Literature DB >> 22064684

tert-Butyl-aminium 2-carb-oxy-4,5-dichloro-benzoate.

Graham Smith1, Urs D Wermuth.   

Abstract

In the structure of the title anhydrous salt, C(4)H(12)N(+)·C(8)H(3)Cl(2)O(4) (-), the 4,5-dichloro-phthalate monoanions have the common 'planar' conformation with the carboxyl groups close to coplanar with the benzene ring and with a short intra-molecular carb-oxy-lic acid O-H⋯O hydrogen bond. In the crystal, a two-dimensional sheet structure is formed through aminium N-H⋯O(carbox-yl) hydrogen-bonding associations.

Entities:  

Year:  2011        PMID: 22064684      PMCID: PMC3200858          DOI: 10.1107/S1600536811034131

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For structures of 1:1 salts of 4,5-dichloro­phthalic acid with acyclic aliphatic amines, see: Mattes & Dorau (1986 ▶); Bozkurt et al. (2006 ▶); Smith & Wermuth (2010a ▶,b ▶,c ▶).

Experimental

Crystal data

C4H12NC8H3Cl2O4 M = 308.15 Monoclinic, a = 6.1778 (2) Å b = 12.7158 (4) Å c = 17.7125 (7) Å β = 96.784 (4)° V = 1381.68 (8) Å3 Z = 4 Mo Kα radiation μ = 0.48 mm−1 T = 200 K 0.45 × 0.26 × 0.18 mm

Data collection

Oxford Diffraction Gemini-S CCD-detector diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010 ▶) T min = 0.977, T max = 0.990 8677 measured reflections 2719 independent reflections 2307 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.094 S = 0.90 2719 reflections 188 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.25 e Å−3 Δρmin = −0.21 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶) within WinGX (Farrugia, 1999 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811034131/bt5620sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811034131/bt5620Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811034131/bt5620Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C4H12N+·C8H3Cl2O4F(000) = 640
Mr = 308.15Dx = 1.481 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 4272 reflections
a = 6.1778 (2) Åθ = 3.3–28.8°
b = 12.7158 (4) ŵ = 0.48 mm1
c = 17.7125 (7) ÅT = 200 K
β = 96.784 (4)°Plate, colourless
V = 1381.68 (8) Å30.45 × 0.26 × 0.18 mm
Z = 4
Oxford Diffraction Gemini-S CCD-detector diffractometer2719 independent reflections
Radiation source: Enhance (Mo) X-ray source2307 reflections with I > 2σ(I)
graphiteRint = 0.027
Detector resolution: 16.077 pixels mm-1θmax = 26.0°, θmin = 3.4°
ω scansh = −7→7
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010)k = −15→15
Tmin = 0.977, Tmax = 0.990l = −21→21
8677 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.094H atoms treated by a mixture of independent and constrained refinement
S = 0.90w = 1/[σ2(Fo2) + (0.0608P)2 + 0.4558P] where P = (Fo2 + 2Fc2)/3
2719 reflections(Δ/σ)max = 0.001
188 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.21 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.77566 (7)−0.08494 (3)0.92701 (3)0.0313 (1)
Cl20.29591 (7)−0.09103 (3)0.84148 (3)0.0370 (2)
O110.8896 (2)0.29012 (10)1.01297 (8)0.0394 (4)
O120.6289 (2)0.40012 (9)0.97033 (8)0.0353 (4)
O210.2615 (2)0.39679 (10)0.90835 (10)0.0452 (5)
O220.0363 (2)0.28642 (11)0.84456 (9)0.0475 (5)
C10.5836 (3)0.21454 (12)0.93969 (9)0.0218 (5)
C20.3705 (3)0.21275 (13)0.90024 (9)0.0230 (5)
C30.2876 (3)0.11656 (13)0.87218 (10)0.0239 (5)
C40.4066 (3)0.02459 (12)0.87963 (9)0.0233 (5)
C50.6169 (3)0.02693 (12)0.91703 (9)0.0221 (5)
C60.7012 (3)0.12081 (13)0.94635 (9)0.0236 (5)
C110.7102 (3)0.30722 (13)0.97701 (9)0.0268 (5)
C210.2089 (3)0.30285 (14)0.88234 (11)0.0311 (6)
N1A−0.0938 (3)0.54459 (13)0.90362 (9)0.0257 (5)
C1A−0.2152 (3)0.58740 (13)0.83097 (10)0.0255 (5)
C2A−0.0614 (3)0.66054 (18)0.79557 (12)0.0450 (7)
C3A−0.2819 (3)0.49408 (16)0.77986 (11)0.0380 (6)
C4A−0.4120 (3)0.64663 (15)0.85216 (12)0.0373 (6)
H30.146300.114300.847400.0290*
H60.842000.121600.971600.0280*
H210.400 (6)0.399 (3)0.936 (2)0.109 (12)*
H11A0.016 (3)0.5023 (18)0.8953 (12)0.039 (6)*
H12A−0.036 (4)0.5995 (18)0.9325 (13)0.044 (6)*
H13A−0.185 (4)0.5080 (18)0.9289 (13)0.042 (6)*
H21A0.061200.621200.782200.0670*
H22A−0.011400.714500.831400.0670*
H23A−0.136600.692200.750700.0670*
H31A−0.379400.449800.803900.0570*
H32A−0.154600.454600.771200.0570*
H33A−0.353800.518800.732200.0570*
H41A−0.507200.598800.874100.0560*
H42A−0.488300.678100.807400.0560*
H43A−0.365100.700600.888400.0560*
U11U22U33U12U13U23
Cl10.0293 (2)0.0232 (2)0.0394 (3)0.0066 (2)−0.0041 (2)−0.0007 (2)
Cl20.0298 (3)0.0252 (2)0.0534 (3)−0.0039 (2)−0.0061 (2)−0.0113 (2)
O110.0394 (8)0.0314 (7)0.0433 (8)−0.0070 (6)−0.0116 (6)−0.0082 (6)
O120.0367 (7)0.0208 (6)0.0486 (8)−0.0044 (5)0.0059 (6)−0.0061 (5)
O210.0321 (8)0.0228 (7)0.0798 (11)0.0057 (6)0.0025 (8)−0.0041 (7)
O220.0377 (8)0.0409 (8)0.0591 (10)0.0146 (6)−0.0148 (7)−0.0028 (7)
C10.0250 (8)0.0205 (8)0.0198 (8)−0.0024 (6)0.0028 (7)−0.0010 (6)
C20.0228 (8)0.0233 (8)0.0231 (8)0.0017 (6)0.0031 (7)0.0010 (6)
C30.0180 (8)0.0274 (8)0.0257 (8)−0.0004 (7)0.0004 (7)−0.0007 (7)
C40.0231 (8)0.0216 (8)0.0249 (8)−0.0033 (6)0.0012 (7)−0.0026 (7)
C50.0223 (8)0.0213 (8)0.0225 (8)0.0018 (6)0.0018 (6)0.0016 (6)
C60.0204 (8)0.0265 (8)0.0228 (8)−0.0016 (6)−0.0020 (7)−0.0007 (7)
C110.0311 (9)0.0247 (9)0.0251 (9)−0.0068 (7)0.0049 (8)−0.0032 (7)
C210.0316 (10)0.0258 (9)0.0361 (10)0.0067 (7)0.0053 (8)0.0027 (8)
N1A0.0236 (8)0.0251 (8)0.0268 (8)0.0001 (7)−0.0037 (7)−0.0033 (6)
C1A0.0245 (9)0.0262 (9)0.0246 (9)0.0016 (7)−0.0021 (7)−0.0001 (7)
C2A0.0437 (12)0.0542 (13)0.0374 (11)−0.0117 (10)0.0066 (9)0.0081 (10)
C3A0.0385 (11)0.0404 (11)0.0315 (10)0.0050 (9)−0.0108 (8)−0.0097 (8)
C4A0.0328 (10)0.0329 (10)0.0451 (11)0.0079 (8)0.0004 (9)0.0001 (9)
Cl1—C51.7251 (17)C4—C51.387 (3)
Cl2—C41.7253 (16)C5—C61.379 (2)
O11—C111.231 (2)C3—H30.9300
O12—C111.284 (2)C6—H60.9300
O21—C211.307 (2)C1A—C2A1.517 (3)
O22—C211.208 (2)C1A—C3A1.520 (3)
O21—H210.94 (4)C1A—C4A1.515 (3)
N1A—C1A1.512 (2)C2A—H21A0.9600
N1A—H11A0.89 (2)C2A—H22A0.9600
N1A—H13A0.89 (2)C2A—H23A0.9600
N1A—H12A0.91 (2)C3A—H31A0.9600
C1—C111.522 (2)C3A—H32A0.9600
C1—C61.394 (2)C3A—H33A0.9600
C1—C21.416 (3)C4A—H41A0.9600
C2—C31.395 (2)C4A—H42A0.9600
C2—C211.528 (3)C4A—H43A0.9600
C3—C41.379 (2)
Cl1···Cl23.1661 (7)O11···C21v3.217 (2)
Cl1···O11i3.4197 (14)O11···Cl1i3.4197 (14)
Cl1···C3ii3.6461 (18)O11···N1Avi2.784 (2)
Cl2···Cl13.1661 (7)O12···C213.120 (2)
Cl1···H43Aiii2.9200O12···O12vi3.2387 (17)
Cl1···H6i2.8300O12···O212.4021 (19)
Cl2···H22Aiv3.1100O12···N1Av2.861 (2)
O11···O22v3.219 (2)O21···C113.109 (2)
C21—O21—H21113 (2)C4—C3—H3119.00
C1A—N1A—H11A112.8 (14)C1—C6—H6119.00
C1A—N1A—H12A108.9 (14)C5—C6—H6119.00
H11A—N1A—H12A107 (2)C3A—C1A—C4A111.52 (15)
H11A—N1A—H13A108 (2)N1A—C1A—C2A107.49 (15)
C1A—N1A—H13A109.6 (15)N1A—C1A—C3A107.35 (14)
H12A—N1A—H13A110 (2)N1A—C1A—C4A107.46 (15)
C2—C1—C11128.84 (15)C2A—C1A—C3A111.81 (16)
C6—C1—C11112.93 (15)C2A—C1A—C4A110.97 (15)
C2—C1—C6118.24 (15)C1A—C2A—H21A109.00
C1—C2—C21129.57 (15)C1A—C2A—H22A109.00
C1—C2—C3118.09 (15)C1A—C2A—H23A109.00
C3—C2—C21112.35 (16)H21A—C2A—H22A109.00
C2—C3—C4122.71 (17)H21A—C2A—H23A109.00
Cl2—C4—C5120.72 (12)H22A—C2A—H23A109.00
Cl2—C4—C3120.19 (14)C1A—C3A—H31A110.00
C3—C4—C5119.08 (15)C1A—C3A—H32A109.00
Cl1—C5—C4121.35 (12)C1A—C3A—H33A109.00
Cl1—C5—C6119.36 (14)H31A—C3A—H32A109.00
C4—C5—C6119.28 (15)H31A—C3A—H33A109.00
C1—C6—C5122.58 (17)H32A—C3A—H33A109.00
O11—C11—C1118.25 (15)C1A—C4A—H41A109.00
O11—C11—O12121.94 (16)C1A—C4A—H42A109.00
O12—C11—C1119.82 (15)C1A—C4A—H43A109.00
O21—C21—C2118.87 (16)H41A—C4A—H42A110.00
O21—C21—O22121.30 (17)H41A—C4A—H43A109.00
O22—C21—C2119.83 (16)H42A—C4A—H43A109.00
C2—C3—H3119.00
C6—C1—C2—C31.9 (2)C1—C2—C21—O21−3.2 (3)
C6—C1—C2—C21−177.99 (17)C1—C2—C21—O22176.59 (18)
C11—C1—C2—C3−178.68 (16)C3—C2—C21—O21176.90 (17)
C11—C1—C2—C211.4 (3)C3—C2—C21—O22−3.3 (2)
C2—C1—C6—C5−0.9 (2)C2—C3—C4—Cl2−178.43 (14)
C11—C1—C6—C5179.57 (15)C2—C3—C4—C50.5 (3)
C2—C1—C11—O11175.26 (17)Cl2—C4—C5—Cl1−0.1 (2)
C2—C1—C11—O12−4.8 (3)Cl2—C4—C5—C6179.48 (13)
C6—C1—C11—O11−5.3 (2)C3—C4—C5—Cl1−179.02 (13)
C6—C1—C11—O12174.65 (15)C3—C4—C5—C60.5 (2)
C1—C2—C3—C4−1.8 (3)Cl1—C5—C6—C1179.23 (13)
C21—C2—C3—C4178.14 (16)C4—C5—C6—C1−0.3 (3)
D—H···AD—HH···AD···AD—H···A
N1A—H11A···O210.89 (2)2.02 (2)2.883 (2)164 (2)
N1A—H12A···O11vi0.91 (2)1.88 (2)2.784 (2)174 (2)
N1A—H13A···O12vii0.89 (2)1.99 (2)2.861 (2)167 (2)
O21—H21···O120.94 (4)1.47 (4)2.4021 (19)173 (4)
C3—H3···O220.932.292.671 (2)104
C6—H6···O110.932.272.657 (2)104
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1A—H11A⋯O210.89 (2)2.02 (2)2.883 (2)164 (2)
N1A—H12A⋯O11i0.91 (2)1.88 (2)2.784 (2)174 (2)
N1A—H13A⋯O12ii0.89 (2)1.99 (2)2.861 (2)167 (2)
O21—H21⋯O120.94 (4)1.47 (4)2.4021 (19)173 (4)

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Low-dimensional hydrogen-bonded structures in the 1:1 and 1:2 proton-transfer compounds of 4,5-dichlorophthalic acid with the aliphatic Lewis bases triethylamine, diethylamine, n-butylamine and piperidine.

Authors:  Graham Smith; Urs D Wermuth
Journal:  Acta Crystallogr C       Date:  2010-06-23       Impact factor: 1.172

3.  Isopropyl-aminium 2-carb-oxy-4,5-di-chloro-benzoate.

Authors:  Graham Smith; Urs D Wermuth
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-12

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.