Literature DB >> 21577830

4-Methyl-2-oxo-2,3,4,5-tetra-hydro-1H-1,5-benzodiazepine-5-carbaldehyde.

K Ravichandran, P Sakthivel, S Ponnuswamy, P Ramesh, M N Ponnuswamy.   

Abstract

In the title compound, C(11)H(12)N(2)O(2), a benzodiazepine derivative, the seven-membered ring adopts a distorted boat conformation. The crystal packing is controlled by inter-molecular N-H⋯O and C-H⋯O inter-actions.

Entities:  

Year:  2009        PMID: 21577830      PMCID: PMC2970231          DOI: 10.1107/S1600536809034825

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the hypnotic effects of benzodiazepines, see: Gringauz (1999 ▶). For their use in the treatment of gastrointestinal and central nervous system disorders, see: Rahbaek et al. (1999 ▶). For other therapeutic applications, see: Albright et al. (1998 ▶); Lee et al. (1999 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For puckering and asymmetry parameters, see: Cremer & Pople (1975 ▶);) ; Nardelli (1983 ▶). For details of the preparation, see: Venkatraj et al. (2008 ▶).

Experimental

Crystal data

C11H12N2O2 M = 204.23 Monoclinic, a = 5.3284 (1) Å b = 12.9387 (4) Å c = 14.6227 (5) Å β = 97.968 (2)° V = 998.39 (5) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.30 × 0.20 × 0.15 mm

Data collection

Bruker Kappa APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2001 ▶) T min = 0.977, T max = 0.986 14697 measured reflections 3727 independent reflections 2453 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.163 S = 1.05 3727 reflections 141 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.40 e Å−3 Δρmin = −0.17 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809034825/bt5041sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809034825/bt5041Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H12N2O2F(000) = 432
Mr = 204.23Dx = 1.359 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2563 reflections
a = 5.3284 (1) Åθ = 2.1–32.9°
b = 12.9387 (4) ŵ = 0.10 mm1
c = 14.6227 (5) ÅT = 293 K
β = 97.968 (2)°Block, colourless
V = 998.39 (5) Å30.30 × 0.20 × 0.15 mm
Z = 4
Bruker Kappa APEXII area-detector diffractometer3727 independent reflections
Radiation source: fine-focus sealed tube2453 reflections with I > 2σ(I)
graphiteRint = 0.028
ω and φ scansθmax = 32.9°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 2001)h = −8→8
Tmin = 0.977, Tmax = 0.986k = −19→19
14697 measured reflectionsl = −22→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.163H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.076P)2 + 0.1596P] where P = (Fo2 + 2Fc2)/3
3727 reflections(Δ/σ)max = 0.004
141 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.5676 (2)0.55730 (10)0.36634 (8)0.0596 (3)
O20.4734 (2)0.15716 (8)0.36319 (8)0.0498 (3)
N10.3101 (2)0.49320 (9)0.24515 (8)0.0411 (3)
H10.395 (4)0.5303 (15)0.2083 (14)0.060 (5)*
C20.3797 (3)0.50642 (10)0.33737 (10)0.0391 (3)
C30.2127 (3)0.45788 (10)0.39982 (9)0.0370 (3)
H3A0.03720.47250.37620.044*
H3B0.24900.48890.46060.044*
C40.2483 (2)0.34179 (10)0.40847 (8)0.0320 (3)
H40.42140.32860.43850.038*
N50.22002 (19)0.29427 (8)0.31600 (7)0.0319 (2)
C60.0534 (2)0.33715 (10)0.24086 (8)0.0313 (3)
C7−0.1530 (3)0.27966 (12)0.19987 (10)0.0421 (3)
H7−0.19120.21680.22560.051*
C8−0.3011 (3)0.31534 (14)0.12141 (11)0.0522 (4)
H8−0.43770.27640.09380.063*
C9−0.2459 (3)0.40821 (15)0.08435 (11)0.0552 (4)
H9−0.34350.43150.03060.066*
C10−0.0470 (3)0.46775 (12)0.12580 (10)0.0479 (4)
H10−0.01380.53150.10060.057*
C110.1037 (2)0.43294 (10)0.20486 (9)0.0343 (3)
C120.0669 (3)0.29350 (14)0.46723 (11)0.0503 (4)
H12A−0.10430.30470.43870.075*
H12B0.09090.32450.52740.075*
H12C0.09900.22060.47280.075*
C130.3356 (3)0.20421 (10)0.30322 (10)0.0388 (3)
H130.30900.17540.24440.047*
U11U22U33U12U13U23
O10.0699 (7)0.0577 (7)0.0464 (7)−0.0305 (6)−0.0085 (5)0.0062 (5)
O20.0557 (6)0.0390 (5)0.0529 (7)0.0129 (4)0.0013 (5)0.0044 (5)
N10.0551 (7)0.0357 (6)0.0325 (6)−0.0110 (5)0.0055 (5)0.0007 (5)
C20.0496 (7)0.0299 (6)0.0359 (7)−0.0042 (5)−0.0012 (5)0.0001 (5)
C30.0445 (7)0.0363 (6)0.0298 (6)0.0006 (5)0.0036 (5)−0.0063 (5)
C40.0333 (5)0.0362 (6)0.0259 (5)−0.0012 (4)0.0019 (4)−0.0012 (5)
N50.0358 (5)0.0295 (5)0.0297 (5)0.0016 (4)0.0026 (4)−0.0011 (4)
C60.0319 (5)0.0347 (6)0.0269 (6)0.0025 (4)0.0027 (4)−0.0038 (5)
C70.0389 (7)0.0466 (8)0.0404 (7)−0.0060 (5)0.0034 (5)−0.0092 (6)
C80.0389 (7)0.0694 (10)0.0453 (8)0.0016 (7)−0.0052 (6)−0.0185 (8)
C90.0544 (9)0.0720 (11)0.0348 (7)0.0229 (8)−0.0100 (6)−0.0063 (7)
C100.0634 (9)0.0443 (8)0.0337 (7)0.0138 (7)−0.0012 (6)0.0021 (6)
C110.0407 (6)0.0338 (6)0.0278 (6)0.0033 (5)0.0027 (5)−0.0041 (5)
C120.0563 (9)0.0571 (9)0.0397 (8)−0.0147 (7)0.0142 (6)0.0001 (7)
C130.0428 (7)0.0298 (6)0.0436 (7)0.0026 (5)0.0055 (5)−0.0019 (5)
O1—C21.2240 (16)C6—C111.3872 (18)
O2—C131.2248 (17)C6—C71.3925 (17)
N1—C21.3589 (18)C7—C81.379 (2)
N1—C111.4088 (17)C7—H70.9300
N1—H10.89 (2)C8—C91.367 (3)
C2—C31.498 (2)C8—H80.9300
C3—C41.5170 (18)C9—C101.381 (2)
C3—H3A0.9700C9—H90.9300
C3—H3B0.9700C10—C111.3881 (18)
C4—N51.4740 (16)C10—H100.9300
C4—C121.5145 (19)C12—H12A0.9600
C4—H40.9800C12—H12B0.9600
N5—C131.3430 (16)C12—H12C0.9600
N5—C61.4259 (15)C13—H130.9300
C2—N1—C11125.06 (12)C8—C7—C6120.40 (14)
C2—N1—H1116.2 (13)C8—C7—H7119.8
C11—N1—H1118.5 (13)C6—C7—H7119.8
O1—C2—N1120.58 (14)C9—C8—C7119.65 (14)
O1—C2—C3122.74 (13)C9—C8—H8120.2
N1—C2—C3116.67 (12)C7—C8—H8120.2
C2—C3—C4112.83 (11)C8—C9—C10120.70 (14)
C2—C3—H3A109.0C8—C9—H9119.6
C4—C3—H3A109.0C10—C9—H9119.6
C2—C3—H3B109.0C9—C10—C11120.32 (15)
C4—C3—H3B109.0C9—C10—H10119.8
H3A—C3—H3B107.8C11—C10—H10119.8
N5—C4—C12110.87 (11)C6—C11—C10119.08 (13)
N5—C4—C3109.94 (10)C6—C11—N1121.10 (11)
C12—C4—C3111.93 (12)C10—C11—N1119.78 (13)
N5—C4—H4108.0C4—C12—H12A109.5
C12—C4—H4108.0C4—C12—H12B109.5
C3—C4—H4108.0H12A—C12—H12B109.5
C13—N5—C6118.62 (11)C4—C12—H12C109.5
C13—N5—C4119.93 (11)H12A—C12—H12C109.5
C6—N5—C4121.21 (10)H12B—C12—H12C109.5
C11—C6—C7119.78 (12)O2—C13—N5124.93 (13)
C11—C6—N5120.50 (10)O2—C13—H13117.5
C7—C6—N5119.61 (12)N5—C13—H13117.5
C11—N1—C2—O1177.36 (14)N5—C6—C7—C8−173.39 (13)
C11—N1—C2—C3−3.9 (2)C6—C7—C8—C9−0.7 (2)
O1—C2—C3—C4−105.49 (15)C7—C8—C9—C10−1.4 (2)
N1—C2—C3—C475.77 (15)C8—C9—C10—C111.4 (2)
C2—C3—C4—N5−52.89 (14)C7—C6—C11—C10−2.81 (19)
C2—C3—C4—C12−176.57 (11)N5—C6—C11—C10173.34 (12)
C12—C4—N5—C13−81.79 (15)C7—C6—C11—N1179.59 (12)
C3—C4—N5—C13153.92 (12)N5—C6—C11—N1−4.25 (18)
C12—C4—N5—C692.50 (14)C9—C10—C11—C60.7 (2)
C3—C4—N5—C6−31.80 (15)C9—C10—C11—N1178.38 (13)
C13—N5—C6—C11−118.66 (14)C2—N1—C11—C6−42.1 (2)
C4—N5—C6—C1166.98 (16)C2—N1—C11—C10140.35 (15)
C13—N5—C6—C757.50 (17)C6—N5—C13—O2−176.50 (13)
C4—N5—C6—C7−116.86 (13)C4—N5—C13—O2−2.1 (2)
C11—C6—C7—C82.8 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1···O2i0.89 (2)2.12 (2)2.9745 (16)161.3 (18)
C13—H13···O1ii0.932.383.2220 (18)150
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O2i0.89 (2)2.12 (2)2.9745 (16)161.3 (18)
C13—H13⋯O1ii0.932.383.2220 (18)150

Symmetry codes: (i) ; (ii) .

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