Literature DB >> 21580184

2-[2-(4-Methoxyphenyl)-2,3-dihydro-1H-1,5-benzodiazepin-4-yl]phenol.

Yvon Bibila Mayaya Bisseyou, Ané Adjou, Yapi Marcellin Yapo, Guy Euloge Bany, R C A Kakou-Yao.   

Abstract

In the structure of title compound, C(22)H(20)O(2)N(2), the 11-membered benzodiazepine ring system adopts a distorted boat conformation. The benzene ring of this system forms dihedral angles of 89.69 (12) and 48.82 (12)° with those of the phenol and methoxy-phenyl substituents, respectively. The dihedral angle between the benzene rings is 49.61 (11)°. An intra-molecular O-H⋯N hydrogen bond generates an S(6) ring.

Entities:  

Year:  2009        PMID: 21580184      PMCID: PMC2980025          DOI: 10.1107/S1600536809052258

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of heterocyclic scaffolds containing nitro­gen atoms, see: MacDonald (2002 ▶); Gringauz (1999 ▶); Albright et al. (1998 ▶); Rahbaek et al. (1999 ▶). For related structures, see: Ravichandran et al. (2009a ▶,b ▶,c ▶,d ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the weighting scheme, see: Prince (1982 ▶); Watkin (1994 ▶).

Experimental

Crystal data

C22H20N2O2 M = 344.41 Monoclinic, a = 27.5064 (5) Å b = 7.3811 (2) Å c = 19.5038 (4) Å β = 117.699 (2)° V = 3506.02 (15) Å3 Z = 8 Mo Kα radiation μ = 0.08 mm−1 T = 223 K 0.30 × 0.20 × 0.15 mm

Data collection

Nonius KappaCCD diffractometer 19187 measured reflections 2507 independent reflections 2836 reflections with I > 3σ(I) R int = 0.06

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.065 S = 1.04 2507 reflections 235 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.25 e Å−3 Data collection: COLLECT (Nonius, 2001 ▶); cell refinement: DENZO/SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: CRYSTALS. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809052258/bq2181sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809052258/bq2181Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H20N2O2F(000) = 1456
Mr = 344.41Dx = 1.305 Mg m3
Monoclinic, C2/cMelting point = 413–415 K
Hall symbol: -C 2ycMo Kα radiation, λ = 0.71073 Å
a = 27.5064 (5) ÅCell parameters from 19187 reflections
b = 7.3811 (2) Åθ = 0–0°
c = 19.5038 (4) ŵ = 0.08 mm1
β = 117.699 (2)°T = 223 K
V = 3506.02 (15) Å3Block, yellow
Z = 80.30 × 0.20 × 0.15 mm
Nonius KappaCCD diffractometerRint = 0.06
graphiteθmax = 29.1°, θmin = 1.7°
φ and ω scansh = −37→32
19187 measured reflectionsk = −10→10
2507 independent reflectionsl = −25→25
2836 reflections with I > 3σ(I)
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.055H-atom parameters constrained
wR(F2) = 0.065 Method, part 1, Chebychev polynomial, (Watkin, 1994, Prince, 1982) [weight] = 1.0/[A0*T0(x) + A1*T1(x) ··· + An-1]*Tn-1(x)] where Ai are the Chebychev coefficients listed below and x = F /Fmax Method = Robust Weighting (Prince, 1982) W = [weight] * [1-(deltaF/6*sigmaF)2]2 Ai are: 76.3 80.0 28.8 -10.0 -11.5
S = 1.04(Δ/σ)max = 0.0004
2507 reflectionsΔρmax = 0.25 e Å3
235 parametersΔρmin = −0.25 e Å3
0 restraints
xyzUiso*/Ueq
O10.93812 (7)0.1834 (2)0.28604 (9)0.0613
O20.74005 (6)0.9744 (2)0.19252 (11)0.0715
N10.92187 (7)0.2773 (2)0.15267 (10)0.0441
N20.82826 (7)0.4219 (3)0.02002 (10)0.0518
C10.90766 (9)0.2197 (3)0.07668 (13)0.0465
C20.86133 (9)0.2877 (3)0.01157 (13)0.0481
C30.84587 (10)0.2063 (4)−0.06017 (14)0.0600
C40.87638 (12)0.0637 (4)−0.06710 (17)0.0694
C50.92265 (12)0.0009 (4)−0.00312 (18)0.0690
C60.93752 (10)0.0773 (3)0.06788 (16)0.0572
C70.92184 (7)0.4477 (3)0.16870 (12)0.0385
C80.91134 (8)0.5878 (3)0.10725 (12)0.0404
C90.85020 (8)0.6032 (3)0.04950 (12)0.0435
C100.81802 (8)0.6940 (3)0.08532 (11)0.0405
C110.82500 (9)0.8789 (3)0.10081 (14)0.0547
C120.79940 (9)0.9683 (3)0.13693 (15)0.0584
C130.76448 (8)0.8738 (3)0.15756 (14)0.0526
C140.75569 (9)0.6925 (3)0.14123 (13)0.0509
C150.78302 (8)0.6032 (3)0.10597 (12)0.0475
C160.93285 (8)0.4968 (3)0.24729 (12)0.0384
C170.93531 (8)0.6780 (3)0.27066 (12)0.0442
C180.94419 (8)0.7245 (3)0.34386 (13)0.0506
C190.95159 (9)0.5901 (3)0.39714 (13)0.0532
C200.95014 (9)0.4115 (3)0.37696 (13)0.0532
C210.94043 (8)0.3622 (3)0.30257 (13)0.0455
C220.69528 (10)0.8907 (4)0.19955 (17)0.0766
H820.93090.54950.07750.0489*
H810.92440.70790.13090.0491*
H1910.95680.62220.44950.0668*
H910.84710.68090.00550.0540*
H1110.84890.94420.08490.0673*
H1410.73080.62580.15470.0624*
H1510.77630.47300.09420.0604*
H2010.95650.31670.41330.0656*
H510.9445−0.0943−0.00830.0953*
H1710.93050.77350.23340.0558*
H1810.94600.85070.35830.0644*
H210.79270.4133−0.00980.0665*
H410.86600.0108−0.11670.0911*
H1210.80621.09510.14970.0723*
H310.81350.2496−0.10430.0789*
H610.96930.03250.11340.0794*
H2220.68050.98580.22100.1264*
H2230.66830.85140.14730.1269*
H2210.70940.78490.23500.1273*
H110.93220.17250.23850.0949*
U11U22U33U12U13U23
O10.0752 (11)0.0399 (10)0.0615 (10)0.0001 (8)0.0257 (9)0.0135 (8)
O20.0518 (10)0.0654 (12)0.1058 (14)−0.0043 (9)0.0437 (10)−0.0231 (10)
N10.0415 (10)0.0383 (10)0.0543 (11)−0.0021 (8)0.0238 (9)0.0006 (8)
N20.0363 (9)0.0547 (12)0.0585 (12)−0.0069 (9)0.0171 (9)−0.0094 (10)
C10.0465 (12)0.0374 (12)0.0636 (15)−0.0115 (10)0.0324 (12)−0.0060 (11)
C20.0481 (13)0.0476 (13)0.0560 (14)−0.0169 (11)0.0305 (11)−0.0092 (11)
C30.0607 (15)0.0623 (16)0.0641 (16)−0.0240 (13)0.0348 (13)−0.0153 (13)
C40.0840 (19)0.0658 (18)0.0814 (19)−0.0386 (16)0.0579 (17)−0.0348 (16)
C50.0725 (18)0.0542 (16)0.100 (2)−0.0212 (14)0.0570 (18)−0.0257 (16)
C60.0564 (13)0.0436 (13)0.0811 (17)−0.0112 (12)0.0401 (13)−0.0116 (13)
C70.0296 (10)0.0354 (11)0.0507 (12)−0.0019 (8)0.0187 (9)0.0036 (9)
C80.0369 (10)0.0366 (11)0.0494 (12)−0.0043 (9)0.0216 (9)0.0028 (10)
C90.0388 (11)0.0449 (13)0.0442 (12)−0.0031 (10)0.0171 (9)0.0070 (10)
C100.0321 (10)0.0391 (12)0.0441 (12)−0.0001 (9)0.0123 (9)0.0076 (9)
C110.0426 (12)0.0419 (14)0.0816 (17)−0.0022 (10)0.0307 (12)0.0095 (12)
C120.0417 (12)0.0384 (13)0.0939 (19)−0.0027 (10)0.0305 (13)−0.0044 (13)
C130.0370 (12)0.0511 (14)0.0664 (15)0.0017 (11)0.0211 (11)−0.0061 (12)
C140.0436 (12)0.0480 (14)0.0668 (15)−0.0064 (11)0.0304 (11)−0.0008 (12)
C150.0457 (12)0.0391 (12)0.0596 (14)−0.0059 (10)0.0262 (11)0.0006 (11)
C160.0296 (10)0.0379 (11)0.0459 (12)0.0015 (8)0.0161 (9)0.0061 (9)
C170.0392 (11)0.0400 (13)0.0526 (13)0.0036 (9)0.0206 (10)0.0063 (10)
C180.0472 (13)0.0501 (13)0.0550 (14)0.0061 (11)0.0242 (11)−0.0012 (11)
C190.0447 (12)0.0661 (16)0.0488 (13)0.0071 (12)0.0217 (11)0.0046 (12)
C200.0476 (13)0.0612 (15)0.0501 (13)0.0048 (12)0.0221 (11)0.0162 (12)
C210.0369 (11)0.0418 (12)0.0544 (13)0.0019 (10)0.0182 (10)0.0107 (11)
C220.0595 (15)0.087 (2)0.097 (2)−0.0058 (16)0.0485 (16)−0.0176 (18)
O1—C211.353 (2)C9—H911.002
O1—H110.867C10—C111.392 (3)
O2—C131.376 (3)C10—C151.378 (3)
O2—C221.440 (3)C11—C121.374 (3)
N1—C11.411 (3)C11—H1110.975
N1—C71.297 (3)C12—C131.389 (3)
N2—C21.405 (3)C12—H1210.964
N2—C91.470 (3)C13—C141.371 (3)
N2—H210.877C14—C151.397 (3)
C1—C21.409 (3)C14—H1410.972
C1—C61.393 (3)C15—H1510.986
C2—C31.395 (3)C16—C171.405 (3)
C3—C41.391 (3)C16—C211.409 (3)
C3—H310.960C17—C181.375 (3)
C4—C51.384 (4)C17—H1710.976
C4—H410.956C18—C191.381 (3)
C5—C61.370 (3)C18—H1810.968
C5—H510.960C19—C201.371 (3)
C6—H610.970C19—H1910.993
C7—C81.505 (3)C20—C211.396 (3)
C7—C161.463 (3)C20—H2010.953
C8—C91.533 (3)C22—H2220.997
C8—H820.999C22—H2230.985
C8—H810.987C22—H2210.995
C9—C101.515 (3)
C21—O1—H11108.1C11—C10—C15117.3 (2)
C13—O2—C22116.84 (19)C10—C11—C12122.0 (2)
C1—N1—C7120.97 (18)C10—C11—H111117.5
C2—N2—C9121.12 (16)C12—C11—H111120.5
C2—N2—H21117.0C11—C12—C13119.7 (2)
C9—N2—H21117.0C11—C12—H121120.9
N1—C1—C2122.16 (19)C13—C12—H121119.3
N1—C1—C6117.7 (2)C12—C13—O2115.8 (2)
C2—C1—C6119.7 (2)C12—C13—C14119.6 (2)
C1—C2—N2120.6 (2)O2—C13—C14124.6 (2)
C1—C2—C3118.5 (2)C13—C14—C15119.8 (2)
N2—C2—C3120.6 (2)C13—C14—H141120.1
C2—C3—C4120.4 (3)C15—C14—H141120.1
C2—C3—H31118.6C14—C15—C10121.6 (2)
C4—C3—H31120.9C14—C15—H151119.3
C3—C4—C5120.6 (2)C10—C15—H151119.2
C3—C4—H41119.9C7—C16—C17122.07 (19)
C5—C4—H41119.5C7—C16—C21120.80 (19)
C4—C5—C6119.4 (3)C17—C16—C21117.1 (2)
C4—C5—H51120.6C16—C17—C18122.2 (2)
C6—C5—H51120.0C16—C17—H171118.5
C1—C6—C5121.3 (3)C18—C17—H171119.4
C1—C6—H61118.5C17—C18—C19119.7 (2)
C5—C6—H61120.2C17—C18—H181120.2
N1—C7—C8119.71 (19)C19—C18—H181120.2
N1—C7—C16118.03 (19)C18—C19—C20120.0 (2)
C8—C7—C16122.26 (18)C18—C19—H191120.2
C7—C8—C9112.03 (16)C20—C19—H191119.7
C7—C8—H82108.3C19—C20—C21121.0 (2)
C9—C8—H82107.3C19—C20—H201121.4
C7—C8—H81110.6C21—C20—H201117.5
C9—C8—H81108.3C16—C21—C20120.0 (2)
H82—C8—H81110.3C16—C21—O1122.1 (2)
C8—C9—N2109.30 (17)C20—C21—O1117.9 (2)
C8—C9—C10111.76 (17)O2—C22—H222105.8
N2—C9—C10111.18 (16)O2—C22—H223107.2
C8—C9—H91107.4H222—C22—H223112.5
N2—C9—H91109.2O2—C22—H221109.1
C10—C9—H91107.8H222—C22—H221111.4
C9—C10—C11118.86 (19)H223—C22—H221110.6
C9—C10—C15123.85 (19)
D—H···AD—HH···AD···AD—H···A
O1—H11···N10.871.742.523 (3)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H11⋯N10.871.742.523 (3)148
  6 in total

1.  5-Fluoro-2-methyl-N-[4-(5H-pyrrolo[2,1-c]-[1, 4]benzodiazepin-10(11H)-ylcarbonyl)-3-chlorophenyl]benzamide (VPA-985): an orally active arginine vasopressin antagonist with selectivity for V2 receptors.

Authors:  J D Albright; M F Reich; E G Delos Santos; J P Dusza; F W Sum; A M Venkatesan; J Coupet; P S Chan; X Ru; H Mazandarani; T Bailey
Journal:  J Med Chem       Date:  1998-07-02       Impact factor: 7.446

2.  Circumdatin A, B, and C: Three New Benzodiazepine Alkaloids Isolated from a Culture of the Fungus Aspergillus ochraceus.

Authors:  Lisa Rahbaek; Jens Breinholt; Jens C. Frisvad; Carsten Christophersen
Journal:  J Org Chem       Date:  1999-03-05       Impact factor: 4.354

3.  5-Dichloro-acetyl-4-methyl-2,3,4,5-tetra-hydro-1H-1,5-benzodiazepin-2-one hemihydrate.

Authors:  K Ravichandran; P Sakthivel; S Ponnuswamy; M Shalini; M N Ponnuswamy
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-26

4.  2,2,4-Trimethyl-5-(4-tolyl-sulfon-yl)-2,3,4,5-tetra-hydro-1H-1,5-benzo-diazepine.

Authors:  K Ravichandran; K Sathiyaraj; S S Ilango; S Ponnuswamy; M N Ponnuswamy
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-05

5.  4-Methyl-2-oxo-2,3,4,5-tetra-hydro-1H-1,5-benzodiazepine-5-carbaldehyde.

Authors:  K Ravichandran; P Sakthivel; S Ponnuswamy; P Ramesh; M N Ponnuswamy
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-05

6.  5-Chloro-acetyl-4-methyl-2,3,4,5-tetra-hydro-1H-1,5-benzodiazepin-2-one.

Authors:  K Ravichandran; P Sakthivel; S Ponnuswamy; P Ramesh; M N Ponnuswamy
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-05
  6 in total

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