Literature DB >> 21579815

N-(3-Methyl-phen-yl)succinamic acid.

B Thimme Gowda, Sabine Foro, B S Saraswathi, Hartmut Fuess.   

Abstract

In the crystal structure of the title compound, C(11)H(13)NO(3), the conformations of the N-H and C=O bonds in the amide segment are anti to each other, and that of the amide H atom is anti to the meta-methyl group in the benzene ring. Furthermore, the conformations of the amide oxygen and the carbonyl O atom of the acid segment are also anti to the adjacent -CH(2) groups. The C=O and O-H bonds of the acid group are syn to each other. In the crystal, the mol-ecules are packed into infinite chains through inter-molecular N-H⋯O and O-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21579815      PMCID: PMC2979942          DOI: 10.1107/S1600536810001480

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For our studies on the effect of ring and side-chain substitutions on the solid-state geometry of anilides, see: Gowda et al. (2007 ▶; 2009 ▶). For the modes of inter­linking carboxylic acids by hydrogen bonds, see: Leiserowitz (1976 ▶). For the packing of mol­ecules involving dimeric hydrogen-bonded association of each carboxyl group with a centrosymmetrically related neighbor, see: Jagannathan et al. (1994 ▶).

Experimental

Crystal data

C11H13NO3 M = 207.22 Orthorhombic, a = 12.0661 (8) Å b = 20.220 (1) Å c = 8.9398 (5) Å V = 2181.1 (2) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 299 K 0.44 × 0.34 × 0.22 mm

Data collection

Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009 ▶) T min = 0.961, T max = 0.980 9274 measured reflections 2228 independent reflections 1772 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.121 S = 1.05 2228 reflections 167 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.18 e Å−3 Δρmin = −0.21 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2009 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810001480/bq2189sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810001480/bq2189Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H13NO3F(000) = 880
Mr = 207.22Dx = 1.262 Mg m3
Orthorhombic, PccnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ab 2acCell parameters from 4700 reflections
a = 12.0661 (8) Åθ = 2.5–27.8°
b = 20.220 (1) ŵ = 0.09 mm1
c = 8.9398 (5) ÅT = 299 K
V = 2181.1 (2) Å3Rod, colourless
Z = 80.44 × 0.34 × 0.22 mm
Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector2228 independent reflections
Radiation source: fine-focus sealed tube1772 reflections with I > 2σ(I)
graphiteRint = 0.019
Rotation method data acquisition using ω and φ scans.θmax = 26.4°, θmin = 3.0°
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009)h = −15→13
Tmin = 0.961, Tmax = 0.980k = −25→25
9274 measured reflectionsl = −9→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.121H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0567P)2 + 0.6529P] where P = (Fo2 + 2Fc2)/3
2228 reflections(Δ/σ)max = 0.029
167 parametersΔρmax = 0.18 e Å3
1 restraintΔρmin = −0.21 e Å3
Experimental. CrysAlis RED (Oxford Diffraction, 2009) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.60319 (12)0.30046 (6)0.00527 (12)0.0586 (4)
O20.51371 (10)0.44029 (6)−0.12328 (15)0.0604 (4)
O30.64575 (11)0.48088 (7)0.02306 (17)0.0681 (4)
H3O0.5948 (14)0.5046 (10)0.056 (3)0.082*
N10.55127 (12)0.24064 (6)−0.19678 (14)0.0449 (3)
H1N0.5651 (14)0.2366 (9)−0.291 (2)0.054*
C10.49463 (12)0.18766 (7)−0.12564 (16)0.0398 (4)
C20.42443 (13)0.19787 (8)−0.00544 (18)0.0456 (4)
H20.4131 (14)0.2440 (10)0.0343 (19)0.055*
C30.37093 (14)0.14509 (9)0.0632 (2)0.0541 (4)
C40.38770 (17)0.08225 (9)0.0064 (2)0.0617 (5)
H40.3523 (18)0.0467 (10)0.052 (2)0.074*
C50.45474 (17)0.07211 (9)−0.1154 (2)0.0627 (5)
H50.4654 (17)0.0287 (11)−0.156 (2)0.075*
C60.50913 (15)0.12444 (8)−0.1827 (2)0.0505 (4)
H60.5552 (15)0.1191 (9)−0.270 (2)0.061*
C70.60056 (13)0.29228 (7)−0.13003 (16)0.0401 (4)
C80.65448 (16)0.34114 (8)−0.23546 (18)0.0470 (4)
H8A0.5993 (15)0.3536 (8)−0.311 (2)0.056*
H8B0.7113 (15)0.3183 (8)−0.285 (2)0.056*
C90.69866 (15)0.40119 (9)−0.1542 (2)0.0514 (4)
H9A0.7504 (17)0.3894 (9)−0.078 (2)0.062*
H9B0.7338 (16)0.4291 (9)−0.223 (2)0.062*
C100.61046 (13)0.44199 (7)−0.08284 (18)0.0449 (4)
C110.2978 (2)0.15574 (12)0.1975 (3)0.0901 (8)
H11A0.22190.15820.16600.108*
H11B0.31830.19620.24620.108*
H11C0.30670.11950.26580.108*
U11U22U33U12U13U23
O10.0916 (10)0.0551 (7)0.0292 (6)−0.0188 (6)0.0069 (6)−0.0009 (5)
O20.0537 (7)0.0579 (7)0.0698 (8)0.0037 (6)−0.0091 (6)−0.0140 (6)
O30.0554 (8)0.0659 (8)0.0831 (10)0.0010 (6)−0.0092 (7)−0.0255 (7)
N10.0613 (8)0.0467 (7)0.0267 (6)−0.0016 (6)0.0071 (6)−0.0018 (5)
C10.0431 (8)0.0422 (8)0.0342 (7)0.0017 (6)−0.0055 (6)0.0014 (6)
C20.0459 (9)0.0474 (8)0.0436 (9)0.0020 (7)0.0020 (7)0.0015 (7)
C30.0424 (9)0.0623 (10)0.0577 (10)−0.0037 (7)0.0012 (8)0.0128 (8)
C40.0574 (11)0.0524 (10)0.0752 (13)−0.0111 (8)−0.0087 (10)0.0160 (9)
C50.0740 (13)0.0417 (9)0.0724 (13)−0.0008 (8)−0.0147 (11)−0.0031 (8)
C60.0569 (10)0.0483 (9)0.0463 (9)0.0059 (7)−0.0047 (8)−0.0042 (7)
C70.0499 (9)0.0410 (7)0.0294 (7)0.0048 (6)0.0062 (6)0.0010 (6)
C80.0560 (10)0.0482 (9)0.0367 (8)0.0014 (7)0.0130 (8)0.0038 (7)
C90.0490 (9)0.0527 (9)0.0525 (10)−0.0063 (8)0.0105 (8)0.0061 (8)
C100.0493 (9)0.0380 (7)0.0473 (9)−0.0073 (6)−0.0001 (7)0.0057 (6)
C110.0777 (14)0.0925 (16)0.0999 (18)−0.0039 (12)0.0402 (13)0.0214 (14)
O1—C71.2212 (17)C4—H40.93 (2)
O2—C101.2226 (19)C5—C61.383 (3)
O3—C101.302 (2)C5—H50.96 (2)
O3—H3O0.832 (10)C6—H60.96 (2)
N1—C71.3416 (19)C7—C81.513 (2)
N1—C11.4210 (19)C8—C91.512 (2)
N1—H1N0.863 (19)C8—H8A0.983 (19)
C1—C21.384 (2)C8—H8B0.940 (19)
C1—C61.387 (2)C9—C101.490 (2)
C2—C31.390 (2)C9—H9A0.95 (2)
C2—H21.008 (19)C9—H9B0.94 (2)
C3—C41.383 (3)C11—H11A0.9600
C3—C111.505 (3)C11—H11B0.9600
C4—C51.372 (3)C11—H11C0.9600
C10—O3—H3O111.1 (16)O1—C7—C8121.17 (14)
C7—N1—C1126.93 (12)N1—C7—C8114.95 (13)
C7—N1—H1N115.0 (12)C9—C8—C7112.13 (13)
C1—N1—H1N117.2 (12)C9—C8—H8A111.4 (10)
C2—C1—C6120.02 (15)C7—C8—H8A107.8 (10)
C2—C1—N1121.97 (13)C9—C8—H8B111.4 (11)
C6—C1—N1117.99 (14)C7—C8—H8B106.8 (11)
C1—C2—C3120.83 (15)H8A—C8—H8B107.1 (15)
C1—C2—H2119.6 (10)C10—C9—C8113.49 (15)
C3—C2—H2119.5 (10)C10—C9—H9A107.6 (12)
C4—C3—C2118.37 (17)C8—C9—H9A111.9 (11)
C4—C3—C11120.66 (17)C10—C9—H9B105.8 (11)
C2—C3—C11120.96 (18)C8—C9—H9B109.0 (11)
C5—C4—C3121.00 (17)H9A—C9—H9B108.8 (16)
C5—C4—H4120.2 (13)O2—C10—O3122.97 (15)
C3—C4—H4118.8 (13)O2—C10—C9122.68 (15)
C4—C5—C6120.73 (17)O3—C10—C9114.33 (15)
C4—C5—H5120.9 (13)C3—C11—H11A109.5
C6—C5—H5118.4 (13)C3—C11—H11B109.5
C5—C6—C1119.01 (17)H11A—C11—H11B109.5
C5—C6—H6122.7 (11)C3—C11—H11C109.5
C1—C6—H6118.2 (11)H11A—C11—H11C109.5
O1—C7—N1123.88 (14)H11B—C11—H11C109.5
C7—N1—C1—C241.4 (2)C2—C1—C6—C5−1.6 (2)
C7—N1—C1—C6−140.25 (16)N1—C1—C6—C5−179.93 (15)
C6—C1—C2—C32.4 (2)C1—N1—C7—O10.1 (3)
N1—C1—C2—C3−179.29 (14)C1—N1—C7—C8−179.98 (14)
C1—C2—C3—C4−1.4 (3)O1—C7—C8—C9−5.6 (2)
C1—C2—C3—C11177.74 (18)N1—C7—C8—C9174.51 (14)
C2—C3—C4—C5−0.5 (3)C7—C8—C9—C10−64.8 (2)
C11—C3—C4—C5−179.61 (19)C8—C9—C10—O2−21.9 (2)
C3—C4—C5—C61.3 (3)C8—C9—C10—O3160.00 (15)
C4—C5—C6—C1−0.3 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O1i0.863 (19)2.02 (2)2.8597 (17)163.5 (16)
O3—H3O···O2ii0.83 (1)1.82 (1)2.6542 (18)177 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O1i0.863 (19)2.02 (2)2.8597 (17)163.5 (16)
O3—H3O⋯O2ii0.83 (1)1.82 (1)2.6542 (18)177 (2)

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N-(4-Chloro-phen-yl)succinamic acid.

Authors:  B Thimme Gowda; Sabine Foro; B S Saraswathi; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-11

3.  N-(2-Chloro-phen-yl)succinamic acid.

Authors:  B Thimme Gowda; Sabine Foro; B S Saraswathi; Hiromitsu Terao; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-28

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total
  6 in total

1.  N-(2-Methyl-phen-yl)succinamic acid.

Authors:  B Thimme Gowda; Sabine Foro; B S Saraswathi; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-24

2.  N-(2,3-Dimethyl-phen-yl)succinamic acid.

Authors:  B S Saraswathi; Sabine Foro; B Thimme Gowda; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-24

3.  N-(3-Chloro-phen-yl)succinamic acid.

Authors:  B Thimme Gowda; Sabine Foro; B S Saraswathi; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-17

4.  N-(3,5-Dimethyl-phen-yl)succinamic acid.

Authors:  B S Saraswathi; Sabine Foro; B Thimme Gowda
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-24

5.  N-(4-Methyl-phen-yl)succinamic acid.

Authors:  B S Saraswathi; Sabine Foro; B Thimme Gowda; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-24

6.  N-(2,5-Dimethyl-phen-yl)succinamic acid monohydrate.

Authors:  B S Saraswathi; Sabine Foro; B Thimme Gowda
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-02
  6 in total

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