Literature DB >> 21580719

N-(2-Methyl-phen-yl)succinamic acid.

B Thimme Gowda, Sabine Foro, B S Saraswathi, Hartmut Fuess.   

Abstract

In the crystal structure of the title compound, C(11)H(13)NO(3), the conformations of the N-H and C=O bonds in the amide segment are anti to each other and that of the amide H atom is syn to the ortho-methyl group in the benzene ring. In the crystal, O-H⋯O interactions lead to carboxylic acid inversion dimers and inter-molecular N-H⋯O hydrogen bonds link the mol-ecules into infinite chains. In addition, the crystal structure exhibits inter-molecular C-H⋯π inter-actions between one of the methyl H atoms and the benzene ring of neighbouring mol-ecules.

Entities:  

Year:  2010        PMID: 21580719      PMCID: PMC2983792          DOI: 10.1107/S1600536810010329

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For our study of the effect of ring and side-chain substitutions on the crystal structures of anilides and for related structures, see: Gowda et al. (2007 ▶; 2009 ▶; 2010 ▶); Jagannathan et al. (1994 ▶). For the modes of inter­linking carboxylic acids by hydrogen bonds, see: Leiserowitz (1976 ▶).

Experimental

Crystal data

C11H13NO3 M = 207.22 Triclinic, a = 4.7756 (9) Å b = 6.1854 (9) Å c = 18.275 (3) Å α = 86.20 (2)° β = 83.02 (1)° γ = 88.45 (2)° V = 534.55 (15) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 299 K 0.40 × 0.12 × 0.06 mm

Data collection

Oxford Diffraction Xcalibur diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009 ▶) T min = 0.963, T max = 0.994 2928 measured reflections 1873 independent reflections 1426 reflections with I > 2σ(I) R int = 0.010

Refinement

R[F 2 > 2σ(F 2)] = 0.060 wR(F 2) = 0.149 S = 1.10 1873 reflections 143 parameters 13 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.33 e Å−3 Δρmin = −0.31 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2009 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810010329/lx2138sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810010329/lx2138Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H13NO3Z = 2
Mr = 207.22F(000) = 220
Triclinic, P1Dx = 1.287 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 4.7756 (9) ÅCell parameters from 1326 reflections
b = 6.1854 (9) Åθ = 3.3–27.7°
c = 18.275 (3) ŵ = 0.09 mm1
α = 86.20 (2)°T = 299 K
β = 83.02 (1)°Needle, colourless
γ = 88.45 (2)°0.40 × 0.12 × 0.06 mm
V = 534.55 (15) Å3
Oxford Diffraction Xcalibur diffractometer1873 independent reflections
Radiation source: fine-focus sealed tube1426 reflections with I > 2σ(I)
graphiteRint = 0.010
Detector resolution: 10.0 pixels mm-1θmax = 25.0°, θmin = 3.3°
φ and ω scansh = −5→4
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009)k = −7→7
Tmin = 0.963, Tmax = 0.994l = −21→21
2928 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.060Hydrogen site location: difference Fourier map
wR(F2) = 0.149H atoms treated by a mixture of independent and constrained refinement
S = 1.10w = 1/[σ2(Fo2) + (0.0463P)2 + 0.4371P] where P = (Fo2 + 2Fc2)/3
1873 reflections(Δ/σ)max < 0.001
143 parametersΔρmax = 0.33 e Å3
13 restraintsΔρmin = −0.31 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.0519 (5)−0.0093 (4)0.80080 (16)0.0415 (7)
C2−0.0898 (6)−0.0197 (5)0.87207 (16)0.0445 (7)
C3−0.0147 (7)−0.1877 (5)0.92098 (19)0.0577 (9)
H3−0.1085−0.19940.96870.069*
C40.1940 (8)−0.3363 (5)0.9006 (2)0.0685 (10)
H40.2402−0.44650.93440.082*
C50.3342 (8)−0.3227 (5)0.8307 (2)0.0648 (10)
H50.4767−0.42270.81700.078*
C60.2631 (7)−0.1594 (5)0.78027 (19)0.0538 (8)
H60.3572−0.15040.73260.065*
C70.1616 (5)0.2852 (5)0.70612 (15)0.0424 (7)
C80.0310 (5)0.4576 (5)0.65761 (16)0.0476 (8)
H8A−0.11930.39420.63540.057*
H8B−0.05210.57100.68800.057*
C90.2412 (6)0.5563 (5)0.59738 (17)0.0504 (8)
H9A0.40440.60010.61920.060*
H9B0.30400.44670.56320.060*
C100.1294 (6)0.7472 (5)0.55537 (16)0.0474 (8)
C11−0.3113 (7)0.1471 (6)0.89617 (19)0.0583 (9)
H11A−0.23520.28940.88580.087*
H11B−0.36830.12410.94830.087*
H11C−0.47160.13400.86990.087*
N1−0.0225 (5)0.1572 (4)0.74871 (14)0.0440 (6)
H1N−0.189 (7)0.181 (6)0.7458 (19)0.066*
O10.4164 (4)0.2708 (4)0.70798 (13)0.0665 (8)
O2−0.0821 (6)0.8479 (5)0.57850 (15)0.0915 (10)
O30.2743 (7)0.8021 (5)0.49406 (15)0.0937 (10)
H3O0.201 (10)0.914 (6)0.474 (3)0.141*
U11U22U33U12U13U23
C10.0352 (14)0.0405 (15)0.0501 (17)−0.0014 (12)−0.0162 (12)0.0080 (13)
C20.0374 (15)0.0466 (17)0.0493 (17)−0.0046 (12)−0.0111 (13)0.0108 (14)
C30.0569 (19)0.056 (2)0.058 (2)−0.0059 (16)−0.0119 (15)0.0210 (16)
C40.078 (2)0.0465 (19)0.081 (3)0.0029 (18)−0.028 (2)0.0240 (18)
C50.068 (2)0.0458 (19)0.082 (3)0.0179 (16)−0.0214 (19)0.0020 (18)
C60.0546 (18)0.0494 (18)0.059 (2)0.0056 (15)−0.0137 (15)−0.0010 (15)
C70.0285 (13)0.0535 (17)0.0441 (16)0.0032 (12)−0.0069 (11)0.0090 (13)
C80.0322 (14)0.0579 (19)0.0505 (18)0.0028 (13)−0.0069 (12)0.0156 (15)
C90.0401 (15)0.0571 (19)0.0502 (18)0.0089 (14)−0.0007 (13)0.0130 (15)
C100.0388 (15)0.0537 (18)0.0463 (17)0.0047 (14)−0.0009 (13)0.0122 (14)
C110.0491 (18)0.066 (2)0.056 (2)0.0067 (16)−0.0015 (15)0.0094 (16)
N10.0280 (11)0.0517 (15)0.0509 (14)0.0021 (11)−0.0099 (10)0.0143 (11)
O10.0273 (10)0.0858 (17)0.0817 (17)0.0013 (10)−0.0105 (10)0.0374 (13)
O20.0759 (17)0.0922 (19)0.0891 (19)0.0379 (15)0.0237 (14)0.0444 (15)
O30.102 (2)0.0900 (19)0.0713 (17)0.0412 (16)0.0292 (15)0.0383 (14)
C1—C61.387 (4)C7—C81.512 (4)
C1—C21.391 (4)C8—C91.506 (4)
C1—N11.423 (3)C8—H8A0.9700
C2—C31.393 (4)C8—H8B0.9700
C2—C111.505 (4)C9—C101.488 (4)
C3—C41.372 (5)C9—H9A0.9700
C3—H30.9300C9—H9B0.9700
C4—C51.367 (5)C10—O21.218 (4)
C4—H40.9300C10—O31.274 (4)
C5—C61.385 (5)C11—H11A0.9600
C5—H50.9300C11—H11B0.9600
C6—H60.9300C11—H11C0.9600
C7—O11.222 (3)N1—H1N0.81 (4)
C7—N11.340 (4)O3—H3O0.85 (2)
C6—C1—C2120.7 (3)C7—C8—H8A109.0
C6—C1—N1120.0 (3)C9—C8—H8B109.0
C2—C1—N1119.3 (3)C7—C8—H8B109.0
C1—C2—C3117.5 (3)H8A—C8—H8B107.8
C1—C2—C11121.4 (2)C10—C9—C8114.1 (2)
C3—C2—C11121.1 (3)C10—C9—H9A108.7
C4—C3—C2121.7 (3)C8—C9—H9A108.7
C4—C3—H3119.1C10—C9—H9B108.7
C2—C3—H3119.1C8—C9—H9B108.7
C5—C4—C3120.2 (3)H9A—C9—H9B107.6
C5—C4—H4119.9O2—C10—O3122.0 (3)
C3—C4—H4119.9O2—C10—C9122.6 (3)
C4—C5—C6119.7 (3)O3—C10—C9115.4 (3)
C4—C5—H5120.1C2—C11—H11A109.5
C6—C5—H5120.1C2—C11—H11B109.5
C5—C6—C1120.1 (3)H11A—C11—H11B109.5
C5—C6—H6119.9C2—C11—H11C109.5
C1—C6—H6119.9H11A—C11—H11C109.5
O1—C7—N1123.0 (2)H11B—C11—H11C109.5
O1—C7—C8121.8 (2)C7—N1—C1124.8 (2)
N1—C7—C8115.1 (2)C7—N1—H1N117 (3)
C9—C8—C7112.8 (2)C1—N1—H1N118 (3)
C9—C8—H8A109.0C10—O3—H3O110 (4)
C6—C1—C2—C3−1.1 (4)N1—C1—C6—C5−179.4 (3)
N1—C1—C2—C3178.7 (3)O1—C7—C8—C917.9 (5)
C6—C1—C2—C11177.5 (3)N1—C7—C8—C9−164.8 (3)
N1—C1—C2—C11−2.7 (4)C7—C8—C9—C10−171.8 (3)
C1—C2—C3—C41.0 (5)C8—C9—C10—O217.7 (5)
C11—C2—C3—C4−177.6 (3)C8—C9—C10—O3−164.0 (3)
C2—C3—C4—C5−0.2 (5)O1—C7—N1—C10.0 (5)
C3—C4—C5—C6−0.6 (6)C8—C7—N1—C1−177.2 (3)
C4—C5—C6—C10.5 (5)C6—C1—N1—C7−48.9 (4)
C2—C1—C6—C50.4 (5)C2—C1—N1—C7131.2 (3)
Cg is the centroid of the C1–C6 ring.
D—H···AD—HH···AD···AD—H···A
N1—H1N···O1i0.81 (4)2.13 (4)2.922 (3)164 (3)
O3—H3O···O2ii0.85 (2)1.82 (2)2.664 (3)173 (5)
C11—H11A···Cgiii0.962.813.596 (4)139
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C1–C6 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O1i0.81 (4)2.13 (4)2.922 (3)164 (3)
O3—H3O⋯O2ii0.85 (2)1.82 (2)2.664 (3)173 (5)
C11—H11ACgiii0.962.813.596 (4)139

Symmetry codes: (i) ; (ii) ; (iii) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N-(3-Methyl-phen-yl)succinamic acid.

Authors:  B Thimme Gowda; Sabine Foro; B S Saraswathi; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-16

3.  N-(2-Chloro-phen-yl)succinamic acid.

Authors:  B Thimme Gowda; Sabine Foro; B S Saraswathi; Hiromitsu Terao; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-28

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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  4 in total

1.  N-Phenyl-succinamic acid.

Authors:  B Thimme Gowda; Sabine Foro; B S Saraswathi; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-08

2.  N-(2,3-Dimethyl-phen-yl)succinamic acid.

Authors:  B S Saraswathi; Sabine Foro; B Thimme Gowda; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-24

3.  N-(4-Methyl-phen-yl)succinamic acid.

Authors:  B S Saraswathi; Sabine Foro; B Thimme Gowda; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-24

4.  N-(2,5-Dimethyl-phen-yl)succinamic acid monohydrate.

Authors:  B S Saraswathi; Sabine Foro; B Thimme Gowda
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-02
  4 in total

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