Literature DB >> 21580024

Isopropyl-aminium 2-carb-oxy-4,5-di-chloro-benzoate.

Graham Smith, Urs D Wermuth.   

Abstract

In the structure of the 1:1 proton-transfer compound of isopropyl-amine with 4,5-dichloro-phthalic acid, C(3)H(10)N(+)·C(8)H(3)Cl(2)O(4) (-), the three cation H-atom donors associate with three separate carboxyl O-atom anion acceptors, giving conjoint cyclic R(4) (4)(12), R(4) (4)(16) hydrogen-bonding cation-anion inter-actions in a one-dimensional ribbon structure. In the anions, the carboxyl groups lie slightly out of the plane of the benzene ring [maximum deviations = 0.439 (1) for a carboxylic acid O atom and 0.433 (1) Å for a carboxyl-ate O atom]. However, the syn-related proton of the carboxylic acid group forms the common short intra-molecular O-H⋯O(carbox-yl) hydrogen bond.

Entities:  

Year:  2009        PMID: 21580024      PMCID: PMC2980220          DOI: 10.1107/S1600536809052672

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures of other hydrogen 4,5-dichloro­phthalate salts, see: Mattes & Dorau (1986 ▶); Mallinson et al. (2003 ▶); Bozkurt et al. (2006 ▶); Odabaşoğlu & Büyükgüngör (2007 ▶); Smith et al. (2007 ▶, 2008a ▶,b ▶, 2009a ▶,b ▶,c ▶); Smith & Wermuth (2010 ▶). For graph-set analysis see: Etter et al. (1990 ▶).

Experimental

Crystal data

C3H10NC8H3Cl2O4 M = 294.12 Monoclinic, a = 5.8362 (7) Å b = 21.040 (2) Å c = 10.3641 (13) Å β = 95.064 (12)° V = 1267.7 (3) Å3 Z = 4 Mo Kα radiation μ = 0.52 mm−1 T = 200 K 0.40 × 0.20 × 0.18 mm

Data collection

Oxford Diffraction Gemini-S CCD detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.942, T max = 0.982 8508 measured reflections 2484 independent reflections 2103 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.070 S = 1.11 2484 reflections 179 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.24 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) within WinGX (Farrugia, 1999 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809052672/sj2696sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809052672/sj2696Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C3H10N+·C8H3Cl2O4F(000) = 608
Mr = 294.12Dx = 1.541 Mg m3
Monoclinic, P21/nMelting point: 533 K
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 5.8362 (7) ÅCell parameters from 3787 reflections
b = 21.040 (2) Åθ = 3.5–28.9°
c = 10.3641 (13) ŵ = 0.52 mm1
β = 95.064 (12)°T = 200 K
V = 1267.7 (3) Å3Prism, colourless
Z = 40.40 × 0.20 × 0.18 mm
Oxford Diffraction Gemini-S CCD detector diffractometer2484 independent reflections
Radiation source: Enhance (Mo) X-ray source2103 reflections with I > 2σ(I)
graphiteRint = 0.020
ω scansθmax = 26.0°, θmin = 3.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −7→7
Tmin = 0.942, Tmax = 0.982k = −25→25
8508 measured reflectionsl = −11→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.070H atoms treated by a mixture of independent and constrained refinement
S = 1.11w = 1/[σ2(Fo2) + (0.0418P)2] where P = (Fo2 + 2Fc2)/3
2484 reflections(Δ/σ)max = 0.001
179 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl4−0.02700 (6)0.21328 (2)0.79371 (4)0.0321 (1)
Cl5−0.07644 (7)0.22223 (2)0.48482 (4)0.0381 (1)
O110.51763 (18)0.06697 (6)0.34762 (10)0.0380 (4)
O120.79781 (18)0.04757 (5)0.49757 (11)0.0363 (4)
O210.85388 (16)0.04986 (5)0.73467 (10)0.0284 (3)
O220.61961 (18)0.05281 (5)0.89173 (10)0.0319 (3)
C10.4642 (2)0.10656 (6)0.55707 (13)0.0208 (4)
C20.4887 (2)0.10301 (6)0.69407 (13)0.0197 (4)
C30.3362 (2)0.13730 (6)0.76294 (14)0.0214 (4)
C40.1622 (2)0.17415 (6)0.70180 (14)0.0230 (4)
C50.1406 (2)0.17807 (6)0.56719 (14)0.0247 (4)
C60.2902 (2)0.14478 (6)0.49726 (14)0.0241 (4)
C110.5991 (2)0.07119 (6)0.46084 (14)0.0250 (4)
C210.6660 (2)0.06527 (6)0.78049 (14)0.0225 (4)
N1A0.8171 (2)0.04013 (6)0.15582 (13)0.0231 (4)
C1A0.9564 (2)0.10018 (7)0.17227 (15)0.0271 (4)
C2A0.7999 (3)0.15688 (8)0.14539 (19)0.0420 (6)
C3A1.1460 (3)0.09810 (8)0.08332 (17)0.0350 (5)
H30.351500.135400.852900.0260*
H60.275100.147800.407400.0290*
H120.821 (4)0.0490 (11)0.594 (3)0.087 (8)*
H1A1.024800.102600.261900.0330*
H11A0.694 (3)0.0418 (8)0.2138 (18)0.040 (5)*
H12A0.907 (3)0.0072 (9)0.1720 (17)0.036 (5)*
H13A0.751 (3)0.0384 (8)0.072 (2)0.037 (5)*
H21A0.681700.156600.204200.0500*
H22A0.730800.154700.057900.0500*
H23A0.887900.195300.157000.0500*
H31A1.241400.061600.103600.0420*
H32A1.237200.136000.094300.0420*
H33A1.080700.09530−0.004800.0420*
U11U22U33U12U13U23
Cl40.0289 (2)0.0304 (2)0.0377 (2)0.0045 (1)0.0069 (2)−0.0040 (2)
Cl50.0363 (2)0.0352 (2)0.0399 (3)0.0086 (2)−0.0133 (2)0.0045 (2)
O110.0356 (6)0.0582 (7)0.0205 (6)−0.0017 (5)0.0050 (5)−0.0080 (5)
O120.0341 (6)0.0470 (6)0.0286 (7)0.0119 (5)0.0069 (5)0.0007 (5)
O210.0221 (5)0.0317 (6)0.0309 (6)0.0035 (4)−0.0002 (4)0.0045 (4)
O220.0368 (6)0.0395 (6)0.0187 (6)0.0064 (4)−0.0014 (4)0.0048 (4)
C10.0216 (7)0.0217 (7)0.0189 (7)−0.0057 (5)0.0008 (5)0.0006 (5)
C20.0196 (6)0.0194 (6)0.0196 (7)−0.0048 (5)−0.0010 (5)0.0012 (5)
C30.0248 (7)0.0226 (7)0.0168 (7)−0.0038 (5)0.0011 (5)0.0007 (5)
C40.0223 (7)0.0200 (7)0.0268 (8)−0.0029 (5)0.0024 (6)−0.0014 (5)
C50.0249 (7)0.0208 (7)0.0268 (8)−0.0018 (5)−0.0069 (6)0.0028 (5)
C60.0275 (7)0.0265 (7)0.0174 (8)−0.0055 (5)−0.0033 (6)0.0021 (5)
C110.0273 (7)0.0268 (7)0.0214 (8)−0.0060 (6)0.0052 (6)0.0006 (6)
C210.0246 (7)0.0208 (7)0.0212 (8)−0.0029 (5)−0.0030 (6)−0.0004 (5)
N1A0.0237 (6)0.0269 (6)0.0183 (7)0.0018 (5)−0.0003 (5)0.0007 (5)
C1A0.0315 (8)0.0281 (7)0.0208 (8)−0.0026 (6)−0.0031 (6)−0.0018 (6)
C2A0.0512 (10)0.0287 (8)0.0474 (11)0.0071 (7)0.0111 (8)−0.0027 (7)
C3A0.0291 (8)0.0354 (8)0.0408 (10)−0.0019 (6)0.0041 (7)0.0071 (7)
Cl4—C41.7292 (14)C2—C31.3908 (18)
Cl5—C51.7337 (14)C3—C41.3858 (18)
O11—C111.2298 (18)C4—C51.392 (2)
O12—C111.2880 (16)C5—C61.3747 (18)
O21—C211.2747 (16)C3—H30.9300
O22—C211.2354 (18)C6—H60.9300
O12—H121.00 (3)C1A—C2A1.513 (2)
N1A—C1A1.5039 (19)C1A—C3A1.502 (2)
N1A—H11A0.977 (18)C1A—H1A0.9800
N1A—H13A0.92 (2)C2A—H21A0.9600
N1A—H12A0.876 (19)C2A—H22A0.9600
C1—C61.3968 (18)C2A—H23A0.9600
C1—C111.5189 (18)C3A—H31A0.9600
C1—C21.4164 (19)C3A—H32A0.9600
C2—C211.5297 (18)C3A—H33A0.9600
C11—O12—H12108.9 (14)O21—C21—C2118.27 (12)
H11A—N1A—H12A111.8 (15)O22—C21—C2117.64 (11)
C1A—N1A—H13A108.5 (11)C2—C3—H3119.00
C1A—N1A—H11A108.6 (10)C4—C3—H3119.00
H11A—N1A—H13A108.2 (16)C1—C6—H6119.00
H12A—N1A—H13A110.1 (16)C5—C6—H6119.00
C1A—N1A—H12A109.5 (12)C2A—C1A—C3A112.05 (14)
C6—C1—C11112.92 (12)N1A—C1A—C2A109.27 (11)
C2—C1—C6118.71 (12)N1A—C1A—C3A109.03 (12)
C2—C1—C11128.32 (11)N1A—C1A—H1A109.00
C1—C2—C21128.14 (11)C2A—C1A—H1A109.00
C1—C2—C3118.33 (12)C3A—C1A—H1A109.00
C3—C2—C21113.53 (12)C1A—C2A—H21A110.00
C2—C3—C4122.13 (13)C1A—C2A—H22A109.00
Cl4—C4—C5121.21 (10)C1A—C2A—H23A109.00
C3—C4—C5119.29 (12)H21A—C2A—H22A109.00
Cl4—C4—C3119.49 (11)H21A—C2A—H23A109.00
Cl5—C5—C4121.52 (10)H22A—C2A—H23A110.00
C4—C5—C6119.51 (12)C1A—C3A—H31A109.00
Cl5—C5—C6118.94 (11)C1A—C3A—H32A110.00
C1—C6—C5122.01 (13)C1A—C3A—H33A109.00
O11—C11—O12121.09 (13)H31A—C3A—H32A109.00
O11—C11—C1118.87 (11)H31A—C3A—H33A109.00
O12—C11—C1120.03 (12)H32A—C3A—H33A109.00
O21—C21—O22124.07 (12)
C6—C1—C2—C30.72 (18)C1—C2—C21—O2122.83 (19)
C6—C1—C2—C21−179.34 (12)C1—C2—C21—O22−158.69 (13)
C11—C1—C2—C3−176.37 (12)C3—C2—C21—O21−157.23 (12)
C11—C1—C2—C213.6 (2)C3—C2—C21—O2221.26 (17)
C2—C1—C6—C5−1.04 (19)C2—C3—C4—Cl4177.78 (10)
C11—C1—C6—C5176.47 (11)C2—C3—C4—C5−1.10 (19)
C2—C1—C11—O11161.01 (13)Cl4—C4—C5—Cl5−0.02 (16)
C2—C1—C11—O12−20.7 (2)Cl4—C4—C5—C6−178.09 (10)
C6—C1—C11—O11−16.22 (17)C3—C4—C5—Cl5178.86 (10)
C6—C1—C11—O12162.10 (12)C3—C4—C5—C60.78 (18)
C1—C2—C3—C40.34 (19)Cl5—C5—C6—C1−177.84 (10)
C21—C2—C3—C4−179.61 (11)C4—C5—C6—C10.29 (19)
D—H···AD—HH···AD···AD—H···A
O12—H12···O211.00 (3)1.45 (3)2.4507 (16)179 (3)
N1A—H11A···O110.977 (18)1.875 (18)2.8175 (17)161.2 (15)
N1A—H12A···O21i0.876 (19)2.021 (18)2.8593 (16)159.6 (16)
N1A—H13A···O22ii0.92 (2)1.98 (2)2.8869 (17)168.8 (15)
C3—H3···O220.932.352.6996 (17)102
C6—H6···O110.932.332.6853 (18)102
C3A—H31A···O22i0.962.543.458 (2)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O12—H12⋯O211.00 (3)1.45 (3)2.4507 (16)179 (3)
N1A—H11A⋯O110.977 (18)1.875 (18)2.8175 (17)161.2 (15)
N1A—H12A⋯O21i0.876 (19)2.021 (18)2.8593 (16)159.6 (16)
N1A—H13A⋯O22ii0.92 (2)1.98 (2)2.8869 (17)168.8 (15)

Symmetry codes: (i) ; (ii) .

  9 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

3.  From weak interactions to covalent bonds: a continuum in the complexes of 1,8-bis(dimethylamino)naphthalene.

Authors:  Paul R Mallinson; Garry T Smith; Chick C Wilson; Eugeniusz Grech; Krzysztof Wozniak
Journal:  J Am Chem Soc       Date:  2003-04-09       Impact factor: 15.419

4.  4-Chloro-anilinium 2-carb-oxy-4,5-dichloro-benzoate.

Authors:  Graham Smith; Urs D Wermuth; Jonathan M White
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-08

5.  Zero-, one- and two-dimensional hydrogen-bonded structures in the 1:1 proton-transfer compounds of 4,5-dichlorophthalic acid with the monocyclic heteroaromatic Lewis bases 2-aminopyrimidine, nicotinamide and isonicotinamide.

Authors:  Graham Smith; Urs D Wermuth; Jonathan M White
Journal:  Acta Crystallogr C       Date:  2009-02-21       Impact factor: 1.172

6.  Two- and three-dimensional hydrogen-bonded structures in the 1:1 proton-transfer compounds of 4,5-dichlorophthalic acid with the isomeric monoaminobenzoic acids.

Authors:  Graham Smith; Urs D Wermuth; Jonathan M White
Journal:  Acta Crystallogr C       Date:  2008-08-29       Impact factor: 1.172

7.  One-dimensional hydrogen-bonded structures in the 1:1 proton-transfer compounds of 4,5-dichlorophthalic acid with 8-hydroxyquinoline, 8-aminoquinoline and quinoline-2-carboxylic acid (quinaldic acid).

Authors:  Graham Smith; Urs D Wermuth; Jonathan M White
Journal:  Acta Crystallogr C       Date:  2008-02-23       Impact factor: 1.172

8.  1,10-Phenanthrolin-1-ium 2-carb-oxy-4,5-dichloro-benzoate.

Authors:  Graham Smith; Urs D Wermuth; Jonathan M White
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-05

9.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  9 in total
  3 in total

1.  4-Methyl-pyridinium 2-carb-oxy-4,5-dichloro-benzoate monohydrate.

Authors:  Graham Smith; Urs D Wermuth
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-08

2.  Ethane-1,2-diaminium 4,5-dichloro-phthalate.

Authors:  Graham Smith; Urs D Wermuth
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-24

3.  tert-Butyl-aminium 2-carb-oxy-4,5-dichloro-benzoate.

Authors:  Graham Smith; Urs D Wermuth
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-27
  3 in total

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