0039 (5)−0.0035 (5)0.0008 (5)
C60.0164 (6)0.0139 (6)0.0121 (6)−0.0019 (4)−0.0007 (5)−0.0016 (4)
C70.0205 (6)0.0157 (6)0.0117 (6)−0.0056 (5)0.0011 (5)−0.0013 (5)
C80.0141 (6)0.0269 (7)0.0173 (6)−0.0057 (5)0.0035 (5)−0.0040 (5)
C90.0135 (6)0.0222 (7)0.0154 (6)0.0004 (5)0.0008 (5)−0.0025 (5)
C100.0165 (6)0.0150 (6)0.0142 (6)0.0001 (5)0.0018 (5)−0.0019 (5)
C110.0183 (6)0.0189 (6)0.0138 (6)0.0042 (5)−0.0017 (5)0.0014 (5)
C120.0284 (7)0.0240 (7)0.0143 (6)0.0020 (6)−0.0042 (5)0.0000 (5)
C130.0333 (8)0.0257 (7)0.0169 (7)0.0105 (6)0.0037 (6)−0.0020 (5)
C140.0199 (6)0.0194 (6)0.0153 (6)0.0055 (5)0.0065 (5)0.0020 (5)
Zn1—O11.9644 (9)C5—H50.9500
Zn1—N12.0049 (11)C6—C71.4526 (18)
Zn1—Cl12.2206 (3)C7—H70.9500
Zn1—Cl22.2570 (3)C8—C91.5318 (18)
O1—C11.3254 (15)C8—H8A0.9900
O2—C121.4230 (17)C8—H8B0.9900
O2—C131.4238 (18)C9—C101.5190 (18)
N1—C71.2825 (17)C9—H9A0.9900
N1—C81.4736 (16)C9—H9B0.9900
N2—C141.4995 (16)C10—H10A0.9900
N2—C101.5012 (16)C10—H10B0.9900
N2—C111.5052 (16)C11—C121.5114 (18)
N2—H2N0.898 (13)C11—H11A0.9900
C1—C21.4084 (17)C11—H11B0.9900
C1—C61.4206 (17)C12—H12A0.9900
C2—C31.3836 (18)C12—H12B0.9900
C2—H20.9500C13—C141.516 (2)
C3—C41.392 (2)C13—H13A0.9900
C3—H30.9500C13—H13B0.9900
C4—C51.377 (2)C14—H14A0.9900
C4—H40.9500C14—H14B0.9900
C5—C61.4062 (18)
O1—Zn1—N195.72 (4)C9—C8—H8A109.3
O1—Zn1—Cl1112.96 (3)N1—C8—H8B109.3
N1—Zn1—Cl1115.53 (3)C9—C8—H8B109.3
O1—Zn1—Cl2105.87 (3)H8A—C8—H8B108.0
N1—Zn1—Cl2112.88 (3)C10—C9—C8110.63 (11)
Cl1—Zn1—Cl2112.363 (13)C10—C9—H9A109.5
C1—O1—Zn1124.48 (8)C8—C9—H9A109.5
C12—O2—C13109.77 (10)C10—C9—H9B109.5
C7—N1—C8118.38 (11)C8—C9—H9B109.5
C7—N1—Zn1121.01 (9)H9A—C9—H9B108.1
C8—N1—Zn1120.60 (9)N2—C10—C9112.36 (10)
C14—N2—C10112.86 (10)N2—C10—H10A109.1
C14—N2—C11109.11 (10)C9—C10—H10A109.1
C10—N2—C11110.44 (10)N2—C10—H10B109.1
C14—N2—H2N108.8 (10)C9—C10—H10B109.1
C10—N2—H2N107.5 (10)H10A—C10—H10B107.9
C11—N2—H2N108.0 (10)N2—C11—C12109.25 (10)
O1—C1—C2118.76 (11)N2—C11—H11A109.8
O1—C1—C6123.77 (11)C12—C11—H11A109.8
C2—C1—C6117.47 (11)N2—C11—H11B109.8
C3—C2—C1121.96 (12)C12—C11—H11B109.8
C3—C2—H2119.0H11A—C11—H11B108.3
C1—C2—H2119.0O2—C12—C11110.99 (12)
C2—C3—C4120.32 (13)O2—C12—H12A109.4
C2—C3—H3119.8C11—C12—H12A109.4
C4—C3—H3119.8O2—C12—H12B109.4
C5—C4—C3118.93 (12)C11—C12—H12B109.4
C5—C4—H4120.5H12A—C12—H12B108.0
C3—C4—H4120.5O2—C13—C14111.40 (11)
C4—C5—C6122.09 (12)O2—C13—H13A109.3
C4—C5—H5119.0C14—C13—H13A109.3
C6—C5—H5119.0O2—C13—H13B109.3
C5—C6—C1119.19 (12)C14—C13—H13B109.3
C5—C6—C7115.28 (12)H13A—C13—H13B108.0
C1—C6—C7125.44 (12)N2—C14—C13109.93 (11)
N1—C7—C6127.96 (12)N2—C14—H14A109.7
N1—C7—H7116.0C13—C14—H14A109.7
C6—C7—H7116.0N2—C14—H14B109.7
N1—C8—C9111.57 (10)C13—C14—H14B109.7
N1—C8—H8A109.3H14A—C14—H14B108.2
Cg1 is the centroid of the C1–C6 ring.
D—H···AD—HH···AD···AD—H···A
N2—H2N···O1i0.90 (1)1.81 (1)2.6954 (14)170.(2)
C5—H5···O2ii0.952.393.2161 (16)146
C9—H9A···Cl1iii0.992.833.6732 (13)144
C10—H10A···Cl1i0.992.823.6905 (13)147
C14—H14A···Cl2iii0.992.693.5486 (13)146
C14—H14B···Cl2iv0.992.783.6890 (14)153
C12—H12B···Cg1v0.992.573.43663 (15)146
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2N⋯O1i0.90 (1)1.81 (1)2.6954 (14)170 (2)
C5—H5⋯O2ii0.952.393.2161 (16)146
C9—H9A⋯Cl1iii0.992.833.6732 (13)144
C10—H10A⋯Cl1i0.992.823.6905 (13)147
C14—H14A⋯Cl2iii0.992.693.5486 (13)146
C14—H14B⋯Cl2iv0.992.783.6890 (14)153
C12—H12BCg1v0.992.573.4366 (2)146

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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