Literature DB >> 21203071

Bis{(E)-2-eth-oxy-6-[2-(ethyl-ammonio)ethyl-iminometh-yl]phenolato}nickel(II) bis(perchlorate).

Xue-Wen Zhu1, Xu-Zhao Yang.   

Abstract

In the title centrosymmetric mononuclear nickel(II) complex, [Ni(C(13)H(20)N(2)O(2))(2)](ClO(4))(2), the Ni(II) atom is four-coordinated by the imine N and phenolate O atoms of the zwitterionic forms of two Schiff base ligands in a square-planar coordination geometry. In the crystal structure, mol-ecules are linked through inter-molecular N-H⋯O hydrogen bonds, forming chains running along the a axis.

Entities:  

Year:  2008        PMID: 21203071      PMCID: PMC2962001          DOI: 10.1107/S1600536808023684

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the chemistry of the Schiff base complexes, see: Ali et al. (2008 ▶); Biswas et al. (2008 ▶); Carlsson et al. (2002 ▶, 2004 ▶); Chen et al. (2008 ▶); Darensbourg & Frantz (2007 ▶); Habibi et al. (2007 ▶); Kawamoto et al. (2008 ▶); Tomat et al. (2007 ▶); Wu et al. (2008 ▶); Yuan et al. (2007 ▶). For related structures, see: Ma et al. (2008 ▶); Skovsgaard et al. (2005 ▶); Zhao (2007 ▶).

Experimental

Crystal data

[Ni(C13H20N2O2)2](ClO4)2 M = 730.23 Monoclinic, a = 8.386 (3) Å b = 8.566 (3) Å c = 21.862 (6) Å β = 99.068 (4)° V = 1550.8 (9) Å3 Z = 2 Mo Kα radiation μ = 0.87 mm−1 T = 298 (2) K 0.23 × 0.20 × 0.20 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.826, T max = 0.846 12509 measured reflections 3363 independent reflections 2770 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.102 S = 1.04 3363 reflections 207 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.34 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808023684/sj2526sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808023684/sj2526Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C13H20N2O2)2](ClO4)2F000 = 764
Mr = 730.23Dx = 1.564 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3252 reflections
a = 8.386 (3) Åθ = 2.5–25.4º
b = 8.566 (3) ŵ = 0.87 mm1
c = 21.862 (6) ÅT = 298 (2) K
β = 99.068 (4)ºBlock, red
V = 1550.8 (9) Å30.23 × 0.20 × 0.20 mm
Z = 2
Bruker APEXII CCD area-detector diffractometer3363 independent reflections
Radiation source: fine-focus sealed tube2770 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.041
T = 298(2) Kθmax = 27.0º
ω scansθmin = 1.9º
Absorption correction: multi-scan(SADABS; Sheldrick, 2004)h = −10→10
Tmin = 0.826, Tmax = 0.846k = −10→10
12509 measured reflectionsl = −27→27
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.039H-atom parameters constrained
wR(F2) = 0.102  w = 1/[σ2(Fo2) + (0.0512P)2 + 0.4599P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
3363 reflectionsΔρmax = 0.28 e Å3
207 parametersΔρmin = −0.34 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni11.00000.50000.00000.02592 (13)
Cl10.39043 (7)0.71469 (7)0.09059 (3)0.03882 (17)
O11.06353 (18)0.41002 (18)0.07614 (7)0.0333 (4)
O21.1550 (2)0.2125 (2)0.16406 (8)0.0451 (4)
O30.4539 (3)0.6169 (2)0.04665 (9)0.0624 (6)
O40.5075 (2)0.8315 (2)0.11174 (9)0.0547 (5)
O50.3594 (3)0.6194 (2)0.14062 (9)0.0652 (6)
O60.2480 (3)0.7874 (3)0.06108 (13)0.0790 (7)
N10.8973 (2)0.6697 (2)0.03503 (8)0.0272 (4)
N20.6314 (2)0.7051 (2)−0.07021 (9)0.0342 (4)
H2A0.60310.6259−0.04710.041*
H2B0.71390.6718−0.08860.041*
C10.8960 (3)0.5512 (3)0.13583 (10)0.0307 (5)
C21.0022 (3)0.4303 (3)0.12705 (9)0.0281 (5)
C31.0473 (3)0.3232 (3)0.17637 (10)0.0322 (5)
C40.9828 (3)0.3361 (3)0.22998 (10)0.0385 (6)
H41.01090.26400.26160.046*
C50.8759 (3)0.4560 (3)0.23756 (11)0.0436 (6)
H50.83270.46340.27410.052*
C60.8344 (3)0.5623 (3)0.19183 (11)0.0399 (6)
H60.76440.64330.19760.048*
C70.8602 (3)0.6692 (3)0.09004 (10)0.0308 (5)
H70.80360.75550.10100.037*
C80.8632 (3)0.8182 (2)0.00079 (11)0.0317 (5)
H8A0.93080.8242−0.03130.038*
H8B0.89230.90440.02910.038*
C90.6887 (3)0.8363 (3)−0.02871 (11)0.0333 (5)
H9A0.62190.84360.00360.040*
H9B0.67650.9328−0.05220.040*
C100.4917 (3)0.7422 (3)−0.11922 (13)0.0487 (7)
H10A0.52450.8215−0.14640.058*
H10B0.46290.6493−0.14390.058*
C110.3475 (3)0.7982 (4)−0.09446 (14)0.0568 (8)
H11A0.31520.7211−0.06700.085*
H11B0.26100.8158−0.12810.085*
H11C0.37280.8940−0.07230.085*
C121.1937 (3)0.0850 (3)0.20663 (12)0.0465 (6)
H12A1.21100.12550.24860.056*
H12B1.29370.03720.19920.056*
C131.0661 (5)−0.0355 (4)0.2011 (2)0.0790 (11)
H13A0.96900.00910.21160.119*
H13B1.1007−0.12010.22880.119*
H13C1.0458−0.07370.15930.119*
U11U22U33U12U13U23
Ni10.0286 (2)0.0257 (2)0.0236 (2)0.00323 (15)0.00463 (15)0.00429 (15)
Cl10.0470 (4)0.0310 (3)0.0392 (3)−0.0058 (2)0.0091 (3)−0.0041 (2)
O10.0407 (9)0.0352 (9)0.0255 (7)0.0112 (7)0.0096 (7)0.0078 (6)
O20.0555 (11)0.0445 (10)0.0376 (9)0.0190 (8)0.0145 (8)0.0175 (8)
O30.1038 (17)0.0375 (10)0.0533 (12)−0.0086 (11)0.0357 (11)−0.0095 (9)
O40.0541 (12)0.0456 (11)0.0639 (13)−0.0157 (9)0.0075 (9)−0.0132 (9)
O50.1053 (17)0.0525 (12)0.0438 (11)−0.0208 (12)0.0300 (11)−0.0021 (9)
O60.0493 (13)0.0656 (14)0.116 (2)−0.0016 (11)−0.0058 (12)0.0108 (14)
N10.0264 (9)0.0250 (9)0.0292 (9)−0.0002 (7)0.0015 (7)0.0020 (7)
N20.0319 (10)0.0294 (10)0.0408 (11)0.0026 (8)0.0038 (8)−0.0007 (8)
C10.0301 (11)0.0345 (12)0.0277 (11)−0.0006 (9)0.0048 (9)−0.0003 (9)
C20.0290 (11)0.0310 (11)0.0244 (10)−0.0028 (9)0.0043 (9)0.0013 (9)
C30.0323 (12)0.0354 (12)0.0284 (11)−0.0017 (10)0.0030 (9)0.0047 (9)
C40.0413 (14)0.0464 (14)0.0271 (11)−0.0036 (11)0.0034 (10)0.0079 (10)
C50.0465 (15)0.0580 (16)0.0288 (12)0.0011 (13)0.0132 (11)0.0006 (11)
C60.0391 (13)0.0466 (14)0.0356 (13)0.0061 (11)0.0107 (10)−0.0031 (11)
C70.0292 (11)0.0299 (12)0.0333 (12)0.0024 (9)0.0048 (9)−0.0033 (9)
C80.0359 (12)0.0224 (11)0.0362 (12)−0.0029 (9)0.0033 (10)0.0010 (9)
C90.0374 (13)0.0232 (11)0.0387 (12)0.0043 (9)0.0042 (10)0.0019 (9)
C100.0474 (15)0.0519 (16)0.0429 (14)−0.0002 (13)−0.0052 (12)0.0011 (12)
C110.0354 (14)0.0620 (19)0.068 (2)−0.0005 (13)−0.0059 (13)0.0023 (15)
C120.0508 (16)0.0441 (15)0.0445 (14)0.0123 (12)0.0072 (12)0.0191 (12)
C130.078 (2)0.0510 (19)0.107 (3)−0.0058 (18)0.011 (2)0.010 (2)
Ni1—O1i1.836 (2)C4—H40.9300
Ni1—O11.836 (2)C5—C61.357 (4)
Ni1—N1i1.910 (2)C5—H50.9300
Ni1—N11.910 (2)C6—H60.9300
Cl1—O61.410 (2)C7—H70.9300
Cl1—O51.421 (2)C8—C91.512 (3)
Cl1—O41.4268 (18)C8—H8A0.9700
Cl1—O31.4384 (19)C8—H8B0.9700
O1—C21.309 (2)C9—H9A0.9700
O2—C31.365 (3)C9—H9B0.9700
O2—C121.439 (3)C10—C111.481 (4)
N1—C71.289 (3)C10—H10A0.9700
N1—C81.481 (3)C10—H10B0.9700
N2—C91.476 (3)C11—H11A0.9600
N2—C101.492 (3)C11—H11B0.9600
N2—H2A0.9000C11—H11C0.9600
N2—H2B0.9000C12—C131.478 (4)
C1—C21.399 (3)C12—H12A0.9700
C1—C61.405 (3)C12—H12B0.9700
C1—C71.421 (3)C13—H13A0.9600
C2—C31.421 (3)C13—H13B0.9600
C3—C41.370 (3)C13—H13C0.9600
C4—C51.390 (4)
O1i—Ni1—O1180.0C1—C6—H6119.7
O1i—Ni1—N1i92.33 (7)N1—C7—C1127.2 (2)
O1—Ni1—N1i87.67 (7)N1—C7—H7116.4
O1i—Ni1—N187.67 (7)C1—C7—H7116.4
O1—Ni1—N192.33 (7)N1—C8—C9113.63 (18)
N1i—Ni1—N1180.0N1—C8—H8A108.8
O6—Cl1—O5111.19 (15)C9—C8—H8A108.8
O6—Cl1—O4109.16 (13)N1—C8—H8B108.8
O5—Cl1—O4110.69 (13)C9—C8—H8B108.8
O6—Cl1—O3109.13 (15)H8A—C8—H8B107.7
O5—Cl1—O3108.15 (12)N2—C9—C8112.54 (18)
O4—Cl1—O3108.46 (13)N2—C9—H9A109.1
C2—O1—Ni1128.20 (14)C8—C9—H9A109.1
C3—O2—C12119.27 (19)N2—C9—H9B109.1
C7—N1—C8114.76 (18)C8—C9—H9B109.1
C7—N1—Ni1124.19 (15)H9A—C9—H9B107.8
C8—N1—Ni1120.95 (14)C11—C10—N2113.6 (2)
C9—N2—C10114.96 (19)C11—C10—H10A108.8
C9—N2—H2A108.5N2—C10—H10A108.8
C10—N2—H2A108.5C11—C10—H10B108.8
C9—N2—H2B108.5N2—C10—H10B108.8
C10—N2—H2B108.5H10A—C10—H10B107.7
H2A—N2—H2B107.5C10—C11—H11A109.5
C2—C1—C6119.9 (2)C10—C11—H11B109.5
C2—C1—C7119.90 (19)H11A—C11—H11B109.5
C6—C1—C7120.0 (2)C10—C11—H11C109.5
O1—C2—C1123.96 (19)H11A—C11—H11C109.5
O1—C2—C3117.8 (2)H11B—C11—H11C109.5
C1—C2—C3118.25 (19)O2—C12—C13113.0 (2)
O2—C3—C4126.0 (2)O2—C12—H12A109.0
O2—C3—C2113.84 (19)C13—C12—H12A109.0
C4—C3—C2120.2 (2)O2—C12—H12B109.0
C3—C4—C5120.7 (2)C13—C12—H12B109.0
C3—C4—H4119.7H12A—C12—H12B107.8
C5—C4—H4119.7C12—C13—H13A109.5
C6—C5—C4120.2 (2)C12—C13—H13B109.5
C6—C5—H5119.9H13A—C13—H13B109.5
C4—C5—H5119.9C12—C13—H13C109.5
C5—C6—C1120.7 (2)H13A—C13—H13C109.5
C5—C6—H6119.7H13B—C13—H13C109.5
D—H···AD—HH···AD···AD—H···A
N2—H2B···O2i0.902.343.013 (3)131
N2—H2B···O1i0.901.972.764 (2)146
N2—H2A···O30.902.563.242 (3)132
N2—H2A···O3ii0.902.132.916 (3)145
Ni1—O11.836 (2)
Ni1—N11.910 (2)
O1i—Ni1—O1180
O1i—Ni1—N187.67 (7)
O1—Ni1—N192.33 (7)
N1i—Ni1—N1180

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2B⋯O2i0.902.343.013 (3)131
N2—H2B⋯O1i0.901.972.764 (2)146
N2—H2A⋯O30.902.563.242 (3)132
N2—H2A⋯O3ii0.902.132.916 (3)145

Symmetry codes: (i) ; (ii) .

  12 in total

1.  Hydrolytically active tetranuclear nickel complexes with structural resemblance to the active site of urease.

Authors:  Håkan Carlsson; Matti Haukka; Ebbe Nordlander
Journal:  Inorg Chem       Date:  2002-10-07       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Stabilization of a helical water chain in a metal-organic host of a trinuclear Schiff base complex.

Authors:  Chaitali Biswas; Michael G B Drew; Ashutosh Ghosh
Journal:  Inorg Chem       Date:  2008-05-06       Impact factor: 5.165

4.  Nickel complexes of carboxylate-containing polydentate ligands as models for the active site of urease.

Authors:  Håkan Carlsson; Matti Haukka; Azzedine Bousseksou; Jean-Marc Latour; Ebbe Nordlander
Journal:  Inorg Chem       Date:  2004-12-27       Impact factor: 5.165

5.  Synthesis and characterization of luminescent zinc(II) and cadmium(II) complexes with N,S-chelating Schiff base ligands.

Authors:  Tatsuya Kawamoto; Masato Nishiwaki; Yasutaka Tsunekawa; Koichi Nozaki; Takumi Konno
Journal:  Inorg Chem       Date:  2008-03-18       Impact factor: 5.165

6.  Bis{2-[2-(isopropyl-ammonio)ethyl-imino-meth-yl]-6-methoxy-phenolato}nickel(II) dithio-cyanate.

Authors:  Hong-Bo Ma; Yan-Xia Jiang; Jun-Tao Lei
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-03-29

7.  Dichloridobis(2-{1-[2-(1H-indol-3-yl)ethyl-iminio]eth-yl}phenolate-κO)zinc(II)-2-{1-[2-(1H-indol-3-yl)ethyl-iminio]eth-yl}phenolate (1/2).

Authors:  Hapipah M Ali; Mohamed Ibrahim Mohamed Mustafa; Mohd Razali Rizal; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-26

8.  Azide-bridged one-dimensional Mn(III) polymers: effects of side group of Schiff base ligands on structure and magnetism.

Authors:  Mei Yuan; Fei Zhao; Wen Zhang; Zhe-Ming Wang; Song Gao
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9.  Coordination chemistry of a pi-extended, rigid and redox-active tetrathiafulvalene-fused Schiff-base ligand.

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10.  Binuclear fluoro-bridged zinc and cadmium complexes of a schiff base expanded porphyrin: fluoride abstraction from the tetrafluoroborate anion.

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  1 in total

1.  Dichlorido{2-[3-(dimethyl-ammonio)-propyl-imino-meth-yl]phenolato}zinc(II) hemihydrate.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-25
  1 in total

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